CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = R1449del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31449R1449del1R2267del1delaGaa-a740.5714297064-7066
ORF1ab/nsp31449R1449del1R2267del1delAga-ga720.2857147064-7066
ORF1ab/nsp31449R1449del1R2267del1delAGA-NN710.1428577064-7066

Details of the mutation R1449del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31449R1449del1aGaa-a47All0.000001
ORF1ab/nsp31449R1449del1Aga-ga27All0
ORF1ab/nsp31449R1449del1AGA-NN17All0
ORF1ab/nsp31449R1449del1aGaa-a11B.1.10.000018
ORF1ab/nsp31449R1449del1Aga-ga11B.1.1770.000013
ORF1ab/nsp31449R1449del1aGaa-a11B.1.20.000009
ORF1ab/nsp31449R1449del1AGA-NN11B.1.2210.000071
ORF1ab/nsp31449R1449del1aGaa-a11B.1.360.000146
ORF1ab/nsp31449R1449del1aGaa-a11B.1.36.80.001
ORF1ab/nsp31449R1449del1Aga-ga11R.20.014493