CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P153L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3153P153LP971LnonsyncCtcTt41277412740.9999273176-3178
ORF1ab/nsp3153P153LP971LnonsyncCTcTC4127730.00007267973176-3178

Details of the mutation P153L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3153P153LcCtcTt4127441277All0.007894
ORF1ab/nsp3153P153LcCTcTC341277All0.000001
ORF1ab/nsp3153P153LcCtcTt3207532076B.1.1.70.028714
ORF1ab/nsp3153P153LcCTcTC132076B.1.1.70.000001
ORF1ab/nsp3153P153LcCtcTt698698A0.270124
ORF1ab/nsp3153P153LcCtcTt634634P.1.140.030306
ORF1ab/nsp3153P153LcCtcTt607607AY.40.000945
ORF1ab/nsp3153P153LcCtcTt524524B.1.617.20.001973
ORF1ab/nsp3153P153LcCtcTt489489B.1.20.004306
ORF1ab/nsp3153P153LcCtcTt476476A.30.997904
ORF1ab/nsp3153P153LcCtcTt357359B.1.10.006476
ORF1ab/nsp3153P153LcCTcTC2359B.1.10.000036
ORF1ab/nsp3153P153LcCtcTt354354AY.250.002129
ORF1ab/nsp3153P153LcCtcTt349349B.1.2340.046048
ORF1ab/nsp3153P153LcCtcTt290290P.10.004569
ORF1ab/nsp3153P153LcCtcTt273273AY.440.001662
ORF1ab/nsp3153P153LcCtcTt263263P.41
ORF1ab/nsp3153P153LcCtcTt243243AY.1180.015224
ORF1ab/nsp3153P153LcCtcTt242242B.1.2430.016839
ORF1ab/nsp3153P153LcCtcTt190190AY.430.000842
ORF1ab/nsp3153P153LcCtcTt158158B.10.001447
ORF1ab/nsp3153P153LcCtcTt144144AY.290.002271
ORF1ab/nsp3153P153LcCtcTt126126AY.30.001253
ORF1ab/nsp3153P153LcCtcTt111111AY.39.10.004397
ORF1ab/nsp3153P153LcCtcTt109109B.1.1770.001435
ORF1ab/nsp3153P153LcCtcTt105105AY.1030.000652
ORF1ab/nsp3153P153LcCtcTt8080AY.390.001977
ORF1ab/nsp3153P153LcCtcTt7272AY.46.60.005199
ORF1ab/nsp3153P153LcCtcTt6969AY.450.008396
ORF1ab/nsp3153P153LcCtcTt6565B.1.1.5190.002581
ORF1ab/nsp3153P153LcCtcTt6363B.1.4290.001482
ORF1ab/nsp3153P153LcCtcTt6262Q.10.007832
ORF1ab/nsp3153P153LcCtcTt5858AY.4.20.001258
ORF1ab/nsp3153P153LcCtcTt5757AY.470.001773
ORF1ab/nsp3153P153LcCtcTt5555AY.330.003673
ORF1ab/nsp3153P153LcCtcTt5353AY.1000.002438
ORF1ab/nsp3153P153LcCtcTt5353AY.98.10.002567
ORF1ab/nsp3153P153LcCtcTt4949B.1.2580.003261
ORF1ab/nsp3153P153LcCtcTt4444AU.10.055696
ORF1ab/nsp3153P153LcCtcTt3939AY.260.001104
ORF1ab/nsp3153P153LcCtcTt3838AY.50.000785
ORF1ab/nsp3153P153LcCtcTt3838AY.5.30.012821
ORF1ab/nsp3153P153LcCtcTt3737B.1.1.1630.282443
ORF1ab/nsp3153P153LcCtcTt3737B.1.1.1680.973684
ORF1ab/nsp3153P153LcCtcTt3737B.1.3510.0011
ORF1ab/nsp3153P153LcCtcTt3333B.1.3690.009412
ORF1ab/nsp3153P153LcCtcTt3131AY.1200.001153
ORF1ab/nsp3153P153LcCtcTt3131B.1.5260.000729
ORF1ab/nsp3153P153LcCtcTt3030AA.10.217391
