CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 153 | P153S | P971S | nonsyn | Cct | Tct | 6044 | 6044 | 1 | 3176-3178 |
Details of the mutation P153S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 6044 | 6044 | All | 0.001156 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1666 | 1666 | B.1.1.7 | 0.001491 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 691 | 691 | AY.4 | 0.001075 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 651 | 651 | B.1.568 | 0.723333 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 354 | 354 | AY.120 | 0.013161 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 332 | 332 | AY.43 | 0.001471 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 187 | 187 | B.1.2 | 0.001647 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 168 | 168 | B.1.617.2 | 0.000633 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 159 | 159 | B.1.177 | 0.002094 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 138 | 138 | AY.44 | 0.00084 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 104 | 104 | AY.75 | 0.005826 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 82 | 82 | AY.103 | 0.000509 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 64 | 64 | B.1.160 | 0.001996 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 61 | 61 | B.1 | 0.000559 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 55 | 55 | P.1 | 0.000866 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 54 | 54 | AY.25 | 0.000325 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 46 | 46 | B.1.1.232 | 0.083485 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 46 | 46 | B.1.429 | 0.001082 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 44 | 44 | AY.3 | 0.000438 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 40 | 40 | AY.109 | 0.029586 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 40 | 40 | B.1.1 | 0.000726 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 39 | 39 | B.1.351 | 0.001159 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 32 | 32 | B.1.243 | 0.002227 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 32 | 32 | B.1.36.9 | 0.102894 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 30 | 30 | B.1.427 | 0.001515 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 29 | 29 | P.1.15 | 0.006738 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 25 | 25 | AY.100 | 0.00115 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 21 | 21 | AY.102 | 0.000557 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 21 | 21 | AY.46.6 | 0.001516 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 21 | 21 | B.1.1.351 | 0.058659 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 20 | 20 | AY.5 | 0.000413 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 19 | 19 | B.1.526 | 0.000447 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 16 | 16 | AY.29 | 0.000252 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 16 | 16 | AY.39 | 0.000395 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 16 | 16 | AY.46.4 | 0.002632 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 16 | 16 | AY.61 | 0.001676 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 16 | 16 | B.1.234 | 0.002111 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 15 | 15 | AY.71 | 0.007126 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 15 | 15 | AY.99.2 | 0.001382 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 15 | 15 | B.1.177.4 | 0.003166 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 15 | 15 | B.1.36 | 0.002189 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 15 | 15 | B.1.609 | 0.007191 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 14 | 14 | AY.108 | 0.015436 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 14 | 14 | AY.80 | 0.015801 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 14 | 14 | B.1.1.519 | 0.000556 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 14 | 14 | C.37 | 0.001625 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 13 | 13 | B.1.525 | 0.001471 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 12 | 12 | AY.4.2 | 0.00026 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 12 | 12 | AY.47 | 0.000373 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 12 | 12 | B.1.1.311 | 0.004298 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 12 | 12 | B.6 | 0.010919 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 11 | 11 | AY.42 | 0.000443 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 10 | 10 | AY.117 | 0.000845 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 10 | 10 | AY.119 | 0.000353 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 10 | 10 | AY.121 | 0.001353 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 10 | 10 | AY.67 | 0.004643 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 9 | 9 | AY.26 | 0.000255 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 9 | 9 | AY.33 | 0.000601 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 9 | 9 | B.1.1.222 | 0.001836 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 9 | 9 | B.1.221 | 0.000639 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 9 | 9 | B.1.258.17 | 0.000936 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 8 | 8 | B.1.1.294 | 0.010127 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 8 | 8 | B.1.1.462 | 0.068966 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 8 | 8 | B.1.396 | 0.005646 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 8 | 8 | B.1.595 | 0.002088 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 8 | 8 | B.1.596 | 0.000697 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 8 | 8 | Q.1 | 0.001011 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 7 | 7 | AY.19 | 0.007982 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 7 | 7 | AY.99 | 0.007345 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 7 | 7 | D.2 | 0.000525 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 7 | 7 | Q.3 | 0.001015 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 6 | 6 | AY.9.2 | 0.00022 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 6 | 6 | B.1.1.28 | 0.001867 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 6 | 6 | B.1.621 | 0.000531 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 6 | 6 | P.1.14 | 0.000287 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 5 | 5 | AY.118 | 0.000313 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 5 | 5 | AY.20 | 0.000194 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 5 | 5 | AY.34 | 0.000485 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 5 | 5 | B.1.177.32 | 0.006748 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 5 | 5 | B.1.438.1 | 0.000536 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 5 | 5 | B.1.582 | 0.002453 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 5 | 5 | P.1.7 | 0.001596 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 5 | 5 | Q.4 | 0.002274 