CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = S1087F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31087S1087FS1905FnonsyntCttTt262926260.9988595978-5980
ORF1ab/nsp31087S1087FS1905FnonsyntCTtTC262930.001141125978-5980

Details of the mutation S1087F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31087S1087FtCttTt26262629All0.000502
ORF1ab/nsp31087S1087FtCTtTC32629All0.000001
ORF1ab/nsp31087S1087FtCttTt12681268B.1.1.70.001135
ORF1ab/nsp31087S1087FtCttTt296296B.1.1.2320.537205
ORF1ab/nsp31087S1087FtCttTt129129AY.40.000201
ORF1ab/nsp31087S1087FtCttTt6566B.1.617.20.000245
ORF1ab/nsp31087S1087FtCTtTC166B.1.617.20.000004
ORF1ab/nsp31087S1087FtCttTt6565AY.430.000288
ORF1ab/nsp31087S1087FtCttTt5959AY.9.10.00494
ORF1ab/nsp31087S1087FtCttTt3434AY.1030.000211
ORF1ab/nsp31087S1087FtCttTt3333P.10.00052
ORF1ab/nsp31087S1087FtCttTt3232AY.30.000318
ORF1ab/nsp31087S1087FtCttTt3131B.1.20.000273
ORF1ab/nsp31087S1087FtCttTt3030B.1.4290.000706
ORF1ab/nsp31087S1087FtCttTt2727AY.250.000162
ORF1ab/nsp31087S1087FtCttTt2626B.10.000238
ORF1ab/nsp31087S1087FtCttTt2222B.1.5260.000517
ORF1ab/nsp31087S1087FtCttTt2121P.20.003919
ORF1ab/nsp31087S1087FtCttTt2020AY.290.000315
ORF1ab/nsp31087S1087FtCttTt1818AY.360.002668
ORF1ab/nsp31087S1087FtCttTt1818B.1.177.150.011356
ORF1ab/nsp31087S1087FtCttTt1818B.1.177.690.026706
ORF1ab/nsp31087S1087FtCttTt1717B.1.5650.013776
ORF1ab/nsp31087S1087FtCttTt1515B.1.10.000272
ORF1ab/nsp31087S1087FtCttTt1515B.1.1770.000198
ORF1ab/nsp31087S1087FtCttTt1414AY.440.000085
ORF1ab/nsp31087S1087FtCttTt1212B.1.2580.000799
ORF1ab/nsp31087S1087FtCttTt1111Q.80.001814
ORF1ab/nsp31087S1087FtCttTt1010AY.1020.000265
ORF1ab/nsp31087S1087FtCttTt1010Q.10.001263
ORF1ab/nsp31087S1087FtCttTt99AY.380.004493
ORF1ab/nsp31087S1087FtCttTt99AY.390.000222
ORF1ab/nsp31087S1087FtCttTt99AY.420.000362
ORF1ab/nsp31087S1087FtCttTt99AY.740.001041
ORF1ab/nsp31087S1087FtCttTt88B.1.1600.00025
ORF1ab/nsp31087S1087FtCttTt77AY.99.20.000645
ORF1ab/nsp31087S1087FtCttTt77B.1.351.30.006135
ORF1ab/nsp31087S1087FtCttTt77B.1.360.001021
ORF1ab/nsp31087S1087FtCttTt66AD.20.001314
ORF1ab/nsp31087S1087FtCttTt66AY.1050.003859
ORF1ab/nsp31087S1087FtCttTt66AY.1170.000507
ORF1ab/nsp31087S1087FtCttTt66AY.230.000418
ORF1ab/nsp31087S1087FtCttTt66AY.39.10.000238
ORF1ab/nsp31087S1087FtCttTt55AY.1000.00023
ORF1ab/nsp31087S1087FtCttTt55AY.1060.001674
ORF1ab/nsp31087S1087FtCttTt55AY.1190.000177
ORF1ab/nsp31087S1087FtCttTt45AY.260.000113
