CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = R1868del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31868R1868delR2686deldelCGT---13013018321-8323

Details of the mutation R1868del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31868R1868delCGT---130130All0.000025
ORF1ab/nsp31868R1868delCGT---5959B.1.1.70.000053
ORF1ab/nsp31868R1868delCGT---66AY.40.000009
ORF1ab/nsp31868R1868delCGT---66AY.4.50.000645
ORF1ab/nsp31868R1868delCGT---66B.1.1770.000079
ORF1ab/nsp31868R1868delCGT---55AY.430.000022
ORF1ab/nsp31868R1868delCGT---44B.10.000037
ORF1ab/nsp31868R1868delCGT---33B.1.10.000054
ORF1ab/nsp31868R1868delCGT---22AY.250.000012
ORF1ab/nsp31868R1868delCGT---22AY.50.000041
ORF1ab/nsp31868R1868delCGT---22B.1.1.3110.000716
ORF1ab/nsp31868R1868delCGT---22B.1.177.170.001642
ORF1ab/nsp31868R1868delCGT---22B.1.177.870.001456
ORF1ab/nsp31868R1868delCGT---11AD.20.000219
ORF1ab/nsp31868R1868delCGT---11AH.30.003802
ORF1ab/nsp31868R1868delCGT---11AY.1010.00049
ORF1ab/nsp31868R1868delCGT---11AY.1200.000037
ORF1ab/nsp31868R1868delCGT---11AY.190.00114
ORF1ab/nsp31868R1868delCGT---11AY.200.000039
ORF1ab/nsp31868R1868delCGT---11AY.330.000067
ORF1ab/nsp31868R1868delCGT---11AY.600.000938
ORF1ab/nsp31868R1868delCGT---11AY.810.001992
ORF1ab/nsp31868R1868delCGT---11AY.90.000068
ORF1ab/nsp31868R1868delCGT---11B.1.1.1590.004673
ORF1ab/nsp31868R1868delCGT---11B.1.1.2360.006897
ORF1ab/nsp31868R1868delCGT---11B.1.1.3060.000438
ORF1ab/nsp31868R1868delCGT---11B.1.1.3720.000689
ORF1ab/nsp31868R1868delCGT---11B.1.177.100.000878
ORF1ab/nsp31868R1868delCGT---11B.1.177.150.000631
ORF1ab/nsp31868R1868delCGT---11B.1.177.160.000664
ORF1ab/nsp31868R1868delCGT---11B.1.177.180.00116
ORF1ab/nsp31868R1868delCGT---11B.1.177.210.000076
ORF1ab/nsp31868R1868delCGT---11B.1.177.510.004566
ORF1ab/nsp31868R1868delCGT---11B.1.177.630.002703
ORF1ab/nsp31868R1868delCGT---11B.1.177.70.000165
ORF1ab/nsp31868R1868delCGT---11B.1.177.730.000566
ORF1ab/nsp31868R1868delCGT---11B.1.177.90.001332
ORF1ab/nsp31868R1868delCGT---11B.1.36.380.001642
ORF1ab/nsp31868R1868delCGT---11B.1.617.20.000004
ORF1ab/nsp31868R1868delCGT---11B.340.013699
ORF1ab/nsp31868R1868delCGT---11C.170.055556
ORF1ab/nsp31868R1868delCGT---11C.370.000116
ORF1ab/nsp31868R1868delCGT---11P.10.000016
ORF1ab/nsp31868R1868delCGT---11Q.10.000126