CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = R1449T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31449R1449TR2267TnonsynaGaaCa666617064-7066

Details of the mutation R1449T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31449R1449TaGaaCa6666All0.000013
ORF1ab/nsp31449R1449TaGaaCa1212B.1.1.70.000011
ORF1ab/nsp31449R1449TaGaaCa99AY.40.000014
ORF1ab/nsp31449R1449TaGaaCa55AY.430.000022
ORF1ab/nsp31449R1449TaGaaCa44B.10.000037
ORF1ab/nsp31449R1449TaGaaCa44B.1.10.000073
ORF1ab/nsp31449R1449TaGaaCa44B.1.1770.000053
ORF1ab/nsp31449R1449TaGaaCa44P.1.150.000929
ORF1ab/nsp31449R1449TaGaaCa22AY.390.000049
ORF1ab/nsp31449R1449TaGaaCa22AY.460.000208
ORF1ab/nsp31449R1449TaGaaCa22B0.000256
ORF1ab/nsp31449R1449TaGaaCa11AY.1020.000027
ORF1ab/nsp31449R1449TaGaaCa11AY.1030.000006
ORF1ab/nsp31449R1449TaGaaCa11AY.120.2.10.000498
ORF1ab/nsp31449R1449TaGaaCa11AY.440.000006
ORF1ab/nsp31449R1449TaGaaCa11AY.46.60.000072
ORF1ab/nsp31449R1449TaGaaCa11AY.60.000041
ORF1ab/nsp31449R1449TaGaaCa11AY.70.000196
ORF1ab/nsp31449R1449TaGaaCa11AY.90.000068
ORF1ab/nsp31449R1449TaGaaCa11AY.980.000079
ORF1ab/nsp31449R1449TaGaaCa11B.1.1.10.000327
ORF1ab/nsp31449R1449TaGaaCa11B.1.1.510.001718
ORF1ab/nsp31449R1449TaGaaCa11B.1.160.160.000929
ORF1ab/nsp31449R1449TaGaaCa11B.1.4320.011236
ORF1ab/nsp31449R1449TaGaaCa11B.1.5570.05
ORF1ab/nsp31449R1449TaGaaCa11B.1.617.20.000004
ORF1ab/nsp31449R1449TaGaaCa11B.1.930.000934
ORF1ab/nsp31449R1449TaGaaCa11C.300.001727
ORF1ab/nsp31449R1449TaGaaCa11P.1.120.000484