CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P402del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3402P402delP1220deldelCCT---10910913923-3925

Details of the mutation P402del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3402P402delCCT---109109All0.000021
ORF1ab/nsp3402P402delCCT---1616B.10.000147
ORF1ab/nsp3402P402delCCT---99AY.40.000014
ORF1ab/nsp3402P402delCCT---77B.1.1.70.000006
ORF1ab/nsp3402P402delCCT---66AY.30.00006
ORF1ab/nsp3402P402delCCT---55B.1.5960.000436
ORF1ab/nsp3402P402delCCT---44B.1.20.000035
ORF1ab/nsp3402P402delCCT---33AY.230.000209
ORF1ab/nsp3402P402delCCT---33B.1.617.20.000011
ORF1ab/nsp3402P402delCCT---22AY.260.000057
ORF1ab/nsp3402P402delCCT---22AY.390.000049
ORF1ab/nsp3402P402delCCT---22B.1.10.000036
ORF1ab/nsp3402P402delCCT---22B.1.1.2000.014925
ORF1ab/nsp3402P402delCCT---22B.1.2230.005556
ORF1ab/nsp3402P402delCCT---22B.1.5260.000047
ORF1ab/nsp3402P402delCCT---22B.1.6210.000177
ORF1ab/nsp3402P402delCCT---22P.10.000032
ORF1ab/nsp3402P402delCCT---22P.1.120.000968
ORF1ab/nsp3402P402delCCT---22R.10.00018
ORF1ab/nsp3402P402delCCT---11AY.1210.000135
ORF1ab/nsp3402P402delCCT---11AY.190.00114
ORF1ab/nsp3402P402delCCT---11AY.200.000039
ORF1ab/nsp3402P402delCCT---11AY.250.000006
ORF1ab/nsp3402P402delCCT---11AY.290.000016
ORF1ab/nsp3402P402delCCT---11AY.3.10.000085
ORF1ab/nsp3402P402delCCT---11AY.46.20.000635
ORF1ab/nsp3402P402delCCT---11AY.50.000021
ORF1ab/nsp3402P402delCCT---11AY.680.000274
ORF1ab/nsp3402P402delCCT---11AY.98.10.000048
ORF1ab/nsp3402P402delCCT---11B.1.1.1920.002309
ORF1ab/nsp3402P402delCCT---11B.1.1.2210.010101
ORF1ab/nsp3402P402delCCT---11B.1.1.3010.001179
ORF1ab/nsp3402P402delCCT---11B.1.1.3160.000925
ORF1ab/nsp3402P402delCCT---11B.1.1.3200.018182
ORF1ab/nsp3402P402delCCT---11B.1.1.330.000421
ORF1ab/nsp3402P402delCCT---11B.1.1.3370.003597
ORF1ab/nsp3402P402delCCT---11B.1.1.4160.000905
ORF1ab/nsp3402P402delCCT---11B.1.1.5190.00004
ORF1ab/nsp3402P402delCCT---11B.1.1770.000013
ORF1ab/nsp3402P402delCCT---11B.1.177.40.000211
ORF1ab/nsp3402P402delCCT---11B.1.177.570.000281
ORF1ab/nsp3402P402delCCT---11B.1.2210.000071
ORF1ab/nsp3402P402delCCT---11B.1.360.000146
ORF1ab/nsp3402P402delCCT---11B.1.36.160.001425
ORF1ab/nsp3402P402delCCT---11B.1.36.180.00042
ORF1ab/nsp3402P402delCCT---11B.1.4200.010417
ORF1ab/nsp3402P402delCCT---11B.1.4270.00005
ORF1ab/nsp3402P402delCCT---11B.1.4290.000024
ORF1ab/nsp3402P402delCCT---11B.1.5950.000261
ORF1ab/nsp3402P402delCCT---11B.340.013699
ORF1ab/nsp3402P402delCCT---11B.570.015152
ORF1ab/nsp3402P402delCCT---11C.370.000116
ORF1ab/nsp3402P402delCCT---11D.20.000075
ORF1ab/nsp3402P402delCCT---11N.60.007092
ORF1ab/nsp3402P402delCCT---11P.1.140.000048