CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P389S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3389P389SP1207SnonsynCctTct455945570.9995613884-3886
ORF1ab/nsp3389P389SP1207SnonsynCcTTcC455920.0004386933884-3886

Details of the mutation P389S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3389P389SCctTct45574559All0.000872
ORF1ab/nsp3389P389SCcTTcC24559All0
ORF1ab/nsp3389P389SCctTct27872787B.1.6280.98203
ORF1ab/nsp3389P389SCctTct346346AY.40.000539
ORF1ab/nsp3389P389SCctTct228228B.1.1.70.000204
ORF1ab/nsp3389P389SCctTct196196B.1.5230.480392
ORF1ab/nsp3389P389SCctTct190190B.1.20.001673
ORF1ab/nsp3389P389SCctTct9898B.10.000898
ORF1ab/nsp3389P389SCctTct9393B.1.617.20.00035
ORF1ab/nsp3389P389SCctTct7676B.1.1.2220.015504
ORF1ab/nsp3389P389SCctTct4141B.1.2430.002853
ORF1ab/nsp3389P389SCctTct4040AY.1030.000248
ORF1ab/nsp3389P389SCctTct3636P.10.000567
ORF1ab/nsp3389P389SCctTct3333AY.250.000198
ORF1ab/nsp3389P389SCctTct2222B.1.4060.133333
ORF1ab/nsp3389P389SCctTct1919AY.1000.000874
ORF1ab/nsp3389P389SCctTct1919AY.440.000116
ORF1ab/nsp3389P389SCctTct1717B.1.3240.027287
ORF1ab/nsp3389P389SCctTct1313AY.980.001027
ORF1ab/nsp3389P389SCctTct1212B.1.2180.061856
ORF1ab/nsp3389P389SCctTct1111B.1.10.0002
ORF1ab/nsp3389P389SCctTct1111B.1.1.5190.000437
ORF1ab/nsp3389P389SCctTct1111P.1.120.005324
ORF1ab/nsp3389P389SCctTct1010AY.230.000697
ORF1ab/nsp3389P389SCctTct1010AY.390.000247
ORF1ab/nsp3389P389SCctTct99B.1.5260.000212
ORF1ab/nsp3389P389SCctTct88AY.20.002849
ORF1ab/nsp3389P389SCctTct88AY.430.000035
ORF1ab/nsp3389P389SCctTct88B.1.2210.000568
ORF1ab/nsp3389P389SCctTct77B.1.4270.000353
ORF1ab/nsp3389P389SCctTct77B.1.6210.00062
ORF1ab/nsp3389P389SCctTct56AY.1190.000177
ORF1ab/nsp3389P389SCcTTcC16AY.1190.000035
ORF1ab/nsp3389P389SCctTct66AY.1200.000223
ORF1ab/nsp3389P389SCctTct66AY.46.60.000433
ORF1ab/nsp3389P389SCctTct66B.1.177.70.000989
ORF1ab/nsp3389P389SCctTct66B.1.36.10.006842
ORF1ab/nsp3389P389SCctTct66B.1.438.10.000644
ORF1ab/nsp3389P389SCctTct66P.1.20.006936
ORF1ab/nsp3389P389SCctTct55AY.1020.000133
ORF1ab/nsp3389P389SCctTct55AY.420.000201
ORF1ab/nsp3389P389SCctTct55AY.46.40.000823
ORF1ab/nsp3389P389SCctTct55AY.470.000156
ORF1ab/nsp3389P389SCctTct55B.1.4290.000118
ORF1ab/nsp3389P389SCctTct44AY.1130.00057
ORF1ab/nsp3389P389SCctTct44AY.16.10.00188
ORF1ab/nsp3389P389SCctTct44AY.410.001176
ORF1ab/nsp3389P389SCctTct44B.1.1770.000053
ORF1ab/nsp3389P389SCctTct44B.1.177.860.000734
ORF1ab/nsp3389P389SCctTct44B.1.6270.008081
ORF1ab/nsp3389P389SCctTct33AY.1160.00086
ORF1ab/nsp3389P389SCctTct33AY.330.0002
ORF1ab/nsp3389P389SCctTct33AY.60.000123
ORF1ab/nsp3389P389SCctTct33C.370.000348
ORF1ab/nsp3389P389SCctTct33P.1.10.000953
ORF1ab/nsp3389P389SCctTct33P.20.00056
ORF1ab/nsp3389P389SCctTct33R.10.00027
