CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = R646del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3646R646del1R1464del1delcgGcg-1070.74655-4657
ORF1ab/nsp3646R646del1R1464del1delCgg-gg1030.34655-4657

Details of the mutation R646del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3646R646del1cgGcg-710All0.000001
ORF1ab/nsp3646R646del1Cgg-gg310All0.000001
ORF1ab/nsp3646R646del1cgGcg-45B.1.1.70.000004
ORF1ab/nsp3646R646del1Cgg-gg15B.1.1.70.000001
ORF1ab/nsp3646R646del1cgGcg-11AY.250.000006
ORF1ab/nsp3646R646del1Cgg-gg11AY.360.000148
ORF1ab/nsp3646R646del1Cgg-gg11B.1.10.000018
ORF1ab/nsp3646R646del1cgGcg-11B.1.5950.000261
ORF1ab/nsp3646R646del1cgGcg-11P.1.10.000318