CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P74S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp374P74SP892SnonsynCcaTca4569456912939-2941

Details of the mutation P74S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp374P74SCcaTca45694569All0.000874
ORF1ab/nsp374P74SCcaTca861861AY.1050.553698
ORF1ab/nsp374P74SCcaTca812812AY.40.001264
ORF1ab/nsp374P74SCcaTca469469B.1.1.70.00042
ORF1ab/nsp374P74SCcaTca209209B.1.1990.863636
ORF1ab/nsp374P74SCcaTca200200AY.1030.001242
ORF1ab/nsp374P74SCcaTca188188AY.430.000833
ORF1ab/nsp374P74SCcaTca162162B.1.617.20.00061
ORF1ab/nsp374P74SCcaTca159159B.1.20.0014
ORF1ab/nsp374P74SCcaTca120120AY.250.000722
ORF1ab/nsp374P74SCcaTca111111B.10.001017
ORF1ab/nsp374P74SCcaTca8484P.10.001323
ORF1ab/nsp374P74SCcaTca6565B.1.1600.002027
ORF1ab/nsp374P74SCcaTca5858B.1.5750.017597
ORF1ab/nsp374P74SCcaTca5050AY.290.000789
ORF1ab/nsp374P74SCcaTca4444AY.440.000268
ORF1ab/nsp374P74SCcaTca4343B.1.177.40.009076
ORF1ab/nsp374P74SCcaTca3636B.1.4290.000847
ORF1ab/nsp374P74SCcaTca3535B.1.5260.000823
ORF1ab/nsp374P74SCcaTca3333B.1.10.000599
ORF1ab/nsp374P74SCcaTca3333B.1.1770.000435
ORF1ab/nsp374P74SCcaTca3232AY.30.000318
ORF1ab/nsp374P74SCcaTca2828B.1.2400.006036
ORF1ab/nsp374P74SCcaTca2727B.1.3510.000803
ORF1ab/nsp374P74SCcaTca2323B.1.2580.001531
ORF1ab/nsp374P74SCcaTca2222B.1.1.2770.016692
ORF1ab/nsp374P74SCcaTca2121B.1.3091
ORF1ab/nsp374P74SCcaTca1919B.1.36.380.031199
ORF1ab/nsp374P74SCcaTca1818AY.260.00051
ORF1ab/nsp374P74SCcaTca1818B.1.1.1890.027231
ORF1ab/nsp374P74SCcaTca1717B.1.1.5190.000675
ORF1ab/nsp374P74SCcaTca1616AY.640.009524
ORF1ab/nsp374P74SCcaTca1515AY.3.10.001279
ORF1ab/nsp374P74SCcaTca1515AY.740.001735
ORF1ab/nsp374P74SCcaTca1515B.1.177.730.008494
ORF1ab/nsp374P74SCcaTca1414AY.150.031111
ORF1ab/nsp374P74SCcaTca1414AY.4.20.000304
ORF1ab/nsp374P74SCcaTca1414B.1.1.390.007136
ORF1ab/nsp374P74SCcaTca1212AY.420.000483
ORF1ab/nsp374P74SCcaTca1212AY.50.000248
ORF1ab/nsp374P74SCcaTca1111AY.200.000428
ORF1ab/nsp374P74SCcaTca1111B.1.5250.001245
ORF1ab/nsp374P74SCcaTca1010AY.9.20.000367
ORF1ab/nsp374P74SCcaTca1010P.1.150.002323
ORF1ab/nsp374P74SCcaTca99AY.1170.000761
ORF1ab/nsp374P74SCcaTca99B.1.3200.011208
ORF1ab/nsp374P74SCcaTca88AY.9.10.00067
ORF1ab/nsp374P74SCcaTca88P.1.160.002993
ORF1ab/nsp374P74SCcaTca77B.1.1.4640.010309
ORF1ab/nsp374P74SCcaTca77B.1.36.290.003621
