CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P395L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3395P395LP1213LnonsyncCacTa424141500.9785433902-3904
ORF1ab/nsp3395P395LP1213LnonsynCCaTTa4241890.02098563902-3904
ORF1ab/nsp3395P395LP1213LnonsyncCAcTG424110.0002357933902-3904
ORF1ab/nsp3395P395LP1213LnonsynCCATTG424110.0002357933902-3904

Details of the mutation P395L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3395P395LcCacTa41504241All0.000794
ORF1ab/nsp3395P395LCCaTTa894241All0.000017
ORF1ab/nsp3395P395LCCATTG14241All0
ORF1ab/nsp3395P395LcCAcTG14241All0
ORF1ab/nsp3395P395LcCacTa755773B.1.1.70.000676
ORF1ab/nsp3395P395LCCaTTa18773B.1.1.70.000016
ORF1ab/nsp3395P395LcCacTa288288B.1.20.002536
ORF1ab/nsp3395P395LcCacTa286286AY.250.00172
ORF1ab/nsp3395P395LcCacTa275275B.1.617.20.001035
ORF1ab/nsp3395P395LcCacTa252252AY.40.000392
ORF1ab/nsp3395P395LcCacTa244244P.10.003844
ORF1ab/nsp3395P395LcCacTa173173B.1.1770.002278
ORF1ab/nsp3395P395LcCacTa141141AY.430.000625
ORF1ab/nsp3395P395LcCacTa136136B.1.4290.0032
ORF1ab/nsp3395P395LcCacTa73125B.1.3510.00217
ORF1ab/nsp3395P395LCCaTTa52125B.1.3510.001546
ORF1ab/nsp3395P395LcCacTa101101B.1.4270.0051
ORF1ab/nsp3395P395LcCacTa8484B.1.10.001524
ORF1ab/nsp3395P395LcCacTa7070AY.30.000696
ORF1ab/nsp3395P395LcCacTa6767AY.440.000408
ORF1ab/nsp3395P395LcCacTa5656AY.1030.000348
ORF1ab/nsp3395P395LcCacTa5455B.10.000495
ORF1ab/nsp3395P395LCCaTTa155B.10.000009
ORF1ab/nsp3395P395LcCacTa5454AY.4.20.001171
ORF1ab/nsp3395P395LcCacTa4242B.1.2430.002923
ORF1ab/nsp3395P395LcCacTa3636B.1.1600.001123
ORF1ab/nsp3395P395LcCacTa3434AY.46.40.005593
ORF1ab/nsp3395P395LcCacTa3434B.1.3110.009336
ORF1ab/nsp3395P395LcCacTa3030AY.1020.000795
ORF1ab/nsp3395P395LcCacTa2929B.1.4970.009128
ORF1ab/nsp3395P395LcCacTa2929P.1.140.001386
ORF1ab/nsp3395P395LcCacTa1527B.1.466.20.005869
ORF1ab/nsp3395P395LCCaTTa1227B.1.466.20.004695
ORF1ab/nsp3395P395LcCacTa2626P.1.150.006041
ORF1ab/nsp3395P395LcCacTa2424AY.1180.001504
ORF1ab/nsp3395P395LcCacTa2424AY.1200.000892
ORF1ab/nsp3395P395LcCacTa2121AY.470.000653
ORF1ab/nsp3395P395LcCacTa2121B.1.177.120.003186
ORF1ab/nsp3395P395LcCacTa2020AY.260.000566
ORF1ab/nsp3395P395LcCacTa1919B.1.6340.065068
ORF1ab/nsp3395P395LcCacTa1818AY.1000.000828
ORF1ab/nsp3395P395LcCacTa1818AY.1130.002563
ORF1ab/nsp3395P395LcCacTa1818AY.390.000445
ORF1ab/nsp3395P395LcCacTa1717B.1.1.5190.000675
ORF1ab/nsp3395P395LcCacTa1717P.1.160.00636
ORF1ab/nsp3395P395LcCacTa1616AY.750.000896
ORF1ab/nsp3395P395LcCacTa1414AY.290.000221
ORF1ab/nsp3395P395LcCacTa1414P.20.002613
ORF1ab/nsp3395P395LcCacTa1313AY.50.000268
ORF1ab/nsp3395P395LcCacTa1212AY.980.000948
