CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = Q1884H

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31884Q1884HQ2702HnonsyncaGcaT845484360.9978718369-8371
ORF1ab/nsp31884Q1884HQ2702HnonsyncaGcaC8454180.002129178369-8371

Details of the mutation Q1884H within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31884Q1884HcaGcaT84368454All0.001613
ORF1ab/nsp31884Q1884HcaGcaC188454All0.000003
ORF1ab/nsp31884Q1884HcaGcaT31433143B.1.1.2140.174301
ORF1ab/nsp31884Q1884HcaGcaT18551855B.10.016991
ORF1ab/nsp31884Q1884HcaGcaT990994B.1.3890.991984
ORF1ab/nsp31884Q1884HcaGcaC4994B.1.3890.004008
ORF1ab/nsp31884Q1884HcaGcaT877880B.1.1.70.000785
ORF1ab/nsp31884Q1884HcaGcaC3880B.1.1.70.000003
ORF1ab/nsp31884Q1884HcaGcaT182182AY.40.000283
ORF1ab/nsp31884Q1884HcaGcaT151151B.1.617.20.000569
ORF1ab/nsp31884Q1884HcaGcaT106106AY.1030.000658
ORF1ab/nsp31884Q1884HcaGcaT100100B.1.1.1011
ORF1ab/nsp31884Q1884HcaGcaT8282B.1.1591
ORF1ab/nsp31884Q1884HcaGcaT6869AY.430.000301
ORF1ab/nsp31884Q1884HcaGcaC169AY.430.000004
ORF1ab/nsp31884Q1884HcaGcaT6666B.1.2820.985075
ORF1ab/nsp31884Q1884HcaGcaT5353B.1.10.000961
ORF1ab/nsp31884Q1884HcaGcaT4848AY.540.004577
ORF1ab/nsp31884Q1884HcaGcaT3838B.1.2810.826087
ORF1ab/nsp31884Q1884HcaGcaT3535AY.30.000348
ORF1ab/nsp31884Q1884HcaGcaT3232AY.1020.000848
ORF1ab/nsp31884Q1884HcaGcaT3131AY.420.001247
ORF1ab/nsp31884Q1884HcaGcaT2929B.1.2400.006251
ORF1ab/nsp31884Q1884HcaGcaT2525B.1.3690.007131
ORF1ab/nsp31884Q1884HcaGcaT2224B.1.6370.001608
ORF1ab/nsp31884Q1884HcaGcaC224B.1.6370.000146
ORF1ab/nsp31884Q1884HcaGcaT2323B.1.1600.000717
ORF1ab/nsp31884Q1884HcaGcaT1920B.1.20.000167
ORF1ab/nsp31884Q1884HcaGcaC120B.1.20.000009
ORF1ab/nsp31884Q1884HcaGcaT2020P.10.000315
ORF1ab/nsp31884Q1884HcaGcaT1919B.1.1.250.010802
ORF1ab/nsp31884Q1884HcaGcaT1919B.1.1770.00025
ORF1ab/nsp31884Q1884HcaGcaT1818AY.440.00011
ORF1ab/nsp31884Q1884HcaGcaT1616AY.250.000096
ORF1ab/nsp31884Q1884HcaGcaT1113B.1.5260.000259
ORF1ab/nsp31884Q1884HcaGcaC213B.1.5260.000047
ORF1ab/nsp31884Q1884HcaGcaT1212B.1.3110.003295
ORF1ab/nsp31884Q1884HcaGcaT1111AY.620.004793
ORF1ab/nsp31884Q1884HcaGcaT1111B0.001406
ORF1ab/nsp31884Q1884HcaGcaT1111B.1.4290.000259
