CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = Q995del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3995Q995del1Q1813del1delcAgc-g80790.98755702-5704
ORF1ab/nsp3995Q995del1Q1813del1delcaGca-8010.01255702-5704

Details of the mutation Q995del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3995Q995del1cAgc-g7980All0.000015
ORF1ab/nsp3995Q995del1caGca-180All0
ORF1ab/nsp3995Q995del1cAgc-g6666B.1.1.70.000059
ORF1ab/nsp3995Q995del1cAgc-g33B.1.177.820.001432
ORF1ab/nsp3995Q995del1cAgc-g33B.1.3510.000089
ORF1ab/nsp3995Q995del1cAgc-g22AY.520.001629
ORF1ab/nsp3995Q995del1cAgc-g22B.1.1600.000062
ORF1ab/nsp3995Q995del1caGca-11AY.440.000006
ORF1ab/nsp3995Q995del1cAgc-g11B.1.177.60.000977
ORF1ab/nsp3995Q995del1cAgc-g11B.1.36.10.00114
ORF1ab/nsp3995Q995del1cAgc-g11R.10.00009