CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P1558S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31558P1558SP2376SnonsynCcgTcg12312317391-7393

Details of the mutation P1558S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31558P1558SCcgTcg123123All0.000024
ORF1ab/nsp31558P1558SCcgTcg5757AY.40.000089
ORF1ab/nsp31558P1558SCcgTcg1212B.1.20.000106
ORF1ab/nsp31558P1558SCcgTcg77B.1.1.70.000006
ORF1ab/nsp31558P1558SCcgTcg33AY.1000.000138
ORF1ab/nsp31558P1558SCcgTcg33AY.70.000588
ORF1ab/nsp31558P1558SCcgTcg33B.1.617.20.000011
ORF1ab/nsp31558P1558SCcgTcg22AY.1030.000012
ORF1ab/nsp31558P1558SCcgTcg22AY.140.000176
ORF1ab/nsp31558P1558SCcgTcg22AY.250.000012
ORF1ab/nsp31558P1558SCcgTcg22AY.30.00002
ORF1ab/nsp31558P1558SCcgTcg22AY.430.000009
ORF1ab/nsp31558P1558SCcgTcg22AY.460.000208
ORF1ab/nsp31558P1558SCcgTcg22AY.5.30.000675
ORF1ab/nsp31558P1558SCcgTcg22B.1.1.5190.000079
ORF1ab/nsp31558P1558SCcgTcg22D.20.00015
ORF1ab/nsp31558P1558SCcgTcg11A.50.001923
ORF1ab/nsp31558P1558SCcgTcg11AY.1020.000027
ORF1ab/nsp31558P1558SCcgTcg11AY.130.000161
ORF1ab/nsp31558P1558SCcgTcg11AY.160.00038
ORF1ab/nsp31558P1558SCcgTcg11AY.270.000065
ORF1ab/nsp31558P1558SCcgTcg11AY.290.000016
ORF1ab/nsp31558P1558SCcgTcg11AY.330.000067
ORF1ab/nsp31558P1558SCcgTcg11AY.390.000025
ORF1ab/nsp31558P1558SCcgTcg11AY.39.10.00004
ORF1ab/nsp31558P1558SCcgTcg11AY.420.00004
ORF1ab/nsp31558P1558SCcgTcg11AY.50.000021
ORF1ab/nsp31558P1558SCcgTcg11B.10.000009
ORF1ab/nsp31558P1558SCcgTcg11B.1.10.000018
ORF1ab/nsp31558P1558SCcgTcg11B.1.1.1130.006993
ORF1ab/nsp31558P1558SCcgTcg11B.1.1.1640.005155
ORF1ab/nsp31558P1558SCcgTcg11B.1.1770.000013
ORF1ab/nsp31558P1558SCcgTcg11B.1.2320.000537
ORF1ab/nsp31558P1558SCcgTcg11B.1.5950.000261
ORF1ab/nsp31558P1558SCcgTcg11B.1.617.10.000129
ORF1ab/nsp31558P1558SCcgTcg11P.1.10.000318