CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1197S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31197S1197SS2015SsynagCagT212492124916308-6310

Details of the mutation S1197S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31197S1197SagCagT2124921249All0.004064
ORF1ab/nsp31197S1197SagCagT1352113521AY.46.60.976316
ORF1ab/nsp31197S1197SagCagT23552355B.1.1.70.002108
ORF1ab/nsp31197S1197SagCagT856856AY.260.024234
ORF1ab/nsp31197S1197SagCagT680680B.1.1770.008954
ORF1ab/nsp31197S1197SagCagT287287AY.40.000447
ORF1ab/nsp31197S1197SagCagT240240AY.430.001063
ORF1ab/nsp31197S1197SagCagT239239AY.1140.055235
ORF1ab/nsp31197S1197SagCagT225225B.1.360.032828
ORF1ab/nsp31197S1197SagCagT191191B.1.617.20.000719
ORF1ab/nsp31197S1197SagCagT188188B.10.001722
ORF1ab/nsp31197S1197SagCagT183183AY.960.379668
ORF1ab/nsp31197S1197SagCagT183183B.1.1600.005707
ORF1ab/nsp31197S1197SagCagT170170AY.360.025196
ORF1ab/nsp31197S1197SagCagT144144B.1.10.002612
ORF1ab/nsp31197S1197SagCagT135135B.1.1.2280.411585
ORF1ab/nsp31197S1197SagCagT121121AY.920.03476
ORF1ab/nsp31197S1197SagCagT118118B.1.20.001039
ORF1ab/nsp31197S1197SagCagT105105P.10.001654
ORF1ab/nsp31197S1197SagCagT9595AY.1030.00059
ORF1ab/nsp31197S1197SagCagT9393AY.440.000566
ORF1ab/nsp31197S1197SagCagT6868AY.98.10.003293
ORF1ab/nsp31197S1197SagCagT6464AY.450.007788
ORF1ab/nsp31197S1197SagCagT5353B.1.4290.001247
ORF1ab/nsp31197S1197SagCagT4343AY.750.002409
ORF1ab/nsp31197S1197SagCagT4040AY.470.001244
ORF1ab/nsp31197S1197SagCagT3939P.1.140.001864
ORF1ab/nsp31197S1197SagCagT3232B.1.1.3321
ORF1ab/nsp31197S1197SagCagT3232B.1.6210.002833
ORF1ab/nsp31197S1197SagCagT2525B.1.177.770.018155
ORF1ab/nsp31197S1197SagCagT2525C.370.002902
ORF1ab/nsp31197S1197SagCagT2424AY.50.000496
ORF1ab/nsp31197S1197SagCagT2323B.1.5260.000541
ORF1ab/nsp31197S1197SagCagT2121B.1.1.500.014257
ORF1ab/nsp31197S1197SagCagT2020A.10.005637
ORF1ab/nsp31197S1197SagCagT2020B.1.3510.000595
ORF1ab/nsp31197S1197SagCagT1818AY.380.008987
ORF1ab/nsp31197S1197SagCagT1818B.1.428.30.230769
ORF1ab/nsp31197S1197SagCagT1717AY.30.000169
ORF1ab/nsp31197S1197SagCagT1515AY.540.00143
ORF1ab/nsp31197S1197SagCagT1515P.1.100.004042
ORF1ab/nsp31197S1197SagCagT1313AY.4.20.000282
ORF1ab/nsp31197S1197SagCagT1313B.1.177.210.000994
ORF1ab/nsp31197S1197SagCagT1313B.1.3490.009292
ORF1ab/nsp31197S1197SagCagT1212AY.99.20.001106
ORF1ab/nsp31197S1197SagCagT1111Q.10.00139
ORF1ab/nsp31197S1197SagCagT1010AY.1090.007396
