CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P153P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3153P153PP971PsynccTccC3923110.7933673176-3178
ORF1ab/nsp3153P153PP971PsynccTccA392560.1428573176-3178
ORF1ab/nsp3153P153PP971PsynccTccG392250.06377553176-3178

Details of the mutation P153P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3153P153PccTccC311392All0.000059
ORF1ab/nsp3153P153PccTccA56392All0.000011
ORF1ab/nsp3153P153PccTccG25392All0.000005
ORF1ab/nsp3153P153PccTccC4646AY.430.000204
ORF1ab/nsp3153P153PccTccC3542B.10.000321
ORF1ab/nsp3153P153PccTccG442B.10.000037
ORF1ab/nsp3153P153PccTccA342B.10.000027
ORF1ab/nsp3153P153PccTccC3636AY.1180.002255
ORF1ab/nsp3153P153PccTccC2235B.1.1.70.00002
ORF1ab/nsp3153P153PccTccA1135B.1.1.70.00001
ORF1ab/nsp3153P153PccTccG235B.1.1.70.000002
ORF1ab/nsp3153P153PccTccC3434AY.40.000053
ORF1ab/nsp3153P153PccTccC2222AY.250.000132
ORF1ab/nsp3153P153PccTccA1719B.1.1770.000224
ORF1ab/nsp3153P153PccTccC219B.1.1770.000026
ORF1ab/nsp3153P153PccTccC1318B.1.617.20.000049
ORF1ab/nsp3153P153PccTccG518B.1.617.20.000019
ORF1ab/nsp3153P153PccTccC1517AY.1020.000398
ORF1ab/nsp3153P153PccTccA217AY.1020.000053
ORF1ab/nsp3153P153PccTccC1212AZ.20.009852
ORF1ab/nsp3153P153PccTccC910AY.1030.000056
ORF1ab/nsp3153P153PccTccA110AY.1030.000006
ORF1ab/nsp3153P153PccTccC710B.1.4290.000165
ORF1ab/nsp3153P153PccTccA310B.1.4290.000071
ORF1ab/nsp3153P153PccTccC810P.10.000126
ORF1ab/nsp3153P153PccTccA210P.10.000032
ORF1ab/nsp3153P153PccTccC55AY.1000.00023
ORF1ab/nsp3153P153PccTccG55AY.130.000805
ORF1ab/nsp3153P153PccTccA24AY.30.00002
ORF1ab/nsp3153P153PccTccG24AY.30.00002
ORF1ab/nsp3153P153PccTccC44AY.440.000024
ORF1ab/nsp3153P153PccTccC44B.1.10.000073
ORF1ab/nsp3153P153PccTccC44B.1.1.1390.090909
ORF1ab/nsp3153P153PccTccA23AY.98.10.000097
ORF1ab/nsp3153P153PccTccC13AY.98.10.000048
ORF1ab/nsp3153P153PccTccC23B.1.20.000018
ORF1ab/nsp3153P153PccTccG13B.1.20.000009
ORF1ab/nsp3153P153PccTccA22A.190.018868
ORF1ab/nsp3153P153PccTccC22AY.1100.000225
ORF1ab/nsp3153P153PccTccC22AY.260.000057
ORF1ab/nsp3153P153PccTccC12AY.39.10.00004
ORF1ab/nsp3153P153PccTccG12AY.39.10.00004
ORF1ab/nsp3153P153PccTccA22B.1.177.600.000437
ORF1ab/nsp3153P153PccTccG12B.1.3510.00003
ORF1ab/nsp3153P153PccTccC12B.1.3510.00003
ORF1ab/nsp3153P153PccTccC22B.1.3610.002577
ORF1ab/nsp3153P153PccTccC12B.1.5260.000024
ORF1ab/nsp3153P153PccTccA12B.1.5260.000024
ORF1ab/nsp3153P153PccTccC22B.1.6370.000146
ORF1ab/nsp3153P153PccTccC110.055556
ORF1ab/nsp3153P153PccTccA11A.10.000282
ORF1ab/nsp3153P153PccTccC11AY.1210.000135
ORF1ab/nsp3153P153PccTccC11AY.290.000016
ORF1ab/nsp3153P153PccTccA11AY.4.50.000107
ORF1ab/nsp3153P153PccTccC11AY.470.000031
ORF1ab/nsp3153P153PccTccG11AY.50.000021
ORF1ab/nsp3153P153PccTccC11AY.610.000105
ORF1ab/nsp3153P153PccTccG11AY.750.000056
ORF1ab/nsp3153P153PccTccC11AY.80.000606
ORF1ab/nsp3153P153PccTccC11AY.800.001129
ORF1ab/nsp3153P153PccTccG11B0.000128
ORF1ab/nsp3153P153PccTccC11B.1.1.1760.000439
ORF1ab/nsp3153P153PccTccC11B.1.1.1940.00495
ORF1ab/nsp3153P153PccTccC11B.1.1.280.000311
ORF1ab/nsp3153P153PccTccG11B.1.1.3170.000412
ORF1ab/nsp3153P153PccTccC11B.1.1.5260.003546
ORF1ab/nsp3153P153PccTccA11B.1.1.630.000386
ORF1ab/nsp3153P153PccTccC11B.1.1040.00369
ORF1ab/nsp3153P153PccTccC11B.1.1600.000031
ORF1ab/nsp3153P153PccTccC11B.1.177.810.000189
ORF1ab/nsp3153P153PccTccC11B.1.177.860.000183
ORF1ab/nsp3153P153PccTccA11B.1.2230.002778
ORF1ab/nsp3153P153PccTccC11B.1.36.90.003215
ORF1ab/nsp3153P153PccTccC11B.1.4090.000781
ORF1ab/nsp3153P153PccTccC11B.1.5950.000261
ORF1ab/nsp3153P153PccTccA11B.1.6210.000089
ORF1ab/nsp3153P153PccTccA11B.1.6280.000352
ORF1ab/nsp3153P153PccTccA11D.20.000075
ORF1ab/nsp3153P153PccTccA11P.1.70.000319
ORF1ab/nsp3153P153PccTccC11R.10.00009