CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1087del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31087S1087delS1905deldelTCT---13313315978-5980

Details of the mutation S1087del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31087S1087delTCT---133133All0.000025
ORF1ab/nsp31087S1087delTCT---5151B.1.1.70.000046
ORF1ab/nsp31087S1087delTCT---1010B.1.617.20.000038
ORF1ab/nsp31087S1087delTCT---88AY.40.000012
ORF1ab/nsp31087S1087delTCT---77AY.250.000042
ORF1ab/nsp31087S1087delTCT---77B.1.10.000127
ORF1ab/nsp31087S1087delTCT---55AY.430.000022
ORF1ab/nsp31087S1087delTCT---44AY.440.000024
ORF1ab/nsp31087S1087delTCT---33B.10.000027
ORF1ab/nsp31087S1087delTCT---22AY.9.20.000073
ORF1ab/nsp31087S1087delTCT---22B.1.1770.000026
ORF1ab/nsp31087S1087delTCT---22B.1.20.000018
ORF1ab/nsp31087S1087delTCT---22C.370.000232
ORF1ab/nsp31087S1087delTCT---22P.10.000032
ORF1ab/nsp31087S1087delTCT---11AD.20.000219
ORF1ab/nsp31087S1087delTCT---11AY.1020.000027
ORF1ab/nsp31087S1087delTCT---11AY.1130.000142
ORF1ab/nsp31087S1087delTCT---11AY.290.000016
ORF1ab/nsp31087S1087delTCT---11AY.360.000148
ORF1ab/nsp31087S1087delTCT---11AY.4.30.000842
ORF1ab/nsp31087S1087delTCT---11AY.46.60.000072
ORF1ab/nsp31087S1087delTCT---11AY.5.30.000337
ORF1ab/nsp31087S1087delTCT---11AY.540.000095
ORF1ab/nsp31087S1087delTCT---11AY.610.000105
ORF1ab/nsp31087S1087delTCT---11AY.650.000533
ORF1ab/nsp31087S1087delTCT---11AY.660.00107
ORF1ab/nsp31087S1087delTCT---11AY.670.000464
ORF1ab/nsp31087S1087delTCT---11AY.750.000056
ORF1ab/nsp31087S1087delTCT---11AY.850.000427
ORF1ab/nsp31087S1087delTCT---11AY.98.10.000048
ORF1ab/nsp31087S1087delTCT---11AZ.20.000821
ORF1ab/nsp31087S1087delTCT---11B.1.1.2070.001182
ORF1ab/nsp31087S1087delTCT---11B.1.1.4090.002833
ORF1ab/nsp31087S1087delTCT---11B.1.177.320.00135
ORF1ab/nsp31087S1087delTCT---11B.1.2580.000067
ORF1ab/nsp31087S1087delTCT---11B.1.3510.00003
ORF1ab/nsp31087S1087delTCT---11B.1.416.10.001563
ORF1ab/nsp31087S1087delTCT---11B.1.5260.000024
ORF1ab/nsp31087S1087delTCT---11B.150.017544
ORF1ab/nsp31087S1087delTCT---11C.360.000911
ORF1ab/nsp31087S1087delTCT---11P.1.10.000318
ORF1ab/nsp31087S1087delTCT---11Q.20.000613