ORF1ab/nsp31197S1197SagCagT1010B.1.1.2770.007587
ORF1ab/nsp31197S1197SagCagT1010B.1.4270.000505
ORF1ab/nsp31197S1197SagCagT99B.1.1.3060.003946
ORF1ab/nsp31197S1197SagCagT99B.1.3890.009018
ORF1ab/nsp31197S1197SagCagT88B.1.1.610.070175
ORF1ab/nsp31197S1197SagCagT88B.1.177.460.007346
ORF1ab/nsp31197S1197SagCagT77A.2.50.003493
ORF1ab/nsp31197S1197SagCagT77AY.410.002058
ORF1ab/nsp31197S1197SagCagT77B.1.2340.000924
ORF1ab/nsp31197S1197SagCagT77B.1.2430.000487
ORF1ab/nsp31197S1197SagCagT77B.1.258.170.000728
ORF1ab/nsp31197S1197SagCagT77B.1.2800.05
ORF1ab/nsp31197S1197SagCagT77B.1.36.170.003458
ORF1ab/nsp31197S1197SagCagT77B.1.6370.000512
ORF1ab/nsp31197S1197SagCagT66B.1.1.3260.010563
ORF1ab/nsp31197S1197SagCagT66B.1.2580.000399
ORF1ab/nsp31197S1197SagCagT66B.1.5750.00182
ORF1ab/nsp31197S1197SagCagT66B.1.5950.001566
ORF1ab/nsp31197S1197SagCagT55AY.1200.000186
ORF1ab/nsp31197S1197SagCagT55AY.120.10.001605
ORF1ab/nsp31197S1197SagCagT55AY.230.000349
ORF1ab/nsp31197S1197SagCagT55AY.980.000395
ORF1ab/nsp31197S1197SagCagT55B.1.177.440.002595
ORF1ab/nsp31197S1197SagCagT55B.1.177.600.001092
ORF1ab/nsp31197S1197SagCagT55B.1.177.860.000917
ORF1ab/nsp31197S1197SagCagT55B.1.5090.004329
ORF1ab/nsp31197S1197SagCagT44AY.250.000024
ORF1ab/nsp31197S1197SagCagT44AY.330.000267
ORF1ab/nsp31197S1197SagCagT44AY.4.40.001637
ORF1ab/nsp31197S1197SagCagT44AY.580.00363
ORF1ab/nsp31197S1197SagCagT44AY.810.007968
ORF1ab/nsp31197S1197SagCagT44AY.9.20.000147
ORF1ab/nsp31197S1197SagCagT44B.1.1.3040.011236
ORF1ab/nsp31197S1197SagCagT44B.1.1.370.000771
ORF1ab/nsp31197S1197SagCagT44B.1.1.5260.014184
ORF1ab/nsp31197S1197SagCagT44B.1.1110.0047
ORF1ab/nsp31197S1197SagCagT44B.1.177.230.012945
ORF1ab/nsp31197S1197SagCagT44B.1.2060.003263
ORF1ab/nsp31197S1197SagCagT44B.1.214.20.002398
ORF1ab/nsp31197S1197SagCagT44B.1.2210.000284
ORF1ab/nsp31197S1197SagCagT44B.1.2400.000862
ORF1ab/nsp31197S1197SagCagT44B.1.4560.013072
ORF1ab/nsp31197S1197SagCagT44B.1.4690.01444
ORF1ab/nsp31197S1197SagCagT44B.1.5960.000349
ORF1ab/nsp31197S1197SagCagT44B.1.6000.023392
ORF1ab/nsp31197S1197SagCagT44D.20.0003
ORF1ab/nsp31197S1197SagCagT44P.20.000747
ORF1ab/nsp31197S1197SagCagT33AY.1130.000427
ORF1ab/nsp31197S1197SagCagT33AY.320.001597
ORF1ab/nsp31197S1197SagCagT33AY.460.000312
ORF1ab/nsp31197S1197SagCagT33B.1.1.10.00098
ORF1ab/nsp31197S1197SagCagT33B.1.1.1530.003286
ORF1ab/nsp31197S1197SagCagT33B.1.1.250.001706
ORF1ab/nsp31197S1197SagCagT33B.1.3110.000824
ORF1ab/nsp31197S1197SagCagT33B.1.36.100.014354