ORF1ab/nsp3153P153LcCtcTt3030AY.460.003122
ORF1ab/nsp3153P153LcCtcTt2929AY.1020.000769
ORF1ab/nsp3153P153LcCtcTt2828C.370.00325
ORF1ab/nsp3153P153LcCtcTt2727B.1.4270.001363
ORF1ab/nsp3153P153LcCtcTt2626B.1.6370.0019
ORF1ab/nsp3153P153LcCtcTt2424B.1.258.170.002495
ORF1ab/nsp3153P153LcCtcTt2323AY.200.000894
ORF1ab/nsp3153P153LcCtcTt2323B.1.1600.000717
ORF1ab/nsp3153P153LcCtcTt2323B.1.351.30.020158
ORF1ab/nsp3153P153LcCtcTt2222B.1.3110.006041
ORF1ab/nsp3153P153LcCtcTt2121AY.650.011194
ORF1ab/nsp3153P153LcCtcTt2121B.1.177.440.010898
ORF1ab/nsp3153P153LcCtcTt2020AY.370.006321
ORF1ab/nsp3153P153LcCtcTt1919AY.34.10.009689
ORF1ab/nsp3153P153LcCtcTt1919AY.750.001064
ORF1ab/nsp3153P153LcCtcTt1818B.1.1.2560.246575
ORF1ab/nsp3153P153LcCtcTt1818B.1.5950.004697
ORF1ab/nsp3153P153LcCtcTt1616AY.1210.002165
ORF1ab/nsp3153P153LcCtcTt1616B.1.4090.0125
ORF1ab/nsp3153P153LcCtcTt1616B.1.5770.010997
ORF1ab/nsp3153P153LcCtcTt1515AY.3.10.001279
ORF1ab/nsp3153P153LcCtcTt1515B.1.360.002189
ORF1ab/nsp3153P153LcCtcTt1515B.1.6210.001328
ORF1ab/nsp3153P153LcCtcTt1414AY.140.001232
ORF1ab/nsp3153P153LcCtcTt1414B.1.1390.010264
ORF1ab/nsp3153P153LcCtcTt1414B.1.2210.000994
ORF1ab/nsp3153P153LcCtcTt1313AY.1170.001099
ORF1ab/nsp3153P153LcCtcTt1313AY.590.006886
ORF1ab/nsp3153P153LcCtcTt1313B.1.1.3060.005699
ORF1ab/nsp3153P153LcCtcTt1313P.20.002426
ORF1ab/nsp3153P153LcCtcTt1313Q.30.001885
ORF1ab/nsp3153P153LcCtcTt1212AY.1190.000424
ORF1ab/nsp3153P153LcCtcTt1212AY.230.000837
ORF1ab/nsp3153P153LcCtcTt1212AY.9.10.001005
ORF1ab/nsp3153P153LcCtcTt1212B.1.351.20.003631
ORF1ab/nsp3153P153LcCtcTt1111AY.610.001153
ORF1ab/nsp3153P153LcCtcTt1111AY.620.004793
ORF1ab/nsp3153P153LcCtcTt1111B.1.1.250.006254
ORF1ab/nsp3153P153LcCtcTt1010AY.9.20.000367
ORF1ab/nsp3153P153LcCtcTt1010B0.001278
ORF1ab/nsp3153P153LcCtcTt1010B.1.1.280.003112
ORF1ab/nsp3153P153LcCtcTt1010B.1.1.3330.010764
ORF1ab/nsp3153P153LcCtcTt99A.2.50.004491
ORF1ab/nsp3153P153LcCtcTt99AY.670.004178
ORF1ab/nsp3153P153LcCtcTt99AZ.20.007389
ORF1ab/nsp3153P153LcCtcTt99B.1.177.210.000688
ORF1ab/nsp3153P153LcCtcTt99B.1.36.290.004656
ORF1ab/nsp3153P153LcCtcTt88B.1.1.4090.022663
ORF1ab/nsp3153P153LcCtcTt88B.1.1.630.003086
ORF1ab/nsp3153P153LcCtcTt88B.1.177.330.013158
ORF1ab/nsp3153P153LcCtcTt88B.1.2100.017058
ORF1ab/nsp3153P153LcCtcTt88B.1.564.10.012618
ORF1ab/nsp3153P153LcCtcTt77AY.420.000282
ORF1ab/nsp3153P153LcCtcTt77AY.46.40.001152
ORF1ab/nsp3153P153LcCtcTt77B.1.1.10.002287
ORF1ab/nsp3153P153LcCtcTt77B.1.1.1530.007667