ORF1ab/nsp3395P395LcCacTa1212B.390.027972
ORF1ab/nsp3395P395LcCacTa910AY.230.000628
ORF1ab/nsp3395P395LCCaTTa110AY.230.00007
ORF1ab/nsp3395P395LcCacTa1010AY.60.000411
ORF1ab/nsp3395P395LcCacTa1010B.1.1.3060.004384
ORF1ab/nsp3395P395LcCacTa1010B.1.1.330.004209
ORF1ab/nsp3395P395LcCacTa1010B.1.2580.000665
ORF1ab/nsp3395P395LcCacTa99AY.1190.000318
ORF1ab/nsp3395P395LcCacTa99AY.200.00035
ORF1ab/nsp3395P395LcCacTa99AY.350.002097
ORF1ab/nsp3395P395LcCacTa99B.1.6210.000797
ORF1ab/nsp3395P395LcCacTa88AY.690.001493
ORF1ab/nsp3395P395LcCacTa88B.1.1.2410.016563
ORF1ab/nsp3395P395LcCacTa88B.1.1.3170.003294
ORF1ab/nsp3395P395LcCacTa88B.1.1.3180.002414
ORF1ab/nsp3395P395LcCacTa88B.1.177.210.000612
ORF1ab/nsp3395P395LcCacTa88B.1.360.001167
ORF1ab/nsp3395P395LcCacTa77AY.116.10.00218
ORF1ab/nsp3395P395LcCacTa67AY.450.00073
ORF1ab/nsp3395P395LCCaTTa17AY.450.000122
ORF1ab/nsp3395P395LcCacTa77AY.610.000733
ORF1ab/nsp3395P395LcCacTa77B.1.1.4340.00244
ORF1ab/nsp3395P395LcCacTa77B.1.5260.000165
ORF1ab/nsp3395P395LcCacTa77C.36.30.003971
ORF1ab/nsp3395P395LcCacTa77P.1.10.002224
ORF1ab/nsp3395P395LcCacTa66AY.9.20.00022
ORF1ab/nsp3395P395LcCacTa66B.1.5960.000523
ORF1ab/nsp3395P395LcCacTa55A.300.714286
ORF1ab/nsp3395P395LcCacTa55AY.130.000805
ORF1ab/nsp3395P395LcCacTa55AY.16.10.00235
ORF1ab/nsp3395P395LcCacTa55B.1.177.170.004105
ORF1ab/nsp3395P395LcCacTa55B.1.2210.000355
ORF1ab/nsp3395P395LcCacTa55R.10.00045
ORF1ab/nsp3395P395LcCAcTG140.055556
ORF1ab/nsp3395P395LCCaTTa140.055556
ORF1ab/nsp3395P395LcCacTa140.055556
ORF1ab/nsp3395P395LCCATTG140.055556
ORF1ab/nsp3395P395LcCacTa44AY.1210.000541
ORF1ab/nsp3395P395LcCacTa44AY.360.000593
ORF1ab/nsp3395P395LcCacTa44AY.790.004843
ORF1ab/nsp3395P395LcCacTa44B.1.1.2220.000816
ORF1ab/nsp3395P395LcCacTa44B.1.1.250.002274
ORF1ab/nsp3395P395LcCacTa44B.1.1.4120.030534
ORF1ab/nsp3395P395LcCacTa44B.1.177.870.002911
ORF1ab/nsp3395P395LcCacTa44B.1.4040.005208
ORF1ab/nsp3395P395LcCacTa44C.370.000464
ORF1ab/nsp3395P395LcCacTa44Q.80.00066
ORF1ab/nsp3395P395LcCacTa33AY.1170.000254
ORF1ab/nsp3395P395LcCacTa33AY.340.000291
ORF1ab/nsp3395P395LcCacTa33AY.420.000121
ORF1ab/nsp3395P395LcCacTa33AY.460.000312
ORF1ab/nsp3395P395LcCacTa23AY.590.001059
ORF1ab/nsp3395P395LCCaTTa13AY.590.00053
ORF1ab/nsp3395P395LcCacTa33AY.99.20.000276
ORF1ab/nsp3395P395LcCacTa33B.1.1.1760.001318
ORF1ab/nsp3395P395LcCacTa33B.1.1.2140.000166
ORF1ab/nsp3395P395LcCacTa33B.1.1.3260.005282
ORF1ab/nsp3395P395LcCacTa33B.1.1.700.001023
ORF1ab/nsp3395P395LcCacTa33B.1.177.860.00055
ORF1ab/nsp3395P395LcCacTa33B.1.3980.008929
ORF1ab/nsp3395P395LcCacTa33B.1.5250.000339
