CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P74T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp374P74TP892TnonsynCcaAca1271230.9685042939-2941
ORF1ab/nsp374P74TP892TnonsynCcAAcC12720.0157482939-2941
ORF1ab/nsp374P74TP892TnonsynCcAAcT12720.0157482939-2941

Details of the mutation P74T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp374P74TCcaAca123127All0.000024
ORF1ab/nsp374P74TCcAAcT2127All0
ORF1ab/nsp374P74TCcAAcC2127All0
ORF1ab/nsp374P74TCcaAca5252AY.30.000517
ORF1ab/nsp374P74TCcaAca1414AY.1030.000087
ORF1ab/nsp374P74TCcaAca77B.1.1.70.000006
ORF1ab/nsp374P74TCcaAca77B.1.1400.132075
ORF1ab/nsp374P74TCcaAca77B.1.2430.000487
ORF1ab/nsp374P74TCcAAcC240.111111
ORF1ab/nsp374P74TCcAAcT240.111111
ORF1ab/nsp374P74TCcaAca44AY.290.000063
ORF1ab/nsp374P74TCcaAca44AY.40.000006
ORF1ab/nsp374P74TCcaAca44B.1.10.000073
ORF1ab/nsp374P74TCcaAca33B.1.1.630.001157
ORF1ab/nsp374P74TCcaAca22AY.230.000139
ORF1ab/nsp374P74TCcaAca22B.10.000018
ORF1ab/nsp374P74TCcaAca22B.1.1.5190.000079
ORF1ab/nsp374P74TCcaAca22B.1.20.000018
ORF1ab/nsp374P74TCcaAca11A.2.50.000499
ORF1ab/nsp374P74TCcaAca11AY.1000.000046
ORF1ab/nsp374P74TCcaAca11AY.430.000004
ORF1ab/nsp374P74TCcaAca11AY.590.00053
ORF1ab/nsp374P74TCcaAca11AY.610.000105
ORF1ab/nsp374P74TCcaAca11AY.770.001127
ORF1ab/nsp374P74TCcaAca11AY.90.000068
ORF1ab/nsp374P74TCcaAca11AY.920.000287
ORF1ab/nsp374P74TCcaAca11B.1.1.2730.006757
ORF1ab/nsp374P74TCcaAca11B.1.110.30.000718
ORF1ab/nsp374P74TCcaAca11B.1.466.20.000391
ORF1ab/nsp374P74TCcaAca11B.1.617.20.000004
ORF1ab/nsp374P74TCcaAca11B.6.60.000889