CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = R1868R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31868R1868RR2686RsyncgTcgC179117020.9503078321-8323
ORF1ab/nsp31868R1868RR2686RsyncgTcgG1791510.02847578321-8323
ORF1ab/nsp31868R1868RR2686RsyncgTcgA1791310.01730888321-8323
ORF1ab/nsp31868R1868RR2686RsynCgTAgA179160.003350088321-8323
ORF1ab/nsp31868R1868RR2686RsynCgTAgG179110.0005583478321-8323

Details of the mutation R1868R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31868R1868RcgTcgC17021791All0.000326
ORF1ab/nsp31868R1868RcgTcgG511791All0.00001
ORF1ab/nsp31868R1868RcgTcgA311791All0.000006
ORF1ab/nsp31868R1868RCgTAgA61791All0.000001
ORF1ab/nsp31868R1868RCgTAgG11791All0
ORF1ab/nsp31868R1868RcgTcgC488488B.1.5250.055222
ORF1ab/nsp31868R1868RcgTcgC325336B.1.1.70.000291
ORF1ab/nsp31868R1868RcgTcgG8336B.1.1.70.000007
ORF1ab/nsp31868R1868RcgTcgA3336B.1.1.70.000003
ORF1ab/nsp31868R1868RcgTcgC164181AY.40.000255
ORF1ab/nsp31868R1868RcgTcgG17181AY.40.000026
ORF1ab/nsp31868R1868RcgTcgC179179B.1.2340.023618
ORF1ab/nsp31868R1868RcgTcgC147147C.2.10.98
ORF1ab/nsp31868R1868RcgTcgC9797B.1.617.20.000365
ORF1ab/nsp31868R1868RcgTcgC4545C.20.725806
ORF1ab/nsp31868R1868RcgTcgC1636B.10.000147
ORF1ab/nsp31868R1868RcgTcgA936B.10.000082
ORF1ab/nsp31868R1868RCgTAgA636B.10.000055
ORF1ab/nsp31868R1868RcgTcgG436B.10.000037
ORF1ab/nsp31868R1868RCgTAgG136B.10.000009
ORF1ab/nsp31868R1868RcgTcgC2626AY.260.000736
ORF1ab/nsp31868R1868RcgTcgC2426AY.430.000106
ORF1ab/nsp31868R1868RcgTcgG226AY.430.000009
ORF1ab/nsp31868R1868RcgTcgC2525AY.1020.000663
ORF1ab/nsp31868R1868RcgTcgC1921B.1.20.000167
ORF1ab/nsp31868R1868RcgTcgA121B.1.20.000009
ORF1ab/nsp31868R1868RcgTcgG121B.1.20.000009
ORF1ab/nsp31868R1868RcgTcgA814P.10.000126
ORF1ab/nsp31868R1868RcgTcgC614P.10.000095
ORF1ab/nsp31868R1868RcgTcgG1011AY.340.00097
ORF1ab/nsp31868R1868RcgTcgC111AY.340.000097
ORF1ab/nsp31868R1868RcgTcgC910AY.1030.000056
ORF1ab/nsp31868R1868RcgTcgA110AY.1030.000006
ORF1ab/nsp31868R1868RcgTcgC99AY.1200.000335
ORF1ab/nsp31868R1868RcgTcgC99AY.390.000222
ORF1ab/nsp31868R1868RcgTcgC99AY.39.10.000357
ORF1ab/nsp31868R1868RcgTcgC88AY.440.000049
ORF1ab/nsp31868R1868RcgTcgC88B.1.1.10.002614
ORF1ab/nsp31868R1868RcgTcgC66AY.200.000233
ORF1ab/nsp31868R1868RcgTcgC66AY.90.000406
ORF1ab/nsp31868R1868RcgTcgC55B.1.4700.007022
ORF1ab/nsp31868R1868RcgTcgG24AY.250.000012
ORF1ab/nsp31868R1868RcgTcgC24AY.250.000012
ORF1ab/nsp31868R1868RcgTcgC44AY.50.000083
ORF1ab/nsp31868R1868RcgTcgC44AY.750.000224
ORF1ab/nsp31868R1868RcgTcgA34B.1.4270.000151