ORF1ab/nsp3153P153LcCtcTt77B.1.1.2250.05036
ORF1ab/nsp3153P153LcCtcTt77B.1.177.120.001062
ORF1ab/nsp3153P153LcCtcTt77B.1.36.350.018229
ORF1ab/nsp3153P153LcCtcTt77B.1.3750.005738
ORF1ab/nsp3153P153LcCtcTt77B.1.4660.162791
ORF1ab/nsp3153P153LcCtcTt77B.1.466.10.05036
ORF1ab/nsp3153P153LcCtcTt77Q.20.004294
ORF1ab/nsp3153P153LcCtcTt77Q.80.001154
ORF1ab/nsp3153P153LcCtcTt66AY.1130.000854
ORF1ab/nsp3153P153LcCtcTt66AY.900.004107
ORF1ab/nsp3153P153LcCtcTt66B.1.5640.002555
ORF1ab/nsp3153P153LcCtcTt66B.1.617.10.000774
ORF1ab/nsp3153P153LcCtcTt66D.20.00045
ORF1ab/nsp3153P153LcCtcTt55AY.700.001043
ORF1ab/nsp3153P153LcCtcTt55AY.980.000395
ORF1ab/nsp3153P153LcCtcTt55AY.99.20.000461
ORF1ab/nsp3153P153LcCtcTt55B.1.1.3160.004625
ORF1ab/nsp3153P153LcCtcTt55B.1.177.870.003639
ORF1ab/nsp3153P153LcCtcTt55B.1.3200.006227
ORF1ab/nsp3153P153LcCtcTt55B.1.36.390.011086
ORF1ab/nsp3153P153LcCtcTt55B.1.5960.000436
ORF1ab/nsp3153P153LcCtcTt55B.1.6230.002682
ORF1ab/nsp3153P153LcCtcTt55P.1.170.000809
ORF1ab/nsp3153P153LcCtcTt55Q.40.002274
ORF1ab/nsp3153P153LcCtcTt55W.40.006757
ORF1ab/nsp3153P153LcCtcTt44AY.1010.001962
ORF1ab/nsp3153P153LcCtcTt44AY.540.000381
ORF1ab/nsp3153P153LcCtcTt44AY.90.00027
ORF1ab/nsp3153P153LcCtcTt44B.1.1.2140.000222
ORF1ab/nsp3153P153LcCtcTt44B.1.1.2220.000816
ORF1ab/nsp3153P153LcCtcTt44B.1.1.330.001684
ORF1ab/nsp3153P153LcCtcTt44B.1.1.370.000771
ORF1ab/nsp3153P153LcCtcTt44B.1.1.700.001364
ORF1ab/nsp3153P153LcCtcTt44B.1.177.70.000659
ORF1ab/nsp3153P153LcCtcTt44B.1.177.810.000757
ORF1ab/nsp3153P153LcCtcTt44B.1.36.80.004
ORF1ab/nsp3153P153LcCtcTt44B.1.438.10.000429
ORF1ab/nsp3153P153LcCtcTt44B.1.5610.001588
ORF1ab/nsp3153P153LcCtcTt44B.1.621.10.002023
ORF1ab/nsp3153P153LcCtcTt44C.350.003096
ORF1ab/nsp3153P153LcCtcTt44P.1.10.001271
ORF1ab/nsp3153P153LcCtcTt44P.1.120.001936
ORF1ab/nsp3153P153LcCtcTt44P.1.70.001277
ORF1ab/nsp3153P153LcCtcTt33AP.10.004505
ORF1ab/nsp3153P153LcCtcTt33AY.1090.002219
ORF1ab/nsp3153P153LcCtcTt33AY.1100.000338
ORF1ab/nsp3153P153LcCtcTt33AY.16.10.00141
ORF1ab/nsp3153P153LcCtcTt33AY.20.001068
ORF1ab/nsp3153P153LcCtcTt33AY.340.000291
ORF1ab/nsp3153P153LcCtcTt33AY.4.50.000322
ORF1ab/nsp3153P153LcCtcTt33AY.410.000882
ORF1ab/nsp3153P153LcCtcTt33AY.46.50.000595
ORF1ab/nsp3153P153LcCtcTt33AY.560.004815
ORF1ab/nsp3153P153LcCtcTt33AY.60.000123
ORF1ab/nsp3153P153LcCtcTt33AY.740.000347
ORF1ab/nsp3153P153LcCtcTt33AY.920.000862
ORF1ab/nsp3153P153LcCtcTt33AZ.50.010526
ORF1ab/nsp3153P153LcCtcTt33B.1.1.1340.034091