ORF1ab/nsp31087S1087FtCTtTC15AY.260.000028
ORF1ab/nsp31087S1087FtCttTt55AY.750.00028
ORF1ab/nsp31087S1087FtCttTt55AY.850.002136
ORF1ab/nsp31087S1087FtCttTt55B.1.177.120.000758
ORF1ab/nsp31087S1087FtCttTt55B.1.2400.001078
ORF1ab/nsp31087S1087FtCttTt55B.1.258.220.013333
ORF1ab/nsp31087S1087FtCttTt55B.1.3690.001426
ORF1ab/nsp31087S1087FtCttTt55B.1.438.10.000536
ORF1ab/nsp31087S1087FtCttTt55B.1.6210.000443
ORF1ab/nsp31087S1087FtCttTt44AY.120.001264
ORF1ab/nsp31087S1087FtCttTt44AY.5.40.001107
ORF1ab/nsp31087S1087FtCttTt44AY.90.00027
ORF1ab/nsp31087S1087FtCttTt44B.1.1.280.001245
ORF1ab/nsp31087S1087FtCttTt44B.1.3510.000119
ORF1ab/nsp31087S1087FtCttTt44B.1.5960.000349
ORF1ab/nsp31087S1087FtCttTt44P.1.140.000191
ORF1ab/nsp31087S1087FtCttTt33AY.200.000117
ORF1ab/nsp31087S1087FtCttTt33AY.610.000314
ORF1ab/nsp31087S1087FtCttTt33AY.700.000626
ORF1ab/nsp31087S1087FtCttTt33B.1.258.170.000312
ORF1ab/nsp31087S1087FtCttTt33B.1.36.210.006479
ORF1ab/nsp31087S1087FtCttTt33B.1.466.20.001174
ORF1ab/nsp31087S1087FtCttTt33B.1.5950.000783
ORF1ab/nsp31087S1087FtCttTt33C.350.002322
ORF1ab/nsp31087S1087FtCttTt33P.1.120.001452
ORF1ab/nsp31087S1087FtCttTt22AY.100.00106
ORF1ab/nsp31087S1087FtCttTt22AY.460.000208
ORF1ab/nsp31087S1087FtCttTt22AY.46.60.000144
ORF1ab/nsp31087S1087FtCttTt22AY.470.000062
ORF1ab/nsp31087S1087FtCttTt22AY.50.000041
ORF1ab/nsp31087S1087FtCttTt22AY.830.003448
ORF1ab/nsp31087S1087FtCttTt22B.1.1.2140.000111
ORF1ab/nsp31087S1087FtCttTt22B.1.1.2840.000215
ORF1ab/nsp31087S1087FtCttTt22B.1.1.3070.005063
ORF1ab/nsp31087S1087FtCttTt22B.1.1.370.000386
ORF1ab/nsp31087S1087FtCttTt22B.1.1.4330.002849
ORF1ab/nsp31087S1087FtCttTt22B.1.1.4340.000697
ORF1ab/nsp31087S1087FtCttTt22B.1.1.700.000682
ORF1ab/nsp31087S1087FtCttTt22B.1.177.210.000153
ORF1ab/nsp31087S1087FtCttTt22B.1.177.40.000422
ORF1ab/nsp31087S1087FtCttTt22B.1.177.810.000379
ORF1ab/nsp31087S1087FtCttTt22B.1.2210.000142
ORF1ab/nsp31087S1087FtCttTt22B.1.30.005236
ORF1ab/nsp31087S1087FtCttTt22B.1.4020.019608
ORF1ab/nsp31087S1087FtCTtTC12C.60.037037
ORF1ab/nsp31087S1087FtCttTt12C.60.037037
ORF1ab/nsp31087S1087FtCttTt11AY.1140.000231
ORF1ab/nsp31087S1087FtCttTt11AY.1200.000037
ORF1ab/nsp31087S1087FtCttTt11AY.130.000161
ORF1ab/nsp31087S1087FtCttTt11AY.160.00038
ORF1ab/nsp31087S1087FtCttTt11AY.16.10.00047
ORF1ab/nsp31087S1087FtCttTt11AY.3.10.000085
ORF1ab/nsp31087S1087FtCttTt11AY.330.000067
ORF1ab/nsp31087S1087FtCttTt11AY.39.20.001541
