CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1087S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31087S1087SS1905SsyntcTtcC2731460.5347995978-5980
ORF1ab/nsp31087S1087SS1905SsyntcTtcG273760.2783885978-5980
ORF1ab/nsp31087S1087SS1905SsyntcTtcA273510.1868135978-5980

Details of the mutation S1087S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31087S1087StcTtcC146273All0.000028
ORF1ab/nsp31087S1087StcTtcG76273All0.000015
ORF1ab/nsp31087S1087StcTtcA51273All0.00001
ORF1ab/nsp31087S1087StcTtcC7474AY.46.50.014683
ORF1ab/nsp31087S1087StcTtcG3131AY.390.000766
ORF1ab/nsp31087S1087StcTtcA2931B.1.10.000526
ORF1ab/nsp31087S1087StcTtcG131B.1.10.000018
ORF1ab/nsp31087S1087StcTtcC131B.1.10.000018
ORF1ab/nsp31087S1087StcTtcA1215B.1.20.000106
ORF1ab/nsp31087S1087StcTtcC315B.1.20.000026
ORF1ab/nsp31087S1087StcTtcG1313AY.430.000058
ORF1ab/nsp31087S1087StcTtcC1010AY.98.10.000484
ORF1ab/nsp31087S1087StcTtcC910B.1.1.70.000008
ORF1ab/nsp31087S1087StcTtcA110B.1.1.70.000001
ORF1ab/nsp31087S1087StcTtcG89B.1.617.20.00003
ORF1ab/nsp31087S1087StcTtcC19B.1.617.20.000004
ORF1ab/nsp31087S1087StcTtcC77AY.46.30.006536
ORF1ab/nsp31087S1087StcTtcC46AY.440.000024
ORF1ab/nsp31087S1087StcTtcG26AY.440.000012
ORF1ab/nsp31087S1087StcTtcG36B.10.000027
ORF1ab/nsp31087S1087StcTtcC26B.10.000018
ORF1ab/nsp31087S1087StcTtcA16B.10.000009
ORF1ab/nsp31087S1087StcTtcG66B.1.4290.000141
ORF1ab/nsp31087S1087StcTtcG44AY.1190.000141
ORF1ab/nsp31087S1087StcTtcC44C.36.30.002269
ORF1ab/nsp31087S1087StcTtcA23AY.250.000012
ORF1ab/nsp31087S1087StcTtcG13AY.250.000006
ORF1ab/nsp31087S1087StcTtcC33AY.420.000121
ORF1ab/nsp31087S1087StcTtcG23AY.750.000112
ORF1ab/nsp31087S1087StcTtcC13AY.750.000056
ORF1ab/nsp31087S1087StcTtcC22AY.290.000032
ORF1ab/nsp31087S1087StcTtcC22AY.460.000208
ORF1ab/nsp31087S1087StcTtcC22AY.70.000392
ORF1ab/nsp31087S1087StcTtcC12AY.9.20.000037
ORF1ab/nsp31087S1087StcTtcG12AY.9.20.000037
ORF1ab/nsp31087S1087StcTtcC12B.1.2430.00007
ORF1ab/nsp31087S1087StcTtcG12B.1.2430.00007
ORF1ab/nsp31087S1087StcTtcC22B.1.4970.00063
ORF1ab/nsp31087S1087StcTtcC22B.1.5800.00813
ORF1ab/nsp31087S1087StcTtcC11AU.10.001266
ORF1ab/nsp31087S1087StcTtcC11AY.1030.000006
ORF1ab/nsp31087S1087StcTtcG11AY.230.00007
ORF1ab/nsp31087S1087StcTtcC11AY.30.00001
ORF1ab/nsp31087S1087StcTtcA11AY.340.000097
ORF1ab/nsp31087S1087StcTtcC11AY.34.10.00051
ORF1ab/nsp31087S1087StcTtcG11AY.40.000002
ORF1ab/nsp31087S1087StcTtcC11AY.4.20.000022
ORF1ab/nsp31087S1087StcTtcC11AY.450.000122
ORF1ab/nsp31087S1087StcTtcC11AY.46.60.000072
ORF1ab/nsp31087S1087StcTtcC11AY.990.001049
ORF1ab/nsp31087S1087StcTtcA11B0.000128
ORF1ab/nsp31087S1087StcTtcG11B.1.1.1740.003378
ORF1ab/nsp31087S1087StcTtcC11B.1.1.250.000569
ORF1ab/nsp31087S1087StcTtcA11B.1.1.2770.000759
ORF1ab/nsp31087S1087StcTtcC11B.1.1.2910.000742
ORF1ab/nsp31087S1087StcTtcA11B.1.1.500.000679
ORF1ab/nsp31087S1087StcTtcC11B.1.1600.000031
ORF1ab/nsp31087S1087StcTtcA11B.1.416.10.001563
ORF1ab/nsp31087S1087StcTtcC11B.1.5820.000491
ORF1ab/nsp31087S1087StcTtcA11B.1.6090.000479
ORF1ab/nsp31087S1087StcTtcC11B.1.9.40.006135
ORF1ab/nsp31087S1087StcTtcC11C.60.037037
ORF1ab/nsp31087S1087StcTtcC11Q.80.000165