ORF1ab/nsp374P74SCcaTca77B.1.6370.000512
ORF1ab/nsp374P74SCcaTca66AY.470.000187
ORF1ab/nsp374P74SCcaTca66AY.980.000474
ORF1ab/nsp374P74SCcaTca66B.1.1.250.003411
ORF1ab/nsp374P74SCcaTca66B.1.177.120.00091
ORF1ab/nsp374P74SCcaTca66B.1.177.580.007989
ORF1ab/nsp374P74SCcaTca66B.1.2210.000426
ORF1ab/nsp374P74SCcaTca66B.1.466.20.002347
ORF1ab/nsp374P74SCcaTca55AY.39.10.000198
ORF1ab/nsp374P74SCcaTca55AY.540.000477
ORF1ab/nsp374P74SCcaTca55AY.90.000338
ORF1ab/nsp374P74SCcaTca55B.1.1.1920.011547
ORF1ab/nsp374P74SCcaTca55B.1.360.00073
ORF1ab/nsp374P74SCcaTca55B.1.5960.000436
ORF1ab/nsp374P74SCcaTca55N.40.021277
ORF1ab/nsp374P74SCcaTca44AY.1000.000184
ORF1ab/nsp374P74SCcaTca44AY.1160.001147
ORF1ab/nsp374P74SCcaTca44B.1.1.3010.004717
ORF1ab/nsp374P74SCcaTca44B.1.1.370.000771
ORF1ab/nsp374P74SCcaTca44B.1.36.340.085106
ORF1ab/nsp374P74SCcaTca44B.1.4010.032787
ORF1ab/nsp374P74SCcaTca44B.1.438.10.000429
ORF1ab/nsp374P74SCcaTca44B.1.4890.173913
ORF1ab/nsp374P74SCcaTca44B.1.5580.018265
ORF1ab/nsp374P74SCcaTca44C.360.003643
ORF1ab/nsp374P74SCcaTca44P.1.140.000191
ORF1ab/nsp374P74SCcaTca44P.1.60.007782
ORF1ab/nsp374P74SCcaTca33AY.1180.000188
ORF1ab/nsp374P74SCcaTca33AY.1190.000106
ORF1ab/nsp374P74SCcaTca33AY.230.000209
ORF1ab/nsp374P74SCcaTca33AY.270.000194
ORF1ab/nsp374P74SCcaTca33AY.400.002893
ORF1ab/nsp374P74SCcaTca33AY.450.000365
ORF1ab/nsp374P74SCcaTca33AY.46.40.000494
ORF1ab/nsp374P74SCcaTca33AY.46.60.000217
ORF1ab/nsp374P74SCcaTca33AY.480.001395
ORF1ab/nsp374P74SCcaTca33AY.690.00056
ORF1ab/nsp374P74SCcaTca33AY.75.10.000541
ORF1ab/nsp374P74SCcaTca33AY.880.002653
ORF1ab/nsp374P74SCcaTca33AY.99.10.004658
ORF1ab/nsp374P74SCcaTca33B.1.1.2530.007519
ORF1ab/nsp374P74SCcaTca33B.1.1390.002199
ORF1ab/nsp374P74SCcaTca33B.1.2430.000209
ORF1ab/nsp374P74SCcaTca33B.1.258.170.000312
ORF1ab/nsp374P74SCcaTca33B.1.3620.004622
ORF1ab/nsp374P74SCcaTca33B.1.3690.000856
ORF1ab/nsp374P74SCcaTca33B.1.4090.002344
ORF1ab/nsp374P74SCcaTca33C.160.003181
ORF1ab/nsp374P74SCcaTca33D.20.000225
ORF1ab/nsp374P74SCcaTca33Q.10.000379
ORF1ab/nsp374P74SCcaTca22A.20.001324
ORF1ab/nsp374P74SCcaTca22A.23.10.001408
ORF1ab/nsp374P74SCcaTca22AY.1040.003968
ORF1ab/nsp374P74SCcaTca22AY.1200.000074
ORF1ab/nsp374P74SCcaTca22AY.130.000322
ORF1ab/nsp374P74SCcaTca22AY.29.10.000441
ORF1ab/nsp374P74SCcaTca22AY.340.000194
ORF1ab/nsp374P74SCcaTca22AY.46.10.002053