ORF1ab/nsp31884Q1884HcaGcaT89B.1.5250.000905
ORF1ab/nsp31884Q1884HcaGcaC19B.1.5250.000113
ORF1ab/nsp31884Q1884HcaGcaT67AY.230.000418
ORF1ab/nsp31884Q1884HcaGcaC17AY.230.00007
ORF1ab/nsp31884Q1884HcaGcaT77AY.330.000467
ORF1ab/nsp31884Q1884HcaGcaT77AY.390.000173
ORF1ab/nsp31884Q1884HcaGcaT77B.1.1280.004447
ORF1ab/nsp31884Q1884HcaGcaT77B.1.4751
ORF1ab/nsp31884Q1884HcaGcaT66AY.1180.000376
ORF1ab/nsp31884Q1884HcaGcaT66AY.1190.000212
ORF1ab/nsp31884Q1884HcaGcaT66AY.470.000187
ORF1ab/nsp31884Q1884HcaGcaT66B.1.160.320.025751
ORF1ab/nsp31884Q1884HcaGcaT66B.1.4760.6
ORF1ab/nsp31884Q1884HcaGcaT55B.1.1.1740.016892
ORF1ab/nsp31884Q1884HcaGcaT55B.1.5960.000436
ORF1ab/nsp31884Q1884HcaGcaT44AY.1000.000184
ORF1ab/nsp31884Q1884HcaGcaT44AY.1170.000338
ORF1ab/nsp31884Q1884HcaGcaT44AY.1200.000149
ORF1ab/nsp31884Q1884HcaGcaT44AY.200.000155
ORF1ab/nsp31884Q1884HcaGcaT44AY.290.000063
ORF1ab/nsp31884Q1884HcaGcaT44AY.360.000593
ORF1ab/nsp31884Q1884HcaGcaT44AY.380.001997
ORF1ab/nsp31884Q1884HcaGcaT44AY.580.00363
ORF1ab/nsp31884Q1884HcaGcaT44AY.9.20.000147
ORF1ab/nsp31884Q1884HcaGcaT44B.1.2410.003247
ORF1ab/nsp31884Q1884HcaGcaT44B.1.36.290.002069
ORF1ab/nsp31884Q1884HcaGcaT44B.1.4360.004115
ORF1ab/nsp31884Q1884HcaGcaT33AY.1110.000549
ORF1ab/nsp31884Q1884HcaGcaT33AY.1210.000406
ORF1ab/nsp31884Q1884HcaGcaT33AY.140.000264
ORF1ab/nsp31884Q1884HcaGcaT33AY.39.10.000119
ORF1ab/nsp31884Q1884HcaGcaT33AY.640.001786
ORF1ab/nsp31884Q1884HcaGcaT33AY.970.005102
ORF1ab/nsp31884Q1884HcaGcaT33B.1.1.2200.005576
ORF1ab/nsp31884Q1884HcaGcaT33B.1.1.3060.001315
ORF1ab/nsp31884Q1884HcaGcaT33B.1.1.630.001157
ORF1ab/nsp31884Q1884HcaGcaT33B.1.130.007126
ORF1ab/nsp31884Q1884HcaGcaT33B.1.3200.003736
ORF1ab/nsp31884Q1884HcaGcaT23B.1.3510.000059
ORF1ab/nsp31884Q1884HcaGcaC13B.1.3510.00003
ORF1ab/nsp31884Q1884HcaGcaT33B.1.4110.011111
ORF1ab/nsp31884Q1884HcaGcaT33B.1.5950.000783
ORF1ab/nsp31884Q1884HcaGcaT33C.350.002322
ORF1ab/nsp31884Q1884HcaGcaT33C.40.03
ORF1ab/nsp31884Q1884HcaGcaT33R.10.00027
ORF1ab/nsp31884Q1884HcaGcaT33U.30.011583
ORF1ab/nsp31884Q1884HcaGcaT22AY.23.10.000835
ORF1ab/nsp31884Q1884HcaGcaT22AY.260.000057
ORF1ab/nsp31884Q1884HcaGcaT22AY.410.000588
ORF1ab/nsp31884Q1884HcaGcaT22AY.450.000243