ORF1ab/nsp3395P395LcCacTa33B.1.6370.000219
ORF1ab/nsp3395P395LcCacTa33B.1.6380.157895
ORF1ab/nsp3395P395LcCacTa33B.40.006623
ORF1ab/nsp3395P395LcCacTa33C.37.10.007853
ORF1ab/nsp3395P395LcCacTa33Q.70.003333
ORF1ab/nsp3395P395LcCacTa22A.23.10.001408
ORF1ab/nsp3395P395LcCacTa22AY.1140.000462
ORF1ab/nsp3395P395LcCacTa22AY.140.000176
ORF1ab/nsp3395P395LcCacTa22AY.160.000759
ORF1ab/nsp3395P395LcCacTa22AY.240.000862
ORF1ab/nsp3395P395LcCacTa22AY.270.000129
ORF1ab/nsp3395P395LcCacTa22AY.4.2.10.000298
ORF1ab/nsp3395P395LcCacTa22AY.4.50.000215
ORF1ab/nsp3395P395LcCacTa22AY.570.001312
ORF1ab/nsp3395P395LcCacTa22AY.840.000875
ORF1ab/nsp3395P395LcCacTa22AY.90.000135
ORF1ab/nsp3395P395LcCacTa22AY.9.10.000167
ORF1ab/nsp3395P395LcCacTa22AY.990.002099
ORF1ab/nsp3395P395LcCacTa22B.1.1.2160.001781
ORF1ab/nsp3395P395LcCacTa22B.1.1.2840.000215
ORF1ab/nsp3395P395LcCacTa22B.1.1.3480.001592
ORF1ab/nsp3395P395LcCacTa22B.1.1.370.000386
ORF1ab/nsp3395P395LcCacTa22B.1.1.440.004819
ORF1ab/nsp3395P395LcCacTa22B.1.110.30.001437
ORF1ab/nsp3395P395LcCacTa22B.1.177.810.000379
ORF1ab/nsp3395P395LcCacTa22B.1.1890.008584
ORF1ab/nsp3395P395LcCacTa22B.1.220.002635
ORF1ab/nsp3395P395LcCacTa22B.1.2340.000264
ORF1ab/nsp3395P395LcCacTa22B.1.3440.016393
ORF1ab/nsp3395P395LcCacTa22B.1.4200.020833
ORF1ab/nsp3395P395LcCacTa22B.1.438.10.000215
ORF1ab/nsp3395P395LcCacTa22B.1.4700.002809
ORF1ab/nsp3395P395LcCacTa22B.1.5610.000794
ORF1ab/nsp3395P395LcCacTa22B.1.6030.021277
ORF1ab/nsp3395P395LcCacTa22B.1.617.10.000258
ORF1ab/nsp3395P395LcCacTa22B.1.9.40.01227
ORF1ab/nsp3395P395LcCacTa22D.20.00015
ORF1ab/nsp3395P395LcCacTa22P.1.40.001953
ORF1ab/nsp3395P395LcCacTa22P.1.90.009615
ORF1ab/nsp3395P395LcCacTa22Q.10.000253
ORF1ab/nsp3395P395LcCacTa11A0.000387
ORF1ab/nsp3395P395LcCacTa11A.20.000662
ORF1ab/nsp3395P395LcCacTa11A.2.40.003367
ORF1ab/nsp3395P395LcCacTa11A.2.50.000499
ORF1ab/nsp3395P395LcCacTa11A.2.5.20.001572
ORF1ab/nsp3395P395LcCacTa11A.2.5.30.010309
ORF1ab/nsp3395P395LcCacTa11AD.20.000219
ORF1ab/nsp3395P395LcCacTa11AE.80.000489
ORF1ab/nsp3395P395LcCacTa11AU.20.002421
ORF1ab/nsp3395P395LcCacTa11AY.1060.000335
ORF1ab/nsp3395P395LcCacTa11AY.1080.001103
ORF1ab/nsp3395P395LcCacTa11AY.1110.000183
ORF1ab/nsp3395P395LCCaTTa11AY.1150.005208
ORF1ab/nsp3395P395LcCacTa11AY.300.000396
ORF1ab/nsp3395P395LcCacTa11AY.330.000067
ORF1ab/nsp3395P395LcCacTa11AY.370.000316
ORF1ab/nsp3395P395LcCacTa11AY.380.000499
ORF1ab/nsp3395P395LcCacTa11AY.46.20.000635
ORF1ab/nsp3395P395LcCacTa11AY.46.60.000072
ORF1ab/nsp3395P395LcCacTa11AY.5.30.000337
ORF1ab/nsp3395P395LcCacTa11AY.530.000288
ORF1ab/nsp3395P395LcCacTa11AY.540.000095
ORF1ab/nsp3395P395LcCacTa11AY.650.000533