ORF1ab/nsp374P74SCcaTca22AY.550.001835
ORF1ab/nsp374P74SCcaTca22AY.680.000547
ORF1ab/nsp374P74SCcaTca22AY.98.10.000097
ORF1ab/nsp374P74SCcaTca22AY.99.20.000184
ORF1ab/nsp374P74SCcaTca22B.1.1.1210.004854
ORF1ab/nsp374P74SCcaTca22B.1.1.1760.000879
ORF1ab/nsp374P74SCcaTca22B.1.1.2090.017857
ORF1ab/nsp374P74SCcaTca22B.1.1.2200.003717
ORF1ab/nsp374P74SCcaTca22B.1.1.2390.064516
ORF1ab/nsp374P74SCcaTca22B.1.1.2630.003115
ORF1ab/nsp374P74SCcaTca22B.1.1.280.000622
ORF1ab/nsp374P74SCcaTca22B.1.1.330.000842
ORF1ab/nsp374P74SCcaTca22B.1.1.3720.001377
ORF1ab/nsp374P74SCcaTca22B.1.177.210.000153
ORF1ab/nsp374P74SCcaTca22B.1.2320.001075
ORF1ab/nsp374P74SCcaTca22B.1.2340.000264
ORF1ab/nsp374P74SCcaTca22B.1.4270.000101
ORF1ab/nsp374P74SCcaTca22B.1.5090.001732
ORF1ab/nsp374P74SCcaTca22B.1.5490.014388
ORF1ab/nsp374P74SCcaTca22B.1.6090.000959
ORF1ab/nsp374P74SCcaTca22B.1.88.10.009615
ORF1ab/nsp374P74SCcaTca22B.390.004662
ORF1ab/nsp374P74SCcaTca22C.370.000232
ORF1ab/nsp374P74SCcaTca22R.10.00018
ORF1ab/nsp374P74SCcaTca11A0.000387
ORF1ab/nsp374P74SCcaTca11A.2.20.001689
ORF1ab/nsp374P74SCcaTca11AY.1020.000027
ORF1ab/nsp374P74SCcaTca11AY.1130.000142
ORF1ab/nsp374P74SCcaTca11AY.160.00038
ORF1ab/nsp374P74SCcaTca11AY.190.00114
ORF1ab/nsp374P74SCcaTca11AY.20.000356
ORF1ab/nsp374P74SCcaTca11AY.240.000431
ORF1ab/nsp374P74SCcaTca11AY.300.000396
ORF1ab/nsp374P74SCcaTca11AY.320.000532
ORF1ab/nsp374P74SCcaTca11AY.350.000233
ORF1ab/nsp374P74SCcaTca11AY.390.000025
ORF1ab/nsp374P74SCcaTca11AY.4.2.10.000149
ORF1ab/nsp374P74SCcaTca11AY.4.40.000409
ORF1ab/nsp374P74SCcaTca11AY.460.000104
ORF1ab/nsp374P74SCcaTca11AY.5.30.000337
ORF1ab/nsp374P74SCcaTca11AY.520.000814
ORF1ab/nsp374P74SCcaTca11AY.530.000288
ORF1ab/nsp374P74SCcaTca11AY.60.000041
ORF1ab/nsp374P74SCcaTca11AY.650.000533
ORF1ab/nsp374P74SCcaTca11AY.7.10.000113
ORF1ab/nsp374P74SCcaTca11AY.710.000475
ORF1ab/nsp374P74SCcaTca11AY.80.000606
ORF1ab/nsp374P74SCcaTca11AY.810.001992
ORF1ab/nsp374P74SCcaTca11AY.900.000684
ORF1ab/nsp374P74SCcaTca11AY.920.000287
ORF1ab/nsp374P74SCcaTca11AY.930.000273
ORF1ab/nsp374P74SCcaTca11B0.000128
ORF1ab/nsp374P74SCcaTca11B.1.1.1610.003534
ORF1ab/nsp374P74SCcaTca11B.1.1.1700.001247
ORF1ab/nsp374P74SCcaTca11B.1.1.1980.001468
ORF1ab/nsp374P74SCcaTca11B.1.1.2140.000055
ORF1ab/nsp374P74SCcaTca11B.1.1.2430.004082
ORF1ab/nsp374P74SCcaTca11B.1.1.2650.003155
