CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = R1449del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31449R1449delR2267deldelAGA---12512517064-7066

Details of the mutation R1449del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31449R1449delAGA---125125All0.000024
ORF1ab/nsp31449R1449delAGA---4848B.1.1.70.000043
ORF1ab/nsp31449R1449delAGA---1111B.1.1770.000145
ORF1ab/nsp31449R1449delAGA---99AY.40.000014
ORF1ab/nsp31449R1449delAGA---77B.10.000064
ORF1ab/nsp31449R1449delAGA---44AY.4.50.00043
ORF1ab/nsp31449R1449delAGA---44AY.430.000018
ORF1ab/nsp31449R1449delAGA---33B.1.2210.000213
ORF1ab/nsp31449R1449delAGA---220.111111
ORF1ab/nsp31449R1449delAGA---22P.10.000032
ORF1ab/nsp31449R1449delAGA---11AD.20.000219
ORF1ab/nsp31449R1449delAGA---11AY.1030.000006
ORF1ab/nsp31449R1449delAGA---11AY.1190.000035
ORF1ab/nsp31449R1449delAGA---11AY.190.00114
ORF1ab/nsp31449R1449delAGA---11AY.30.00001
ORF1ab/nsp31449R1449delAGA---11AY.50.000021
ORF1ab/nsp31449R1449delAGA---11AY.600.000938
ORF1ab/nsp31449R1449delAGA---11B0.000128
ORF1ab/nsp31449R1449delAGA---11B.1.10.000018
ORF1ab/nsp31449R1449delAGA---11B.1.1.510.001718
ORF1ab/nsp31449R1449delAGA---11B.1.1.700.000341
ORF1ab/nsp31449R1449delAGA---11B.1.1600.000031
ORF1ab/nsp31449R1449delAGA---11B.1.160.70.002079
ORF1ab/nsp31449R1449delAGA---11B.1.177.150.000631
ORF1ab/nsp31449R1449delAGA---11B.1.177.210.000076
ORF1ab/nsp31449R1449delAGA---11B.1.177.40.000211
ORF1ab/nsp31449R1449delAGA---11B.1.177.540.000606
ORF1ab/nsp31449R1449delAGA---11B.1.177.570.000281
ORF1ab/nsp31449R1449delAGA---11B.1.177.60.000977
ORF1ab/nsp31449R1449delAGA---11B.1.177.620.001192
ORF1ab/nsp31449R1449delAGA---11B.1.177.70.000165
ORF1ab/nsp31449R1449delAGA---11B.1.177.760.002494
ORF1ab/nsp31449R1449delAGA---11B.1.177.90.001332
ORF1ab/nsp31449R1449delAGA---11B.1.2650.001271
ORF1ab/nsp31449R1449delAGA---11B.1.36.170.000494
ORF1ab/nsp31449R1449delAGA---11B.1.36.180.00042
ORF1ab/nsp31449R1449delAGA---11B.1.4150.014286
ORF1ab/nsp31449R1449delAGA---11B.1.416.10.001563
ORF1ab/nsp31449R1449delAGA---11B.1.5960.000087
ORF1ab/nsp31449R1449delAGA---11B.1.617.20.000004
ORF1ab/nsp31449R1449delAGA---11B.1.6210.000089
ORF1ab/nsp31449R1449delAGA---11B.340.013699
ORF1ab/nsp31449R1449delAGA---11P.1.150.000232
ORF1ab/nsp31449R1449delAGA---11Q.80.000165
ORF1ab/nsp31449R1449delAGA---11U.30.003861