CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1265I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31265S1265IS2083InonsynaGtaTt2942910.9897966512-6514
ORF1ab/nsp31265S1265IS2083InonsynaGTaTA29420.006802726512-6514
ORF1ab/nsp31265S1265IS2083InonsynaGTaTC29410.003401366512-6514

Details of the mutation S1265I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31265S1265IaGtaTt291294All0.000056
ORF1ab/nsp31265S1265IaGTaTA2294All0
ORF1ab/nsp31265S1265IaGTaTC1294All0
ORF1ab/nsp31265S1265IaGtaTt5050AY.40.000078
ORF1ab/nsp31265S1265IaGtaTt4343B.1.1600.001341
ORF1ab/nsp31265S1265IaGtaTt3333B.1.1.70.00003
ORF1ab/nsp31265S1265IaGtaTt1414B.1.10.000254
ORF1ab/nsp31265S1265IaGtaTt1213B.10.00011
ORF1ab/nsp31265S1265IaGTaTC113B.10.000009
ORF1ab/nsp31265S1265IaGtaTt1112AY.1030.000068
ORF1ab/nsp31265S1265IaGTaTA112AY.1030.000006
ORF1ab/nsp31265S1265IaGtaTt1010B.1.1.2940.012658
ORF1ab/nsp31265S1265IaGtaTt99AY.430.00004
ORF1ab/nsp31265S1265IaGtaTt88B.1.20.00007
ORF1ab/nsp31265S1265IaGtaTt88B.1.617.20.00003
ORF1ab/nsp31265S1265IaGtaTt88C.140.034632
ORF1ab/nsp31265S1265IaGtaTt66B.1.1.2160.005343
ORF1ab/nsp31265S1265IaGtaTt45AY.440.000024
ORF1ab/nsp31265S1265IaGTaTA15AY.440.000006
ORF1ab/nsp31265S1265IaGtaTt44AY.30.00004
ORF1ab/nsp31265S1265IaGtaTt44B.1.4290.000094
ORF1ab/nsp31265S1265IaGtaTt44B.1.5750.001214
ORF1ab/nsp31265S1265IaGtaTt44B.230.011696
ORF1ab/nsp31265S1265IaGtaTt33AY.1020.00008
ORF1ab/nsp31265S1265IaGtaTt33AY.390.000074
ORF1ab/nsp31265S1265IaGtaTt33AY.610.000314
ORF1ab/nsp31265S1265IaGtaTt33B.1.1.5190.000119
ORF1ab/nsp31265S1265IaGtaTt33B.1.2210.000213
ORF1ab/nsp31265S1265IaGtaTt22A.2.50.000998
ORF1ab/nsp31265S1265IaGtaTt22AY.50.000041
ORF1ab/nsp31265S1265IaGtaTt22AY.740.000231
ORF1ab/nsp31265S1265IaGtaTt22B0.000256
ORF1ab/nsp31265S1265IaGtaTt22B.1.1770.000026
ORF1ab/nsp31265S1265IaGtaTt22P.10.000032
ORF1ab/nsp31265S1265IaGtaTt11AY.1060.000335
ORF1ab/nsp31265S1265IaGtaTt11AY.1210.000135
ORF1ab/nsp31265S1265IaGtaTt11AY.16.10.00047
ORF1ab/nsp31265S1265IaGtaTt11AY.250.000006
ORF1ab/nsp31265S1265IaGtaTt11AY.260.000028
ORF1ab/nsp31265S1265IaGtaTt11AY.290.000016
ORF1ab/nsp31265S1265IaGtaTt11AY.3.10.000085
ORF1ab/nsp31265S1265IaGtaTt11AY.300.000396
ORF1ab/nsp31265S1265IaGtaTt11AY.460.000104
ORF1ab/nsp31265S1265IaGtaTt11AY.46.40.000165
ORF1ab/nsp31265S1265IaGtaTt11AY.470.000031
ORF1ab/nsp31265S1265IaGtaTt11AY.60.000041
ORF1ab/nsp31265S1265IaGtaTt11AY.750.000056
ORF1ab/nsp31265S1265IaGtaTt11AY.970.001701
ORF1ab/nsp31265S1265IaGtaTt11B.1.1.1480.008772
ORF1ab/nsp31265S1265IaGtaTt11B.1.1.1940.00495
ORF1ab/nsp31265S1265IaGtaTt11B.1.1.3440.010753
ORF1ab/nsp31265S1265IaGtaTt11B.1.1.4340.000349
ORF1ab/nsp31265S1265IaGtaTt11B.1.177.70.000165
ORF1ab/nsp31265S1265IaGtaTt11B.1.2400.000216
ORF1ab/nsp31265S1265IaGtaTt11B.1.36.270.000763
ORF1ab/nsp31265S1265IaGtaTt11B.1.36.290.000517
ORF1ab/nsp31265S1265IaGtaTt11B.1.3960.000706
ORF1ab/nsp31265S1265IaGtaTt11B.1.4270.00005
ORF1ab/nsp31265S1265IaGtaTt11B.1.4410.009615
ORF1ab/nsp31265S1265IaGtaTt11B.1.4530.003236
ORF1ab/nsp31265S1265IaGtaTt11B.1.4670.04
ORF1ab/nsp31265S1265IaGtaTt11B.1.5030.002488
ORF1ab/nsp31265S1265IaGtaTt11B.1.5950.000261
ORF1ab/nsp31265S1265IaGtaTt11B.1.5960.000087
ORF1ab/nsp31265S1265IaGtaTt11B.1.617.10.000129
ORF1ab/nsp31265S1265IaGtaTt11P.1.140.000048