ORF1ab/nsp3395P395LcCacTa11AY.710.000475
ORF1ab/nsp3395P395LcCacTa11AY.740.000116
ORF1ab/nsp3395P395LcCacTa11AY.75.10.00018
ORF1ab/nsp3395P395LcCacTa11AY.80.000606
ORF1ab/nsp3395P395LcCacTa11AY.830.001724
ORF1ab/nsp3395P395LcCacTa11AY.860.00083
ORF1ab/nsp3395P395LcCacTa11AY.890.004902
ORF1ab/nsp3395P395LcCacTa11AY.920.000287
ORF1ab/nsp3395P395LcCacTa11AY.950.000761
ORF1ab/nsp3395P395LcCacTa11AY.98.10.000048
ORF1ab/nsp3395P395LcCacTa11B.1.1.10.000327
ORF1ab/nsp3395P395LcCacTa11B.1.1.1350.004695
ORF1ab/nsp3395P395LcCacTa11B.1.1.1530.001095
ORF1ab/nsp3395P395LcCacTa11B.1.1.2010.02439
ORF1ab/nsp3395P395LCCaTTa11B.1.1.2580.003257
ORF1ab/nsp3395P395LcCacTa11B.1.1.280.000311
ORF1ab/nsp3395P395LcCacTa11B.1.1.4190.007407
ORF1ab/nsp3395P395LcCacTa11B.1.1.4330.001425
ORF1ab/nsp3395P395LcCacTa11B.1.1.5260.003546
ORF1ab/nsp3395P395LcCacTa11B.1.1.540.003021
ORF1ab/nsp3395P395LcCacTa11B.1.1390.000733
ORF1ab/nsp3395P395LcCacTa11B.1.1630.02439
ORF1ab/nsp3395P395LcCacTa11B.1.177.100.000878
ORF1ab/nsp3395P395LcCacTa11B.1.177.330.001645
ORF1ab/nsp3395P395LcCacTa11B.1.177.350.000691
ORF1ab/nsp3395P395LcCacTa11B.1.177.420.000894
ORF1ab/nsp3395P395LcCacTa11B.1.177.600.000218
ORF1ab/nsp3395P395LcCacTa11B.1.177.730.000566
ORF1ab/nsp3395P395LcCacTa11B.1.177.820.000477
ORF1ab/nsp3395P395LcCacTa11B.1.177.830.001481
ORF1ab/nsp3395P395LcCacTa11B.1.2370.004975
ORF1ab/nsp3395P395LcCacTa11B.1.2390.001221
ORF1ab/nsp3395P395LcCacTa11B.1.258.40.003448
ORF1ab/nsp3395P395LcCacTa11B.1.36.180.00042
ORF1ab/nsp3395P395LcCacTa11B.1.36.290.000517
ORF1ab/nsp3395P395LcCacTa11B.1.3670.000792
ORF1ab/nsp3395P395LcCacTa11B.1.3690.000285
ORF1ab/nsp3395P395LcCacTa11B.1.3810.007812
ORF1ab/nsp3395P395LcCacTa11B.1.3850.010638
ORF1ab/nsp3395P395LcCacTa11B.1.3990.001934
ORF1ab/nsp3395P395LcCacTa11B.1.4000.000429
ORF1ab/nsp3395P395LcCacTa11B.1.4110.003704
ORF1ab/nsp3395P395LcCacTa11B.1.4220.000812
ORF1ab/nsp3395P395LcCacTa11B.1.4280.00102
ORF1ab/nsp3395P395LcCacTa11B.1.5010.007353
ORF1ab/nsp3395P395LcCacTa11B.1.5070.011236
ORF1ab/nsp3395P395LcCacTa11B.1.5240.001406
ORF1ab/nsp3395P395LcCacTa11B.1.5380.008065
ORF1ab/nsp3395P395LcCacTa11B.1.5680.001111
ORF1ab/nsp3395P395LcCacTa11B.1.5750.000303
ORF1ab/nsp3395P395LcCacTa11B.1.5970.00463
ORF1ab/nsp3395P395LcCacTa11B.1.6000.005848
ORF1ab/nsp3395P395LcCacTa11B.1.6250.002353
ORF1ab/nsp3395P395LcCacTa11B.1.9.50.005682
ORF1ab/nsp3395P395LcCacTa11C.300.001727
ORF1ab/nsp3395P395LcCacTa11N.60.007092
ORF1ab/nsp3395P395LcCacTa11P.1.120.000484
ORF1ab/nsp3395P395LcCacTa11P.1.60.001946
ORF1ab/nsp3395P395LcCacTa11P.1.70.000319
ORF1ab/nsp3395P395LcCacTa11P.70.004367