ORF1ab/nsp3389P389SCcTTcC120.055556
ORF1ab/nsp3389P389SCctTct120.055556
ORF1ab/nsp3389P389SCctTct22AY.1170.000169
ORF1ab/nsp3389P389SCctTct22AY.290.000032
ORF1ab/nsp3389P389SCctTct22AY.300.000791
ORF1ab/nsp3389P389SCctTct22AY.360.000296
ORF1ab/nsp3389P389SCctTct22AY.4.20.000043
ORF1ab/nsp3389P389SCctTct22AY.700.000417
ORF1ab/nsp3389P389SCctTct22B.1.1.280.000622
ORF1ab/nsp3389P389SCctTct22B.1.177.160.001329
ORF1ab/nsp3389P389SCctTct22B.1.36.290.001035
ORF1ab/nsp3389P389SCctTct22B.1.5960.000174
ORF1ab/nsp3389P389SCctTct22B.1.6370.000146
ORF1ab/nsp3389P389SCctTct22C.20.032258
ORF1ab/nsp3389P389SCctTct22D.20.00015
ORF1ab/nsp3389P389SCctTct22W.30.010526
ORF1ab/nsp3389P389SCctTct22Z.10.00578
ORF1ab/nsp3389P389SCctTct11A.2.40.003367
ORF1ab/nsp3389P389SCctTct11AY.1110.000183
ORF1ab/nsp3389P389SCctTct11AY.1140.000231
ORF1ab/nsp3389P389SCctTct11AY.1180.000063
ORF1ab/nsp3389P389SCctTct11AY.200.000039
ORF1ab/nsp3389P389SCctTct11AY.260.000028
ORF1ab/nsp3389P389SCctTct11AY.30.00001
ORF1ab/nsp3389P389SCctTct11AY.3.10.000085
ORF1ab/nsp3389P389SCctTct11AY.340.000097
ORF1ab/nsp3389P389SCctTct11AY.4.2.10.000149
ORF1ab/nsp3389P389SCctTct11AY.4.50.000107
ORF1ab/nsp3389P389SCctTct11AY.460.000104
ORF1ab/nsp3389P389SCctTct11AY.50.000021
ORF1ab/nsp3389P389SCctTct11AY.580.000907
ORF1ab/nsp3389P389SCctTct11AY.610.000105
ORF1ab/nsp3389P389SCctTct11AY.620.000436
ORF1ab/nsp3389P389SCctTct11AY.630.000387
ORF1ab/nsp3389P389SCctTct11AY.7.20.000559
ORF1ab/nsp3389P389SCctTct11AY.750.000056
ORF1ab/nsp3389P389SCctTct11AY.770.001127
ORF1ab/nsp3389P389SCctTct11AY.9.20.000037
ORF1ab/nsp3389P389SCctTct11AY.98.10.000048
ORF1ab/nsp3389P389SCctTct11B0.000128
ORF1ab/nsp3389P389SCctTct11B.1.1.1170.009709
ORF1ab/nsp3389P389SCctTct11B.1.1.2140.000055
ORF1ab/nsp3389P389SCctTct11B.1.1.2160.00089
ORF1ab/nsp3389P389SCctTct11B.1.1.2940.001266
ORF1ab/nsp3389P389SCctTct11B.1.1030.019231
ORF1ab/nsp3389P389SCctTct11B.1.1600.000031
ORF1ab/nsp3389P389SCctTct11B.1.177.560.000668
ORF1ab/nsp3389P389SCctTct11B.1.177.60.000977
ORF1ab/nsp3389P389SCctTct11B.1.2320.000537
ORF1ab/nsp3389P389SCctTct11B.1.2340.000132
ORF1ab/nsp3389P389SCctTct11B.1.258.170.000104
ORF1ab/nsp3389P389SCctTct11B.1.3510.00003
ORF1ab/nsp3389P389SCctTct11B.1.360.000146
ORF1ab/nsp3389P389SCctTct11B.1.36.160.001425
ORF1ab/nsp3389P389SCctTct11B.1.36.80.001
ORF1ab/nsp3389P389SCctTct11B.1.3670.000792
ORF1ab/nsp3389P389SCctTct11B.1.4080.00369
ORF1ab/nsp3389P389SCctTct11B.1.4280.00102
ORF1ab/nsp3389P389SCctTct11B.1.5440.006024
ORF1ab/nsp3389P389SCctTct11B.1.5610.000397
ORF1ab/nsp3389P389SCctTct11B.1.5800.004065
ORF1ab/nsp3389P389SCctTct11B.1.6330.041667
ORF1ab/nsp3389P389SCctTct11P.1.140.000048
ORF1ab/nsp3389P389SCctTct11Q.10.000126
ORF1ab/nsp3389P389SCctTct11Q.40.000455
ORF1ab/nsp3389P389SCctTct11U.30.003861