ORF1ab/nsp374P74SCcaTca11B.1.1.270.00565
ORF1ab/nsp374P74SCcaTca11B.1.1.2750.011236
ORF1ab/nsp374P74SCcaTca11B.1.1.2910.000742
ORF1ab/nsp374P74SCcaTca11B.1.1.3070.002532
ORF1ab/nsp374P74SCcaTca11B.1.1.3180.000302
ORF1ab/nsp374P74SCcaTca11B.1.1.3480.000796
ORF1ab/nsp374P74SCcaTca11B.1.1.3690.000446
ORF1ab/nsp374P74SCcaTca11B.1.1.4120.007634
ORF1ab/nsp374P74SCcaTca11B.1.1.4480.002033
ORF1ab/nsp374P74SCcaTca11B.1.1.500.000679
ORF1ab/nsp374P74SCcaTca11B.1.1.700.000341
ORF1ab/nsp374P74SCcaTca11B.1.1.80.003584
ORF1ab/nsp374P74SCcaTca11B.1.110.30.000718
ORF1ab/nsp374P74SCcaTca11B.1.160.260.002421
ORF1ab/nsp374P74SCcaTca11B.1.160.310.008065
ORF1ab/nsp374P74SCcaTca11B.1.177.170.000821
ORF1ab/nsp374P74SCcaTca11B.1.177.180.00116
ORF1ab/nsp374P74SCcaTca11B.1.177.200.001517
ORF1ab/nsp374P74SCcaTca11B.1.177.230.003236
ORF1ab/nsp374P74SCcaTca11B.1.177.390.015385
ORF1ab/nsp374P74SCcaTca11B.1.177.530.002392
ORF1ab/nsp374P74SCcaTca11B.1.177.620.001192
ORF1ab/nsp374P74SCcaTca11B.1.177.70.000165
ORF1ab/nsp374P74SCcaTca11B.1.2180.005155
ORF1ab/nsp374P74SCcaTca11B.1.2220.001692
ORF1ab/nsp374P74SCcaTca11B.1.2470.014925
ORF1ab/nsp374P74SCcaTca11B.1.2890.00266
ORF1ab/nsp374P74SCcaTca11B.1.2980.002114
ORF1ab/nsp374P74SCcaTca11B.1.3110.000275
ORF1ab/nsp374P74SCcaTca11B.1.3280.03125
ORF1ab/nsp374P74SCcaTca11B.1.351.30.000876
ORF1ab/nsp374P74SCcaTca11B.1.36.190.009259
ORF1ab/nsp374P74SCcaTca11B.1.36.330.007576
ORF1ab/nsp374P74SCcaTca11B.1.3610.001289
ORF1ab/nsp374P74SCcaTca11B.1.3990.001934
ORF1ab/nsp374P74SCcaTca11B.1.4040.001302
ORF1ab/nsp374P74SCcaTca11B.1.4590.004082
ORF1ab/nsp374P74SCcaTca11B.1.4800.002488
ORF1ab/nsp374P74SCcaTca11B.1.5640.000426
ORF1ab/nsp374P74SCcaTca11B.1.5760.000907
ORF1ab/nsp374P74SCcaTca11B.1.5770.000687
ORF1ab/nsp374P74SCcaTca11B.1.5820.000491
ORF1ab/nsp374P74SCcaTca11B.1.617.10.000129
ORF1ab/nsp374P74SCcaTca11B.1.617.30.002985
ORF1ab/nsp374P74SCcaTca11B.1.6210.000089
ORF1ab/nsp374P74SCcaTca11B.1.6280.000352
ORF1ab/nsp374P74SCcaTca11B.40.002208
ORF1ab/nsp374P74SCcaTca11B.400.000364
ORF1ab/nsp374P74SCcaTca11B.550.00295
ORF1ab/nsp374P74SCcaTca11C.36.30.000567
ORF1ab/nsp374P74SCcaTca11C.80.004464
ORF1ab/nsp374P74SCcaTca11N.30.005814
ORF1ab/nsp374P74SCcaTca11N.50.001767
ORF1ab/nsp374P74SCcaTca11P.20.000187
ORF1ab/nsp374P74SCcaTca11Q.30.000145
ORF1ab/nsp374P74SCcaTca11Q.40.000455