ORF1ab/nsp31884Q1884HcaGcaT22AY.46.50.000397
ORF1ab/nsp31884Q1884HcaGcaT22AY.610.00021
ORF1ab/nsp31884Q1884HcaGcaT22AY.680.000547
ORF1ab/nsp31884Q1884HcaGcaT22AY.750.000112
ORF1ab/nsp31884Q1884HcaGcaT22AY.75.10.000361
ORF1ab/nsp31884Q1884HcaGcaT22AY.840.000875
ORF1ab/nsp31884Q1884HcaGcaT22AY.90.000135
ORF1ab/nsp31884Q1884HcaGcaT22AY.9.2.10.003953
ORF1ab/nsp31884Q1884HcaGcaT22AY.980.000158
ORF1ab/nsp31884Q1884HcaGcaT22B.1.1.330.000842
ORF1ab/nsp31884Q1884HcaGcaT22B.1.1.4620.017241
ORF1ab/nsp31884Q1884HcaGcaT22B.1.1.5190.000079
ORF1ab/nsp31884Q1884HcaGcaT22B.1.1050.019231
ORF1ab/nsp31884Q1884HcaGcaT22B.1.110.30.001437
ORF1ab/nsp31884Q1884HcaGcaT22B.1.177.560.001335
ORF1ab/nsp31884Q1884HcaGcaT22B.1.177.70.00033
ORF1ab/nsp31884Q1884HcaGcaT22B.1.177.820.000955
ORF1ab/nsp31884Q1884HcaGcaT22B.1.36.70.008
ORF1ab/nsp31884Q1884HcaGcaT22B.1.3620.003082
ORF1ab/nsp31884Q1884HcaGcaT22B.1.5240.002813
ORF1ab/nsp31884Q1884HcaGcaT22B.1.6230.001073
ORF1ab/nsp31884Q1884HcaGcaT22D.20.00015
ORF1ab/nsp31884Q1884HcaGcaT22P.1.140.000096
ORF1ab/nsp31884Q1884HcaGcaT22P.1.70.000639
ORF1ab/nsp31884Q1884HcaGcaT22P.20.000373
ORF1ab/nsp31884Q1884HcaGcaT22Q.80.00033
ORF1ab/nsp31884Q1884HcaGcaC11A.2.20.001689
ORF1ab/nsp31884Q1884HcaGcaT11A.2.50.000499
ORF1ab/nsp31884Q1884HcaGcaT11A.2.5.20.001572
ORF1ab/nsp31884Q1884HcaGcaT11A.270.001656
ORF1ab/nsp31884Q1884HcaGcaT11AY.1100.000113
ORF1ab/nsp31884Q1884HcaGcaT11AY.1130.000142
ORF1ab/nsp31884Q1884HcaGcaT11AY.160.00038
ORF1ab/nsp31884Q1884HcaGcaT11AY.20.000356
ORF1ab/nsp31884Q1884HcaGcaT11AY.340.000097
ORF1ab/nsp31884Q1884HcaGcaT11AY.350.000233
ORF1ab/nsp31884Q1884HcaGcaT11AY.460.000104
ORF1ab/nsp31884Q1884HcaGcaT11AY.50.000021
ORF1ab/nsp31884Q1884HcaGcaT11AY.5.20.002463
ORF1ab/nsp31884Q1884HcaGcaT11AY.590.00053
ORF1ab/nsp31884Q1884HcaGcaT11AY.660.00107
ORF1ab/nsp31884Q1884HcaGcaT11AY.830.001724
ORF1ab/nsp31884Q1884HcaGcaT11AY.880.000884
ORF1ab/nsp31884Q1884HcaGcaT11AY.900.000684
ORF1ab/nsp31884Q1884HcaGcaT11AY.960.002075
ORF1ab/nsp31884Q1884HcaGcaT11AY.990.001049
ORF1ab/nsp31884Q1884HcaGcaT11AY.99.20.000092
ORF1ab/nsp31884Q1884HcaGcaT11B.1.1.1920.002309
ORF1ab/nsp31884Q1884HcaGcaT11B.1.1.1940.00495
ORF1ab/nsp31884Q1884HcaGcaT11B.1.1.2220.000204
