CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P1558del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31558P1558delP2376deldelCCG---939317391-7393

Details of the mutation P1558del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31558P1558delCCG---9393All0.000018
ORF1ab/nsp31558P1558delCCG---3636B.1.1.70.000032
ORF1ab/nsp31558P1558delCCG---77B.10.000064
ORF1ab/nsp31558P1558delCCG---55AY.40.000008
ORF1ab/nsp31558P1558delCCG---33B.1.617.20.000011
ORF1ab/nsp31558P1558delCCG---22AY.250.000012
ORF1ab/nsp31558P1558delCCG---22AY.350.000466
ORF1ab/nsp31558P1558delCCG---22AY.430.000009
ORF1ab/nsp31558P1558delCCG---22AY.750.000112
ORF1ab/nsp31558P1558delCCG---11AY.1030.000006
ORF1ab/nsp31558P1558delCCG---11AY.4.50.000107
ORF1ab/nsp31558P1558delCCG---11AY.420.00004
ORF1ab/nsp31558P1558delCCG---11AY.440.000006
ORF1ab/nsp31558P1558delCCG---11AY.460.000104
ORF1ab/nsp31558P1558delCCG---11AY.46.60.000072
ORF1ab/nsp31558P1558delCCG---11AY.470.000031
ORF1ab/nsp31558P1558delCCG---11AY.60.000041
ORF1ab/nsp31558P1558delCCG---11AY.660.00107
ORF1ab/nsp31558P1558delCCG---11AY.75.10.00018
ORF1ab/nsp31558P1558delCCG---11AY.90.000068
ORF1ab/nsp31558P1558delCCG---11AY.99.10.001553
ORF1ab/nsp31558P1558delCCG---11B.1.10.000018
ORF1ab/nsp31558P1558delCCG---11B.1.1.3110.000358
ORF1ab/nsp31558P1558delCCG---11B.1.1.3150.008475
ORF1ab/nsp31558P1558delCCG---11B.1.1.4480.002033
ORF1ab/nsp31558P1558delCCG---11B.1.1.460.004367
ORF1ab/nsp31558P1558delCCG---11B.1.1.510.001718
ORF1ab/nsp31558P1558delCCG---11B.1.1400.018868
ORF1ab/nsp31558P1558delCCG---11B.1.1610.017241
ORF1ab/nsp31558P1558delCCG---11B.1.1770.000013
ORF1ab/nsp31558P1558delCCG---11B.1.177.510.004566
ORF1ab/nsp31558P1558delCCG---11B.1.177.560.000668
ORF1ab/nsp31558P1558delCCG---11B.1.177.630.002703
ORF1ab/nsp31558P1558delCCG---11B.1.177.690.001484
ORF1ab/nsp31558P1558delCCG---11B.1.20.000009
ORF1ab/nsp31558P1558delCCG---11B.1.230.006061
ORF1ab/nsp31558P1558delCCG---11B.1.2580.000067
ORF1ab/nsp31558P1558delCCG---11B.1.258.160.001637
ORF1ab/nsp31558P1558delCCG---11B.1.3510.00003
ORF1ab/nsp31558P1558delCCG---11B.1.5610.000397
ORF1ab/nsp31558P1558delCCG---11B.1.6210.000089
ORF1ab/nsp31558P1558delCCG---11B.340.013699
ORF1ab/nsp31558P1558delCCG---11Q.80.000165