ORF1ab/nsp31087S1087FtCttTt11AY.4.20.000022
ORF1ab/nsp31087S1087FtCttTt11AY.4.50.000107
ORF1ab/nsp31087S1087FtCttTt11AY.46.50.000198
ORF1ab/nsp31087S1087FtCttTt11AY.480.000465
ORF1ab/nsp31087S1087FtCttTt11AY.550.000917
ORF1ab/nsp31087S1087FtCttTt11AY.60.000041
ORF1ab/nsp31087S1087FtCttTt11AY.680.000274
ORF1ab/nsp31087S1087FtCttTt11AY.840.000437
ORF1ab/nsp31087S1087FtCttTt11AY.9.20.000037
ORF1ab/nsp31087S1087FtCttTt11AY.920.000287
ORF1ab/nsp31087S1087FtCttTt11AY.98.10.000048
ORF1ab/nsp31087S1087FtCttTt11B.1.1.1390.022727
ORF1ab/nsp31087S1087FtCttTt11B.1.1.1740.003378
ORF1ab/nsp31087S1087FtCttTt11B.1.1.3060.000438
ORF1ab/nsp31087S1087FtCttTt11B.1.1.3120.001912
ORF1ab/nsp31087S1087FtCttTt11B.1.1.330.000421
ORF1ab/nsp31087S1087FtCttTt11B.1.1.340.013158
ORF1ab/nsp31087S1087FtCttTt11B.1.1.3740.002375
ORF1ab/nsp31087S1087FtCttTt11B.1.1.4090.002833
ORF1ab/nsp31087S1087FtCttTt11B.1.1.4380.05
ORF1ab/nsp31087S1087FtCttTt11B.1.1.4420.018519
ORF1ab/nsp31087S1087FtCttTt11B.1.160.260.002421
ORF1ab/nsp31087S1087FtCttTt11B.1.177.520.001757
ORF1ab/nsp31087S1087FtCttTt11B.1.177.650.000665
ORF1ab/nsp31087S1087FtCttTt11B.1.177.70.000165
ORF1ab/nsp31087S1087FtCttTt11B.1.177.770.000726
ORF1ab/nsp31087S1087FtCttTt11B.1.177.820.000477
ORF1ab/nsp31087S1087FtCttTt11B.1.214.30.007143
ORF1ab/nsp31087S1087FtCttTt11B.1.221.10.002907
ORF1ab/nsp31087S1087FtCttTt11B.1.2390.001221
ORF1ab/nsp31087S1087FtCttTt11B.1.2430.00007
ORF1ab/nsp31087S1087FtCttTt11B.1.3490.000715
ORF1ab/nsp31087S1087FtCttTt11B.1.3570.009524
ORF1ab/nsp31087S1087FtCttTt11B.1.36.100.004785
ORF1ab/nsp31087S1087FtCttTt11B.1.36.290.000517
ORF1ab/nsp31087S1087FtCttTt11B.1.3820.008929
ORF1ab/nsp31087S1087FtCttTt11B.1.4270.00005
ORF1ab/nsp31087S1087FtCttTt11B.1.4970.000315
ORF1ab/nsp31087S1087FtCttTt11B.1.5550.022222
ORF1ab/nsp31087S1087FtCttTt11B.1.6090.000479
ORF1ab/nsp31087S1087FtCttTt11B.1.6230.000536
ORF1ab/nsp31087S1087FtCttTt11B.1.6370.000073
ORF1ab/nsp31087S1087FtCttTt11B.1.930.000934
ORF1ab/nsp31087S1087FtCttTt11B.290.003509
ORF1ab/nsp31087S1087FtCttTt11C.160.00106
ORF1ab/nsp31087S1087FtCttTt11C.360.000911
ORF1ab/nsp31087S1087FtCttTt11C.370.000116
ORF1ab/nsp31087S1087FtCttTt11D.20.000075
ORF1ab/nsp31087S1087FtCttTt11P.1.10.000318
ORF1ab/nsp31087S1087FtCttTt11P.1.100.000269
ORF1ab/nsp31087S1087FtCttTt11P.1.170.000162
ORF1ab/nsp31087S1087FtCttTt11P.1.70.000319
ORF1ab/nsp31087S1087FtCttTt11P.30.001595
ORF1ab/nsp31087S1087FtCttTt11U.30.003861