CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P1558del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31558P1558del2P2376del2delCCg--g430.757391-7393
ORF1ab/nsp31558P1558del2P2376del2delCCG--C410.257391-7393

Details of the mutation P1558del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31558P1558del2CCg--g34All0.000001
ORF1ab/nsp31558P1558del2CCG--C14All0
ORF1ab/nsp31558P1558del2CCg--g11AY.1130.000142
ORF1ab/nsp31558P1558del2CCg--g11AY.60.000041
ORF1ab/nsp31558P1558del2CCG--C11B.1.10.000018
ORF1ab/nsp31558P1558del2CCg--g11B.1.617.20.000004