CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P1484P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31484P1484PP2302PsynccTccC6834940.723287169-7171
ORF1ab/nsp31484P1484PP2302PsynccTccG6831710.2503667169-7171
ORF1ab/nsp31484P1484PP2302PsynccTccA683180.02635437169-7171

Details of the mutation P1484P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31484P1484PccTccC494683All0.000094
ORF1ab/nsp31484P1484PccTccG171683All0.000033
ORF1ab/nsp31484P1484PccTccA18683All0.000003
ORF1ab/nsp31484P1484PccTccC206225B.1.1.70.000184
ORF1ab/nsp31484P1484PccTccG19225B.1.1.70.000017
ORF1ab/nsp31484P1484PccTccG130134B.1.20.001145
ORF1ab/nsp31484P1484PccTccC4134B.1.20.000035
ORF1ab/nsp31484P1484PccTccC110110B.1.1.3910.940171
ORF1ab/nsp31484P1484PccTccC5154AY.40.000079
ORF1ab/nsp31484P1484PccTccG354AY.40.000005
ORF1ab/nsp31484P1484PccTccC4646AY.30.000458
ORF1ab/nsp31484P1484PccTccC812B.1.617.20.00003
ORF1ab/nsp31484P1484PccTccA312B.1.617.20.000011
ORF1ab/nsp31484P1484PccTccG112B.1.617.20.000004
ORF1ab/nsp31484P1484PccTccA79AY.430.000031
ORF1ab/nsp31484P1484PccTccG29AY.430.000009
ORF1ab/nsp31484P1484PccTccG36AY.250.000018
ORF1ab/nsp31484P1484PccTccC36AY.250.000018
ORF1ab/nsp31484P1484PccTccC66B.1.10.000109
ORF1ab/nsp31484P1484PccTccC66B.1.5260.000141
ORF1ab/nsp31484P1484PccTccC35B.10.000027
ORF1ab/nsp31484P1484PccTccG25B.10.000018
ORF1ab/nsp31484P1484PccTccC44AY.1180.000251
ORF1ab/nsp31484P1484PccTccC44AY.540.000381
ORF1ab/nsp31484P1484PccTccC44B.1.1.4330.005698
ORF1ab/nsp31484P1484PccTccC33AY.1090.002219
ORF1ab/nsp31484P1484PccTccC33AY.740.000347
ORF1ab/nsp31484P1484PccTccC23B.1.1770.000026
ORF1ab/nsp31484P1484PccTccG13B.1.1770.000013
ORF1ab/nsp31484P1484PccTccC33B.1.9.40.018405
ORF1ab/nsp31484P1484PccTccA120.055556
ORF1ab/nsp31484P1484PccTccC120.055556
ORF1ab/nsp31484P1484PccTccG22AY.1060.00067
ORF1ab/nsp31484P1484PccTccC22AY.4.50.000215
ORF1ab/nsp31484P1484PccTccC22B.1.1.4620.017241
ORF1ab/nsp31484P1484PccTccA22B.1.1.5240.041667
ORF1ab/nsp31484P1484PccTccC22C.370.000232
ORF1ab/nsp31484P1484PccTccG22P.10.000032
ORF1ab/nsp31484P1484PccTccA11AY.1020.000027
ORF1ab/nsp31484P1484PccTccC11AY.1030.000006
ORF1ab/nsp31484P1484PccTccG11AY.1190.000035
ORF1ab/nsp31484P1484PccTccC11AY.1210.000135
ORF1ab/nsp31484P1484PccTccC11AY.240.000431
ORF1ab/nsp31484P1484PccTccC11AY.260.000028
ORF1ab/nsp31484P1484PccTccC11AY.270.000065
ORF1ab/nsp31484P1484PccTccG11AY.290.000016
ORF1ab/nsp31484P1484PccTccC11AY.330.000067
ORF1ab/nsp31484P1484PccTccG11AY.4.20.000022
ORF1ab/nsp31484P1484PccTccC11AY.440.000006
ORF1ab/nsp31484P1484PccTccC11AY.5.30.000337
ORF1ab/nsp31484P1484PccTccC11AY.590.00053
ORF1ab/nsp31484P1484PccTccC11AY.820.001357
ORF1ab/nsp31484P1484PccTccC11AY.850.000427
ORF1ab/nsp31484P1484PccTccC11AY.9.10.000084
ORF1ab/nsp31484P1484PccTccC11B.1.1.1330.008475
ORF1ab/nsp31484P1484PccTccC11B.1.1.1800.010753
ORF1ab/nsp31484P1484PccTccA11B.1.1.1940.00495
ORF1ab/nsp31484P1484PccTccC11B.1.1.2140.000055
ORF1ab/nsp31484P1484PccTccG11B.1.1.250.000569
ORF1ab/nsp31484P1484PccTccC11B.1.1.390.00051
ORF1ab/nsp31484P1484PccTccG11B.1.177.210.000076
ORF1ab/nsp31484P1484PccTccC11B.1.177.600.000218
ORF1ab/nsp31484P1484PccTccC11B.1.2210.000071
ORF1ab/nsp31484P1484PccTccC11B.1.2220.001692
ORF1ab/nsp31484P1484PccTccA11B.1.2430.00007
ORF1ab/nsp31484P1484PccTccC11B.1.3110.000275
ORF1ab/nsp31484P1484PccTccC11B.1.5440.006024
ORF1ab/nsp31484P1484PccTccG11B.1.5960.000087
ORF1ab/nsp31484P1484PccTccA11B.1.6090.000479
ORF1ab/nsp31484P1484PccTccA11B.1.6370.000073