ORF1ab/nsp31197S1197SagCagT33B.1.36.80.003
ORF1ab/nsp31197S1197SagCagT33B.1.4250.008982
ORF1ab/nsp31197S1197SagCagT33B.1.5240.004219
ORF1ab/nsp31197S1197SagCagT33B.1.5250.000339
ORF1ab/nsp31197S1197SagCagT33B.1.6090.001438
ORF1ab/nsp31197S1197SagCagT33Q.30.000435
ORF1ab/nsp31197S1197SagCagT22A.2.5.20.003145
ORF1ab/nsp31197S1197SagCagT22AY.1020.000053
ORF1ab/nsp31197S1197SagCagT22AY.370.000632
ORF1ab/nsp31197S1197SagCagT22AY.39.10.000079
ORF1ab/nsp31197S1197SagCagT22AY.4.30.001684
ORF1ab/nsp31197S1197SagCagT22AY.4.50.000215
ORF1ab/nsp31197S1197SagCagT22AY.870.001665
ORF1ab/nsp31197S1197SagCagT22AY.9.10.000167
ORF1ab/nsp31197S1197SagCagT22AY.9.2.10.003953
ORF1ab/nsp31197S1197SagCagT22B0.000256
ORF1ab/nsp31197S1197SagCagT22B.1.1.1980.002937
ORF1ab/nsp31197S1197SagCagT22B.1.1.3720.001377
ORF1ab/nsp31197S1197SagCagT22B.1.1.390.001019
ORF1ab/nsp31197S1197SagCagT22B.1.1.4480.004065
ORF1ab/nsp31197S1197SagCagT22B.1.130.004751
ORF1ab/nsp31197S1197SagCagT22B.1.160.160.001859
ORF1ab/nsp31197S1197SagCagT22B.1.177.170.001642
ORF1ab/nsp31197S1197SagCagT22B.1.1920.018519
ORF1ab/nsp31197S1197SagCagT22B.1.351.20.000605
ORF1ab/nsp31197S1197SagCagT22B.1.351.30.001753
ORF1ab/nsp31197S1197SagCagT22B.1.36.220.002415
ORF1ab/nsp31197S1197SagCagT22B.1.36.290.001035
ORF1ab/nsp31197S1197SagCagT22B.1.36.360.001204
ORF1ab/nsp31197S1197SagCagT22B.1.4110.007407
ORF1ab/nsp31197S1197SagCagT22B.1.4590.008163
ORF1ab/nsp31197S1197SagCagT22B.1.564.10.003155
ORF1ab/nsp31197S1197SagCagT22B.1.5650.001621
ORF1ab/nsp31197S1197SagCagT22B.1.780.017094
ORF1ab/nsp31197S1197SagCagT22B.60.00182
ORF1ab/nsp31197S1197SagCagT22C.160.002121
ORF1ab/nsp31197S1197SagCagT22P.1.170.000324
ORF1ab/nsp31197S1197SagCagT22P.1.20.002312
ORF1ab/nsp31197S1197SagCagT22P.1.70.000639
ORF1ab/nsp31197S1197SagCagT11A.180.05
ORF1ab/nsp31197S1197SagCagT11A.210.00277
ORF1ab/nsp31197S1197SagCagT11A.50.001923
ORF1ab/nsp31197S1197SagCagT11AY.1010.00049
ORF1ab/nsp31197S1197SagCagT11AY.1170.000085
ORF1ab/nsp31197S1197SagCagT11AY.1180.000063
ORF1ab/nsp31197S1197SagCagT11AY.16.10.00047
ORF1ab/nsp31197S1197SagCagT11AY.200.000039
ORF1ab/nsp31197S1197SagCagT11AY.4.2.10.000149
ORF1ab/nsp31197S1197SagCagT11AY.420.00004
ORF1ab/nsp31197S1197SagCagT11AY.46.10.001027
ORF1ab/nsp31197S1197SagCagT11AY.46.50.000198
ORF1ab/nsp31197S1197SagCagT11AY.590.00053
ORF1ab/nsp31197S1197SagCagT11AY.680.000274
ORF1ab/nsp31197S1197SagCagT11AY.75.10.00018
ORF1ab/nsp31197S1197SagCagT11AY.930.000273
