CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = Q1216L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31216Q1216LQ2034LnonsyncAgcTg3923910.9974496365-6367
ORF1ab/nsp31216Q1216LQ2034LnonsyncAGcTT39210.002551026365-6367

Details of the mutation Q1216L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31216Q1216LcAgcTg391392All0.000075
ORF1ab/nsp31216Q1216LcAGcTT1392All0
ORF1ab/nsp31216Q1216LcAgcTg192192B.1.1.2190.96
ORF1ab/nsp31216Q1216LcAgcTg5353AY.250.000319
ORF1ab/nsp31216Q1216LcAgcTg2929AY.40.000045
ORF1ab/nsp31216Q1216LcAgcTg2626B.1.1.70.000023
ORF1ab/nsp31216Q1216LcAgcTg1616B.1.10.00029
ORF1ab/nsp31216Q1216LcAgcTg1111B.1.617.20.000041
ORF1ab/nsp31216Q1216LcAgcTg99AY.430.00004
ORF1ab/nsp31216Q1216LcAgcTg77AY.140.000616
ORF1ab/nsp31216Q1216LcAgcTg44B.10.000037
ORF1ab/nsp31216Q1216LcAgcTg44B.1.4290.000094
ORF1ab/nsp31216Q1216LcAgcTg33AY.290.000047
ORF1ab/nsp31216Q1216LcAgcTg33AY.390.000074
ORF1ab/nsp31216Q1216LcAgcTg33B.1.1.2140.000166
ORF1ab/nsp31216Q1216LcAgcTg33B.1.1600.000094
ORF1ab/nsp31216Q1216LcAgcTg33B.1.1770.00004
ORF1ab/nsp31216Q1216LcAgcTg22AY.230.000139
ORF1ab/nsp31216Q1216LcAgcTg22AY.330.000134
ORF1ab/nsp31216Q1216LcAgcTg22AY.440.000012
ORF1ab/nsp31216Q1216LcAgcTg22B.1.5640.000852
ORF1ab/nsp31216Q1216LcAgcTg11AV.10.005051
ORF1ab/nsp31216Q1216LcAgcTg11AY.1020.000027
ORF1ab/nsp31216Q1216LcAgcTg11AY.1030.000006
ORF1ab/nsp31216Q1216LcAgcTg11AY.1190.000035
ORF1ab/nsp31216Q1216LcAgcTg11AY.300.000396
ORF1ab/nsp31216Q1216LcAgcTg11AY.34.10.00051
ORF1ab/nsp31216Q1216LcAgcTg11AY.360.000148
ORF1ab/nsp31216Q1216LcAgcTg11AY.450.000122
ORF1ab/nsp31216Q1216LcAgcTg11AY.550.000917
ORF1ab/nsp31216Q1216LcAgcTg11AY.60.000041
ORF1ab/nsp31216Q1216LcAgcTg11AY.9.20.000037
ORF1ab/nsp31216Q1216LcAGcTT11AY.940.000443
ORF1ab/nsp31216Q1216LcAgcTg11B.1.20.000009
ORF1ab/nsp31216Q1216LcAgcTg11B.1.2220.001692
ORF1ab/nsp31216Q1216LcAgcTg11B.1.3510.00003
ORF1ab/nsp31216Q1216LcAgcTg11B.1.36.360.000602
ORF1ab/nsp31216Q1216LcAgcTg11C.360.000911
ORF1ab/nsp31216Q1216LcAgcTg11P.1.140.000048