CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 1197 | S1197S | S2015S | syn | agC | agT | 21249 | 21249 | 1 | 6308-6310 |
Details of the mutation S1197S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 21249 | 21249 | All | 0.004064 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 13521 | 13521 | AY.46.6 | 0.976316 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2355 | 2355 | B.1.1.7 | 0.002108 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 856 | 856 | AY.26 | 0.024234 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 680 | 680 | B.1.177 | 0.008954 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 287 | 287 | AY.4 | 0.000447 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 240 | 240 | AY.43 | 0.001063 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 239 | 239 | AY.114 | 0.055235 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 225 | 225 | B.1.36 | 0.032828 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 191 | 191 | B.1.617.2 | 0.000719 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 188 | 188 | B.1 | 0.001722 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 183 | 183 | AY.96 | 0.379668 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 183 | 183 | B.1.160 | 0.005707 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 170 | 170 | AY.36 | 0.025196 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 144 | 144 | B.1.1 | 0.002612 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 135 | 135 | B.1.1.228 | 0.411585 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 121 | 121 | AY.92 | 0.03476 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 118 | 118 | B.1.2 | 0.001039 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 105 | 105 | P.1 | 0.001654 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 95 | 95 | AY.103 | 0.00059 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 93 | 93 | AY.44 | 0.000566 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 68 | 68 | AY.98.1 | 0.003293 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 64 | 64 | AY.45 | 0.007788 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 53 | 53 | B.1.429 | 0.001247 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 43 | 43 | AY.75 | 0.002409 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 40 | 40 | AY.47 | 0.001244 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 39 | 39 | P.1.14 | 0.001864 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 32 | 32 | B.1.1.332 | 1 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 32 | 32 | B.1.621 | 0.002833 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 25 | 25 | B.1.177.77 | 0.018155 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 25 | 25 | C.37 | 0.002902 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 24 | 24 | AY.5 | 0.000496 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 23 | 23 | B.1.526 | 0.000541 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 21 | 21 | B.1.1.50 | 0.014257 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 20 | 20 | A.1 | 0.005637 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 20 | 20 | B.1.351 | 0.000595 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 18 | 18 | AY.38 | 0.008987 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 18 | 18 | B.1.428.3 | 0.230769 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 17 | 17 | AY.3 | 0.000169 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 15 | 15 | AY.54 | 0.00143 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 15 | 15 | P.1.10 | 0.004042 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 13 | 13 | AY.4.2 | 0.000282 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 13 | 13 | B.1.177.21 | 0.000994 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 13 | 13 | B.1.349 | 0.009292 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 12 | 12 | AY.99.2 | 0.001106 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 11 | 11 | Q.1 | 0.00139 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 10 | 10 | AY.109 | 0.007396 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 10 | 10 | B.1.1.277 | 0.007587 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 10 | 10 | B.1.427 | 0.000505 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 9 | 9 | B.1.1.306 | 0.003946 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 9 | 9 | B.1.389 | 0.009018 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 8 | 8 | B.1.1.61 | 0.070175 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 8 | 8 | B.1.177.46 | 0.007346 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 7 | 7 | A.2.5 | 0.003493 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 7 | 7 | AY.41 | 0.002058 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 7 | 7 | B.1.234 | 0.000924 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 7 | 7 | B.1.243 | 0.000487 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 7 | 7 | B.1.258.17 | 0.000728 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 7 | 7 | B.1.280 | 0.05 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 7 | 7 | B.1.36.17 | 0.003458 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 7 | 7 | B.1.637 | 0.000512 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 6 | 6 | B.1.1.326 | 0.010563 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 6 | 6 | B.1.258 | 0.000399 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 6 | 6 | B.1.575 | 0.00182 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 6 | 6 | B.1.595 | 0.001566 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 5 | 5 | AY.120 | 0.000186 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 5 | 5 | AY.120.1 | 0.001605 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 5 | 5 | AY.23 | 0.000349 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 5 | 5 | AY.98 | 0.000395 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 5 | 5 | B.1.177.44 | 0.002595 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 5 | 5 | B.1.177.60 | 0.001092 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 5 | 5 | B.1.177.86 | 0.000917 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 5 | 5 | B.1.509 | 0.004329 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | AY.25 | 0.000024 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | AY.33 | 0.000267 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | AY.4.4 | 0.001637 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | AY.58 | 0.00363 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | AY.81 | 0.007968 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | AY.9.2 | 0.000147 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | B.1.1.304 | 0.011236 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | B.1.1.37 | 0.000771 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | B.1.1.526 | 0.014184 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | B.1.111 | 0.0047 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | B.1.177.23 | 0.012945 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | B.1.206 | 0.003263 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | B.1.214.2 | 0.002398 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | B.1.221 | 0.000284 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | B.1.240 | 0.000862 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | B.1.456 | 0.013072 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | B.1.469 | 0.01444 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | B.1.596 | 0.000349 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | B.1.600 | 0.023392 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | D.2 | 0.0003 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 4 | 4 | P.2 | 0.000747 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 3 | 3 | AY.32 | 0.001597 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 3 | 3 | B.1.1.1 | 0.00098 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 3 | 3 | B.1.1.153 | 0.003286 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 3 | 3 | B.1.1.25 | 0.001706 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 3 | 3 | B.1.311 | 0.000824 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 3 | 3 | B.1.36.10 | 0.014354 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 3 | 3 | B.1.36.8 | 0.003 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 3 | 3 | B.1.425 | 0.008982 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 3 | 3 | B.1.524 | 0.004219 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 3 | 3 | B.1.525 | 0.000339 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 3 | 3 | B.1.609 | 0.001438 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 3 | 3 | Q.3 | 0.000435 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | A.2.5.2 | 0.003145 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | AY.37 | 0.000632 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | AY.4.3 | 0.001684 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | AY.87 | 0.001665 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | AY.9.2.1 | 0.003953 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B | 0.000256 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.1.198 | 0.002937 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.1.372 | 0.001377 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.1.39 | 0.001019 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.1.448 | 0.004065 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.13 | 0.004751 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.160.16 | 0.001859 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.177.17 | 0.001642 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.192 | 0.018519 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.351.2 | 0.000605 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.351.3 | 0.001753 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.36.22 | 0.002415 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.36.29 | 0.001035 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.36.36 | 0.001204 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.411 | 0.007407 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.459 | 0.008163 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.564.1 | 0.003155 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.565 | 0.001621 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.1.78 | 0.017094 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | B.6 | 0.00182 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | C.16 | 0.002121 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | P.1.17 | 0.000324 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | P.1.2 | 0.002312 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | A.18 | 0.05 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | A.21 | 0.00277 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | A.5 | 0.001923 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | AY.20 | 0.000039 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.1.186 | 0.003436 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.1.303 | 0.002762 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.1.47 | 0.005348 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.177.6 | 0.000977 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.190 | 0.01 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.208 | 0.04 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.227 | 0.047619 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.236 | 0.002053 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.281 | 0.021739 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.36.19 | 0.009259 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.36.24 | 0.006173 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.366 | 0.004878 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.391 | 0.001127 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.393 | 0.028571 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.398 | 0.002976 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.399 | 0.001934 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.453 | 0.003236 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.492 | 0.007042 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.503 | 0.002488 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.538 | 0.008065 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.546 | 0.003704 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.566 | 0.019231 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.585 | 0.027778 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.590 | 0.004545 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.606 | 0.006024 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.1.634 | 0.003425 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.29 | 0.003509 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | B.6.5 | 0.076923 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | C.23 | 0.005814 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp3 | 1197 | S1197S | agC | agT | 1 | 1 | Q.2 | 0.000613 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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