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 4 | 4 | AY.111 | 0.000733 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 4 | 4 | AY.36 | 0.000593 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 4 | 4 | AY.39.1 | 0.000158 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 4 | 4 | AY.45 | 0.000487 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 4 | 4 | AY.46 | 0.000416 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 4 | 4 | AY.92 | 0.001149 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 4 | 4 | AY.98 | 0.000316 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 4 | 4 | B.1.1.63 | 0.001543 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 4 | 4 | B.1.165 | 0.047619 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 4 | 4 | B.1.240 | 0.000862 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 4 | 4 | B.1.258.11 | 0.001585 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 4 | 4 | B.1.575 | 0.001214 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 4 | 4 | B.1.637 | 0.000292 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | AY.116 | 0.00086 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | AY.13 | 0.000483 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | AY.14 | 0.000264 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | AY.59 | 0.001589 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | AY.75.1 | 0.000541 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | B.1.1.301 | 0.003538 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | B.1.1.318 | 0.000905 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | B.1.1.33 | 0.001263 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | B.1.1.523 | 0.004687 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | B.1.161 | 0.051724 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | B.1.258 | 0.0002 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | B.1.337 | 0.01676 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | B.1.564 | 0.001278 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | B.1.612 | 0.007958 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 3 | 3 | B.1.617.1 | 0.000387 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | A.2.5 | 0.000998 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | AY.106 | 0.00067 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | AY.114 | 0.000462 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | AY.23.1 | 0.000835 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | AY.34.1 | 0.00102 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | AY.78 | 0.003082 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | AY.87 | 0.001665 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | AY.93 | 0.000546 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.1.1 | 0.000653 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.1.216 | 0.001781 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.1.303 | 0.005525 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.1.37 | 0.000386 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.1.39 | 0.001019 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.1.70 | 0.000682 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.131 | 0.017544 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.177.21 | 0.000153 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.320 | 0.002491 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.389 | 0.002004 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.400 | 0.000858 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.403 | 0.006536 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.409 | 0.001563 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.459 | 0.008163 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.1.549 | 0.014388 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | B.40 | 0.000729 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | C.1.2 | 0.008511 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | N.4 | 0.008511 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | P.1.12 | 0.000968 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | P.3 | 0.00319 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | A | 0.000387 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AE.6 | 0.038462 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.31 | 0.018519 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.4.1 | 0.000737 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | AZ.3 | 0.00152 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.113 | 0.006993 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.141 | 0.002012 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.181 | 0.004545 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.253 | 0.002506 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.279 | 0.001121 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.337 | 0.003597 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.375 | 0.011905 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.377 | 0.001381 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.442 | 0.018519 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.1.521 | 0.005348 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.177.11 | 0.001698 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.199 | 0.004132 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.220 | 0.01087 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.23 | 0.006061 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.258.16 | 0.001637 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.351.5 | 0.0006 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.36.35 | 0.002604 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.36.39 | 0.002217 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.371 | 0.001122 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.391 | 0.001127 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.398 | 0.002976 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.544 | 0.006024 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.590 | 0.004545 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.605 | 0.005952 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.611 | 0.04 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.9.4 | 0.006135 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.1.9.5 | 0.005682 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.11 | 0.005128 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.3.1 | 0.001658 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | N.9 | 0.005952 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | Q.5 | 0.016949 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | Q.6 | 0.006623 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | R.1 | 0.00009 |
ORF1ab/nsp3 | 153 | P153S | Cct | Tct | 1 | 1 | W.3 | 0.005263 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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