ORF1ab/nsp31197S1197SagCagT11B.1.1.1860.003436
ORF1ab/nsp31197S1197SagCagT11B.1.1.1920.002309
ORF1ab/nsp31197S1197SagCagT11B.1.1.2160.00089
ORF1ab/nsp31197S1197SagCagT11B.1.1.280.000311
ORF1ab/nsp31197S1197SagCagT11B.1.1.3030.002762
ORF1ab/nsp31197S1197SagCagT11B.1.1.3180.000302
ORF1ab/nsp31197S1197SagCagT11B.1.1.330.000421
ORF1ab/nsp31197S1197SagCagT11B.1.1.470.005348
ORF1ab/nsp31197S1197SagCagT11B.1.1390.000733
ORF1ab/nsp31197S1197SagCagT11B.1.177.40.000211
ORF1ab/nsp31197S1197SagCagT11B.1.177.560.000668
ORF1ab/nsp31197S1197SagCagT11B.1.177.570.000281
ORF1ab/nsp31197S1197SagCagT11B.1.177.60.000977
ORF1ab/nsp31197S1197SagCagT11B.1.177.730.000566
ORF1ab/nsp31197S1197SagCagT11B.1.177.750.001041
ORF1ab/nsp31197S1197SagCagT11B.1.177.820.000477
ORF1ab/nsp31197S1197SagCagT11B.1.177.830.001481
ORF1ab/nsp31197S1197SagCagT11B.1.1900.01
ORF1ab/nsp31197S1197SagCagT11B.1.2080.04
ORF1ab/nsp31197S1197SagCagT11B.1.2270.047619
ORF1ab/nsp31197S1197SagCagT11B.1.2360.002053
ORF1ab/nsp31197S1197SagCagT11B.1.2410.000812
ORF1ab/nsp31197S1197SagCagT11B.1.2650.001271
ORF1ab/nsp31197S1197SagCagT11B.1.2810.021739
ORF1ab/nsp31197S1197SagCagT11B.1.36.190.009259
ORF1ab/nsp31197S1197SagCagT11B.1.36.240.006173
ORF1ab/nsp31197S1197SagCagT11B.1.3660.004878
ORF1ab/nsp31197S1197SagCagT11B.1.3690.000285
ORF1ab/nsp31197S1197SagCagT11B.1.3910.001127
ORF1ab/nsp31197S1197SagCagT11B.1.3930.028571
ORF1ab/nsp31197S1197SagCagT11B.1.3980.002976
ORF1ab/nsp31197S1197SagCagT11B.1.3990.001934
ORF1ab/nsp31197S1197SagCagT11B.1.4040.001302
ORF1ab/nsp31197S1197SagCagT11B.1.438.10.000107
ORF1ab/nsp31197S1197SagCagT11B.1.4530.003236
ORF1ab/nsp31197S1197SagCagT11B.1.4620.007246
ORF1ab/nsp31197S1197SagCagT11B.1.4920.007042
ORF1ab/nsp31197S1197SagCagT11B.1.5030.002488
ORF1ab/nsp31197S1197SagCagT11B.1.5380.008065
ORF1ab/nsp31197S1197SagCagT11B.1.5460.003704
ORF1ab/nsp31197S1197SagCagT11B.1.5510.00129
ORF1ab/nsp31197S1197SagCagT11B.1.5660.019231
ORF1ab/nsp31197S1197SagCagT11B.1.5820.000491
ORF1ab/nsp31197S1197SagCagT11B.1.5850.027778
ORF1ab/nsp31197S1197SagCagT11B.1.5900.004545
ORF1ab/nsp31197S1197SagCagT11B.1.6060.006024
ORF1ab/nsp31197S1197SagCagT11B.1.617.10.000129
ORF1ab/nsp31197S1197SagCagT11B.1.6280.000352
ORF1ab/nsp31197S1197SagCagT11B.1.6340.003425
ORF1ab/nsp31197S1197SagCagT11B.290.003509
ORF1ab/nsp31197S1197SagCagT11B.6.50.076923
ORF1ab/nsp31197S1197SagCagT11C.230.005814
ORF1ab/nsp31197S1197SagCagT11P.1.150.000232
ORF1ab/nsp31197S1197SagCagT11Q.20.000613