ORF1ab/nsp31884Q1884HcaGcaT11B.1.1.2270.004348
ORF1ab/nsp31884Q1884HcaGcaT11B.1.1.2690.001353
ORF1ab/nsp31884Q1884HcaGcaC11B.1.1.3690.000446
ORF1ab/nsp31884Q1884HcaGcaT11B.1.1.390.00051
ORF1ab/nsp31884Q1884HcaGcaT11B.1.1.4130.006897
ORF1ab/nsp31884Q1884HcaGcaT11B.1.1.4320.001266
ORF1ab/nsp31884Q1884HcaGcaT11B.1.1.470.005348
ORF1ab/nsp31884Q1884HcaGcaT11B.1.1040.00369
ORF1ab/nsp31884Q1884HcaGcaT11B.1.1260.001276
ORF1ab/nsp31884Q1884HcaGcaT11B.1.160.160.000929
ORF1ab/nsp31884Q1884HcaGcaT11B.1.160.260.002421
ORF1ab/nsp31884Q1884HcaGcaT11B.1.177.40.000211
ORF1ab/nsp31884Q1884HcaGcaT11B.1.177.600.000218
ORF1ab/nsp31884Q1884HcaGcaT11B.1.177.730.000566
ORF1ab/nsp31884Q1884HcaGcaT11B.1.220.001318
ORF1ab/nsp31884Q1884HcaGcaT11B.1.2320.000537
ORF1ab/nsp31884Q1884HcaGcaT11B.1.2430.00007
ORF1ab/nsp31884Q1884HcaGcaT11B.1.2760.016949
ORF1ab/nsp31884Q1884HcaGcaT11B.1.2930.0125
ORF1ab/nsp31884Q1884HcaGcaT11B.1.3160.111111
ORF1ab/nsp31884Q1884HcaGcaT11B.1.3290.000608
ORF1ab/nsp31884Q1884HcaGcaT11B.1.3460.001311
ORF1ab/nsp31884Q1884HcaGcaT11B.1.3500.002933
ORF1ab/nsp31884Q1884HcaGcaT11B.1.360.000146
ORF1ab/nsp31884Q1884HcaGcaT11B.1.36.160.001425
ORF1ab/nsp31884Q1884HcaGcaT11B.1.4000.000429
ORF1ab/nsp31884Q1884HcaGcaT11B.1.466.20.000391
ORF1ab/nsp31884Q1884HcaGcaT11B.1.4700.001404
ORF1ab/nsp31884Q1884HcaGcaT11B.1.4970.000315
ORF1ab/nsp31884Q1884HcaGcaT11B.1.5090.000866
ORF1ab/nsp31884Q1884HcaGcaT11B.1.5170.000427
ORF1ab/nsp31884Q1884HcaGcaT11B.1.5200.021739
ORF1ab/nsp31884Q1884HcaGcaT11B.1.5400.009709
ORF1ab/nsp31884Q1884HcaGcaT11B.1.5440.006024
ORF1ab/nsp31884Q1884HcaGcaT11B.1.5760.000907
ORF1ab/nsp31884Q1884HcaGcaT11B.1.5900.004545
ORF1ab/nsp31884Q1884HcaGcaT11B.1.5910.010638
ORF1ab/nsp31884Q1884HcaGcaT11B.1.621.10.000506
ORF1ab/nsp31884Q1884HcaGcaT11B.1.6250.002353
ORF1ab/nsp31884Q1884HcaGcaT11B.1.6280.000352
ORF1ab/nsp31884Q1884HcaGcaT11B.1.80.001972
ORF1ab/nsp31884Q1884HcaGcaT11B.1.910.002075
ORF1ab/nsp31884Q1884HcaGcaT11B.450.003831
ORF1ab/nsp31884Q1884HcaGcaT11B.600.015873
ORF1ab/nsp31884Q1884HcaGcaT11P.1.150.000232
ORF1ab/nsp31884Q1884HcaGcaT11P.1.20.001156
ORF1ab/nsp31884Q1884HcaGcaT11Q.10.000126
ORF1ab/nsp31884Q1884HcaGcaT11Q.40.000455