CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P1558del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31558P1558del1P2376del1delccGcc-530.67391-7393
ORF1ab/nsp31558P1558del1P2376del1delCcg-cg520.47391-7393

Details of the mutation P1558del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31558P1558del1ccGcc-35All0.000001
ORF1ab/nsp31558P1558del1Ccg-cg25All0
ORF1ab/nsp31558P1558del1Ccg-cg12AY.40.000002
ORF1ab/nsp31558P1558del1ccGcc-12AY.40.000002
ORF1ab/nsp31558P1558del1ccGcc-11B.1.1.70.000001
ORF1ab/nsp31558P1558del1Ccg-cg11B.1.1.700.000341
ORF1ab/nsp31558P1558del1ccGcc-11B.1.3110.000275