CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = R1297I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31297R1297IR2115InonsynaGaaTa1308130816608-6610

Details of the mutation R1297I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31297R1297IaGaaTa13081308All0.00025
ORF1ab/nsp31297R1297IaGaaTa620620B.1.1.5230.96875
ORF1ab/nsp31297R1297IaGaaTa131131B.1.1.70.000117
ORF1ab/nsp31297R1297IaGaaTa117117C.380.943548
ORF1ab/nsp31297R1297IaGaaTa5959B.1.617.20.000222
ORF1ab/nsp31297R1297IaGaaTa4848B.1.6040.827586
ORF1ab/nsp31297R1297IaGaaTa3737AY.40.000058
ORF1ab/nsp31297R1297IaGaaTa3131A.23.10.021831
ORF1ab/nsp31297R1297IaGaaTa2323AY.4.50.002472
ORF1ab/nsp31297R1297IaGaaTa2222B.1.20.000194
ORF1ab/nsp31297R1297IaGaaTa1919B.1.10.000345
ORF1ab/nsp31297R1297IaGaaTa1717B.10.000156
ORF1ab/nsp31297R1297IaGaaTa1616AY.1060.005358
ORF1ab/nsp31297R1297IaGaaTa99B.1.1600.000281
ORF1ab/nsp31297R1297IaGaaTa88B.1.5250.000905
ORF1ab/nsp31297R1297IaGaaTa77AY.30.00007
ORF1ab/nsp31297R1297IaGaaTa77AY.430.000031
ORF1ab/nsp31297R1297IaGaaTa77B.1.1310.061404
ORF1ab/nsp31297R1297IaGaaTa66AY.1020.000159
ORF1ab/nsp31297R1297IaGaaTa66AY.9.20.00022
ORF1ab/nsp31297R1297IaGaaTa66B.1.1770.000079
ORF1ab/nsp31297R1297IaGaaTa55AY.1030.000031
ORF1ab/nsp31297R1297IaGaaTa55AY.90.000338
ORF1ab/nsp31297R1297IaGaaTa55B.1.1.5190.000199
ORF1ab/nsp31297R1297IaGaaTa44AY.80.002424
ORF1ab/nsp31297R1297IaGaaTa44AY.99.20.000369
ORF1ab/nsp31297R1297IaGaaTa44C.140.017316
ORF1ab/nsp31297R1297IaGaaTa33AY.470.000093
ORF1ab/nsp31297R1297IaGaaTa22AU.20.004843
ORF1ab/nsp31297R1297IaGaaTa22AY.10.000791
ORF1ab/nsp31297R1297IaGaaTa22AY.1200.000074
ORF1ab/nsp31297R1297IaGaaTa22AY.290.000032
ORF1ab/nsp31297R1297IaGaaTa22AY.440.000012
ORF1ab/nsp31297R1297IaGaaTa22AY.580.001815
ORF1ab/nsp31297R1297IaGaaTa22AY.98.10.000097
ORF1ab/nsp31297R1297IaGaaTa22B.1.1.2940.002532
ORF1ab/nsp31297R1297IaGaaTa22B.1.1.390.001019
ORF1ab/nsp31297R1297IaGaaTa22B.1.160.160.001859
ORF1ab/nsp31297R1297IaGaaTa22B.1.160.200.017857
ORF1ab/nsp31297R1297IaGaaTa22B.1.177.230.006472
ORF1ab/nsp31297R1297IaGaaTa22B.1.177.440.001038
ORF1ab/nsp31297R1297IaGaaTa22B.1.2210.000142
ORF1ab/nsp31297R1297IaGaaTa22B.1.2360.004107
ORF1ab/nsp31297R1297IaGaaTa22B.1.3510.000059
ORF1ab/nsp31297R1297IaGaaTa22C.36.3.10.005435
ORF1ab/nsp31297R1297IaGaaTa22D.20.00015
ORF1ab/nsp31297R1297IaGaaTa22P.10.000032
ORF1ab/nsp31297R1297IaGaaTa22P.1.70.000639
ORF1ab/nsp31297R1297IaGaaTa11A0.000387
ORF1ab/nsp31297R1297IaGaaTa11A.2.5.30.010309
ORF1ab/nsp31297R1297IaGaaTa11AY.1100.000113
ORF1ab/nsp31297R1297IaGaaTa11AY.1140.000231
ORF1ab/nsp31297R1297IaGaaTa11AY.140.000088
ORF1ab/nsp31297R1297IaGaaTa11AY.170.008197
ORF1ab/nsp31297R1297IaGaaTa11AY.190.00114
ORF1ab/nsp31297R1297IaGaaTa11AY.370.000316
ORF1ab/nsp31297R1297IaGaaTa11AY.390.000025
ORF1ab/nsp31297R1297IaGaaTa11AY.460.000104
ORF1ab/nsp31297R1297IaGaaTa11AY.750.000056
ORF1ab/nsp31297R1297IaGaaTa11AY.870.000833
ORF1ab/nsp31297R1297IaGaaTa11B.1.1.1610.003534
ORF1ab/nsp31297R1297IaGaaTa11B.1.1.1760.000439
ORF1ab/nsp31297R1297IaGaaTa11B.1.1.3980.003226
ORF1ab/nsp31297R1297IaGaaTa11B.1.1.700.000341
ORF1ab/nsp31297R1297IaGaaTa11B.1.1110.001175
ORF1ab/nsp31297R1297IaGaaTa11B.1.1460.004237
ORF1ab/nsp31297R1297IaGaaTa11B.1.160.290.004219
ORF1ab/nsp31297R1297IaGaaTa11B.1.160.310.008065
ORF1ab/nsp31297R1297IaGaaTa11B.1.177.280.007407
ORF1ab/nsp31297R1297IaGaaTa11B.1.177.310.011494
ORF1ab/nsp31297R1297IaGaaTa11B.1.177.430.001477
ORF1ab/nsp31297R1297IaGaaTa11B.1.177.570.000281
ORF1ab/nsp31297R1297IaGaaTa11B.1.177.70.000165
ORF1ab/nsp31297R1297IaGaaTa11B.1.2580.000067
ORF1ab/nsp31297R1297IaGaaTa11B.1.36.10.00114
ORF1ab/nsp31297R1297IaGaaTa11B.1.36.350.002604
ORF1ab/nsp31297R1297IaGaaTa11B.1.4560.003268
ORF1ab/nsp31297R1297IaGaaTa11B.1.4590.004082
ORF1ab/nsp31297R1297IaGaaTa11B.1.466.20.000391
ORF1ab/nsp31297R1297IaGaaTa11B.1.5260.000024
ORF1ab/nsp31297R1297IaGaaTa11B.1.5640.000426
ORF1ab/nsp31297R1297IaGaaTa11B.1.5680.001111
ORF1ab/nsp31297R1297IaGaaTa11B.1.5770.000687
ORF1ab/nsp31297R1297IaGaaTa11B.1.5960.000087
ORF1ab/nsp31297R1297IaGaaTa11B.1.5990.00365
ORF1ab/nsp31297R1297IaGaaTa11B.1.6210.000089
ORF1ab/nsp31297R1297IaGaaTa11B.1.6360.006711
ORF1ab/nsp31297R1297IaGaaTa11B.1.6370.000073
ORF1ab/nsp31297R1297IaGaaTa11C.370.000116
ORF1ab/nsp31297R1297IaGaaTa11P.20.000187