ORF1ab/nsp31868R1868RcgTcgC14B.1.4270.00005
ORF1ab/nsp31868R1868RcgTcgC44B.1.4290.000094
ORF1ab/nsp31868R1868RcgTcgC33AY.450.000365
ORF1ab/nsp31868R1868RcgTcgC23B.1.10.000036
ORF1ab/nsp31868R1868RcgTcgG13B.1.10.000018
ORF1ab/nsp31868R1868RcgTcgC33B.1.5960.000261
ORF1ab/nsp31868R1868RcgTcgC33C.370.000348
ORF1ab/nsp31868R1868RcgTcgC22AY.10.000791
ORF1ab/nsp31868R1868RcgTcgA12AY.1110.000183
ORF1ab/nsp31868R1868RcgTcgG12AY.1110.000183
ORF1ab/nsp31868R1868RcgTcgC22AY.1190.000071
ORF1ab/nsp31868R1868RcgTcgC22AY.99.20.000184
ORF1ab/nsp31868R1868RcgTcgC22B0.000256
ORF1ab/nsp31868R1868RcgTcgC22B.1.1770.000026
ORF1ab/nsp31868R1868RcgTcgC22B.1.2060.001631
ORF1ab/nsp31868R1868RcgTcgG12B.1.3980.002976
ORF1ab/nsp31868R1868RcgTcgA12B.1.3980.002976
ORF1ab/nsp31868R1868RcgTcgC22P.1.70.000639
ORF1ab/nsp31868R1868RcgTcgC11A.23.10.000704
ORF1ab/nsp31868R1868RcgTcgC11A.280.002646
ORF1ab/nsp31868R1868RcgTcgC11AY.1000.000046
ORF1ab/nsp31868R1868RcgTcgC11AY.1010.00049
ORF1ab/nsp31868R1868RcgTcgC11AY.1080.001103
ORF1ab/nsp31868R1868RcgTcgA11AY.130.000161
ORF1ab/nsp31868R1868RcgTcgC11AY.290.000016
ORF1ab/nsp31868R1868RcgTcgC11AY.30.00001
ORF1ab/nsp31868R1868RcgTcgC11AY.3.10.000085
ORF1ab/nsp31868R1868RcgTcgC11AY.34.10.00051
ORF1ab/nsp31868R1868RcgTcgG11AY.360.000148
ORF1ab/nsp31868R1868RcgTcgC11AY.4.20.000022
ORF1ab/nsp31868R1868RcgTcgC11AY.4.50.000107
ORF1ab/nsp31868R1868RcgTcgC11AY.410.000294
ORF1ab/nsp31868R1868RcgTcgG11AY.420.00004
ORF1ab/nsp31868R1868RcgTcgC11AY.460.000104
ORF1ab/nsp31868R1868RcgTcgC11AY.46.60.000072
ORF1ab/nsp31868R1868RcgTcgC11AY.470.000031
ORF1ab/nsp31868R1868RcgTcgC11AY.610.000105
ORF1ab/nsp31868R1868RcgTcgC11AY.620.000436
ORF1ab/nsp31868R1868RcgTcgC11AY.680.000274
ORF1ab/nsp31868R1868RcgTcgA11AY.790.001211
ORF1ab/nsp31868R1868RcgTcgC11B.1.1.280.000311
ORF1ab/nsp31868R1868RcgTcgC11B.1.1.5190.00004
ORF1ab/nsp31868R1868RcgTcgC11B.1.160.150.00495
ORF1ab/nsp31868R1868RcgTcgA11B.1.177.60.000977
ORF1ab/nsp31868R1868RcgTcgC11B.1.177.750.001041
ORF1ab/nsp31868R1868RcgTcgG11B.1.2220.001692
ORF1ab/nsp31868R1868RcgTcgC11B.1.2430.00007
ORF1ab/nsp31868R1868RcgTcgC11B.1.360.000146
ORF1ab/nsp31868R1868RcgTcgC11B.1.3970.004854
ORF1ab/nsp31868R1868RcgTcgC11B.1.4240.008065
ORF1ab/nsp31868R1868RcgTcgC11B.1.4850.014925
ORF1ab/nsp31868R1868RcgTcgC11B.1.5950.000261
ORF1ab/nsp31868R1868RcgTcgC11B.1.617.10.000129
ORF1ab/nsp31868R1868RcgTcgC11B.1.6230.000536
ORF1ab/nsp31868R1868RcgTcgC11B.1.6370.000073
ORF1ab/nsp31868R1868RcgTcgG11C.230.005814
ORF1ab/nsp31868R1868RcgTcgA11P.1.140.000048