ORF1ab/nsp3153P153LcCtcTt33B.1.1.2160.002671
ORF1ab/nsp3153P153LcCtcTt33B.1.1.3690.001339
ORF1ab/nsp3153P153LcCtcTt33B.1.1.5210.016043
ORF1ab/nsp3153P153LcCtcTt33B.1.1460.012712
ORF1ab/nsp3153P153LcCtcTt33B.1.177.600.000655
ORF1ab/nsp3153P153LcCtcTt33B.1.177.750.003122
ORF1ab/nsp3153P153LcCtcTt33B.1.177.770.002179
ORF1ab/nsp3153P153LcCtcTt33B.1.1790.011278
ORF1ab/nsp3153P153LcCtcTt33B.1.2400.000647
ORF1ab/nsp3153P153LcCtcTt33B.1.4080.01107
ORF1ab/nsp3153P153LcCtcTt33B.1.5380.024194
ORF1ab/nsp3153P153LcCtcTt33B.1.5670.01
ORF1ab/nsp3153P153LcCtcTt33B.1.5750.00091
ORF1ab/nsp3153P153LcCtcTt33B.1.6090.001438
ORF1ab/nsp3153P153LcCtcTt33C.36.30.001702
ORF1ab/nsp3153P153LcCtcTt33M.30.230769
ORF1ab/nsp3153P153LcCtcTt33P.1.150.000697
ORF1ab/nsp3153P153LcCtcTt33P.30.004785
ORF1ab/nsp3153P153LcCtcTt22AD.20.000438
ORF1ab/nsp3153P153LcCtcTt22AY.1070.000932
ORF1ab/nsp3153P153LcCtcTt22AY.160.000759
ORF1ab/nsp3153P153LcCtcTt22AY.270.000129
ORF1ab/nsp3153P153LcCtcTt22AY.350.000466
ORF1ab/nsp3153P153LcCtcTt22AY.380.000999
ORF1ab/nsp3153P153LcCtcTt22AY.490.00639
ORF1ab/nsp3153P153LcCtcTt22AY.5.40.000553
ORF1ab/nsp3153P153LcCtcTt22AY.630.000774
ORF1ab/nsp3153P153LcCtcTt22AY.640.00119
ORF1ab/nsp3153P153LcCtcTt22AY.840.000875
ORF1ab/nsp3153P153LcCtcTt22AY.870.001665
ORF1ab/nsp3153P153LcCtcTt22B.1.1.1610.007067
ORF1ab/nsp3153P153LcCtcTt22B.1.1.1700.002494
ORF1ab/nsp3153P153LcCtcTt22B.1.1.2650.006309
ORF1ab/nsp3153P153LcCtcTt22B.1.1.2730.013514
ORF1ab/nsp3153P153LcCtcTt22B.1.1.2840.000215
ORF1ab/nsp3153P153LcCtcTt22B.1.1.2940.002532
ORF1ab/nsp3153P153LcCtcTt22B.1.1.3120.003824
ORF1ab/nsp3153P153LcCtcTt22B.1.1.3560.017094
ORF1ab/nsp3153P153LcCtcTt22B.1.1.3700.025316
ORF1ab/nsp3153P153LcCtcTt22B.1.1.3770.002762
ORF1ab/nsp3153P153LcCtcTt22B.1.177.730.001133
ORF1ab/nsp3153P153LcCtcTt22B.1.2640.024691
ORF1ab/nsp3153P153LcCtcTt22B.1.2650.002541
ORF1ab/nsp3153P153LcCtcTt22B.1.36.360.001204
ORF1ab/nsp3153P153LcCtcTt22B.1.3660.009756
ORF1ab/nsp3153P153LcCtcTt22B.1.3670.001585
ORF1ab/nsp3153P153LcCtcTt22B.1.4000.000858
ORF1ab/nsp3153P153LcCtcTt22B.1.4040.002604
ORF1ab/nsp3153P153LcCtcTt22B.1.4160.002538
ORF1ab/nsp3153P153LcCtcTt22B.1.4530.006472
ORF1ab/nsp3153P153LcCtcTt22B.1.4560.006536
ORF1ab/nsp3153P153LcCtcTt22B.1.466.20.000782
ORF1ab/nsp3153P153LcCtcTt22B.1.4990.002101
ORF1ab/nsp3153P153LcCtcTt22B.1.5760.001813
ORF1ab/nsp3153P153LcCtcTt22B.1.5800.00813
ORF1ab/nsp3153P153LcCtcTt22B.6.60.001778
ORF1ab/nsp3153P153LcCtcTt22N.50.003534
ORF1ab/nsp3153P153LcCtcTt22P.1.40.001953
