CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1087del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31087S1087del1S1905del1deltCtt-t750.7142865978-5980
ORF1ab/nsp31087S1087del1S1905del1deltCTtT-720.2857145978-5980

Details of the mutation S1087del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31087S1087del1tCtt-t57All0.000001
ORF1ab/nsp31087S1087del1tCTtT-27All0
ORF1ab/nsp31087S1087del1tCTtT-220.111111
ORF1ab/nsp31087S1087del1tCtt-t11AY.430.000004
ORF1ab/nsp31087S1087del1tCtt-t11AY.9.20.000037
ORF1ab/nsp31087S1087del1tCtt-t11B.1.1.70.000001
ORF1ab/nsp31087S1087del1tCtt-t11B.1.20.000009
ORF1ab/nsp31087S1087del1tCtt-t11B.1.617.20.000004