ORF1ab/nsp3153P153LcCtcTt22P.50.027397
ORF1ab/nsp3153P153LcCtcTt22Q.70.002222
ORF1ab/nsp3153P153LcCtcTt22R.10.00018
ORF1ab/nsp3153P153LcCtcTt110.055556
ORF1ab/nsp3153P153LcCtcTt11A.10.000282
ORF1ab/nsp3153P153LcCtcTt11A.190.009434
ORF1ab/nsp3153P153LcCtcTt11A.20.000662
ORF1ab/nsp3153P153LcCtcTt11A.2.5.20.001572
ORF1ab/nsp3153P153LcCtcTt11A.280.002646
ORF1ab/nsp3153P153LcCtcTt11AE.80.000489
ORF1ab/nsp3153P153LcCtcTt11AT.10.005128
ORF1ab/nsp3153P153LcCtcTt11AY.10.000396
ORF1ab/nsp3153P153LcCtcTt11AY.100.00053
ORF1ab/nsp3153P153LcCtcTt11AY.1060.000335
ORF1ab/nsp3153P153LcCtcTt11AY.1160.000287
ORF1ab/nsp3153P153LcCtcTt11AY.120.2.10.000498
ORF1ab/nsp3153P153LcCtcTt11AY.190.00114
ORF1ab/nsp3153P153LcCtcTt11AY.300.000396
ORF1ab/nsp3153P153LcCtcTt11AY.360.000148
ORF1ab/nsp3153P153LcCtcTt11AY.39.1.10.000725
ORF1ab/nsp3153P153LcCtcTt11AY.39.20.001541
ORF1ab/nsp3153P153LcCtcTt11AY.4.2.10.000149
ORF1ab/nsp3153P153LcCtcTt11AY.4.40.000409
ORF1ab/nsp3153P153LcCtcTt11AY.46.20.000635
ORF1ab/nsp3153P153LcCtcTt11AY.480.000465
ORF1ab/nsp3153P153LcCtcTt11AY.5.20.002463
ORF1ab/nsp3153P153LcCtcTt11AY.680.000274
ORF1ab/nsp3153P153LcCtcTt11AY.70.000196
ORF1ab/nsp3153P153LcCtcTt11AY.730.000665
ORF1ab/nsp3153P153LcCtcTt11AY.75.10.00018
ORF1ab/nsp3153P153LcCtcTt11AY.810.001992
ORF1ab/nsp3153P153LcCtcTt11AY.850.000427
ORF1ab/nsp3153P153LcCtcTt11AY.880.000884
ORF1ab/nsp3153P153LcCtcTt11AY.940.000443
ORF1ab/nsp3153P153LcCtcTt11AY.950.000761
ORF1ab/nsp3153P153LcCtcTt11AY.990.001049
ORF1ab/nsp3153P153LcCtcTt11AZ.40.003356
ORF1ab/nsp3153P153LcCtcTt11B.1.1.1410.002012
ORF1ab/nsp3153P153LcCtcTt11B.1.1.1590.004673
ORF1ab/nsp3153P153LcCtcTt11B.1.1.1710.003676
ORF1ab/nsp3153P153LcCtcTt11B.1.1.2070.001182
ORF1ab/nsp3153P153LcCtcTt11B.1.1.2580.003257
ORF1ab/nsp3153P153LcCtcTt11B.1.1.2770.000759
ORF1ab/nsp3153P153LcCtcTt11B.1.1.2880.001916
ORF1ab/nsp3153P153LcCtcTt11B.1.1.2980.000862
ORF1ab/nsp3153P153LcCtcTt11B.1.1.3010.001179
ORF1ab/nsp3153P153LcCtcTt11B.1.1.3080.011765
ORF1ab/nsp3153P153LcCtcTt11B.1.1.3110.000358
ORF1ab/nsp3153P153LcCtcTt11B.1.1.3480.000796
ORF1ab/nsp3153P153LcCtcTt11B.1.1.3720.000689
ORF1ab/nsp3153P153LcCtcTt11B.1.1.3970.002252
ORF1ab/nsp3153P153LcCtcTt11B.1.1.4320.001266
ORF1ab/nsp3153P153LcCtcTt11B.1.1.4340.000349
ORF1ab/nsp3153P153LcCtcTt11B.1.1.460.004367
ORF1ab/nsp3153P153LcCtcTt11B.1.1.4640.001473
ORF1ab/nsp3153P153LcCtcTt11B.1.1.5260.003546
ORF1ab/nsp3153P153LcCtcTt11B.1.110.30.000718
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