CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P1469S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31469P1469SP2287SnonsynCctTct236502923642960.999697124-7126
ORF1ab/nsp31469P1469SP2287SnonsynCcTTcG23650295670.0002397437124-7126
ORF1ab/nsp31469P1469SP2287SnonsynCcTTcC23650291640.00006934387124-7126
ORF1ab/nsp31469P1469SP2287SnonsynCcTTcA236502920.0000008456567124-7126

Details of the mutation P1469S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31469P1469SCctTct23642962365029All0.4522
ORF1ab/nsp31469P1469SCcTTcG5672365029All0.000108
ORF1ab/nsp31469P1469SCcTTcC1642365029All0.000031
ORF1ab/nsp31469P1469SCcTTcA22365029All0
ORF1ab/nsp31469P1469SCctTct633051633589AY.40.985295
ORF1ab/nsp31469P1469SCcTTcG501633589AY.40.00078
ORF1ab/nsp31469P1469SCcTTcC36633589AY.40.000056
ORF1ab/nsp31469P1469SCcTTcA1633589AY.40.000002
ORF1ab/nsp31469P1469SCctTct221325221435B.1.617.20.83338
ORF1ab/nsp31469P1469SCcTTcC91221435B.1.617.20.000343
ORF1ab/nsp31469P1469SCcTTcG19221435B.1.617.20.000072
ORF1ab/nsp31469P1469SCctTct212727212745AY.430.942479
ORF1ab/nsp31469P1469SCcTTcG18212745AY.430.00008
ORF1ab/nsp31469P1469SCctTct159884159885AY.250.961674
ORF1ab/nsp31469P1469SCcTTcC1159885AY.250.000006
ORF1ab/nsp31469P1469SCctTct154504154517AY.440.940429
ORF1ab/nsp31469P1469SCcTTcC11154517AY.440.000067
ORF1ab/nsp31469P1469SCcTTcG2154517AY.440.000012
ORF1ab/nsp31469P1469SCctTct153496153497AY.1030.953066
ORF1ab/nsp31469P1469SCcTTcC1153497AY.1030.000006
ORF1ab/nsp31469P1469SCctTct9624596246AY.30.95729
ORF1ab/nsp31469P1469SCcTTcC196246AY.30.00001
ORF1ab/nsp31469P1469SCctTct6335363353AY.290.999306
ORF1ab/nsp31469P1469SCctTct4703847038AY.50.971298
ORF1ab/nsp31469P1469SCctTct4564545645AY.4.20.98998
ORF1ab/nsp31469P1469SCctTct3696736976AY.1020.980141
ORF1ab/nsp31469P1469SCcTTcG536976AY.1020.000133
ORF1ab/nsp31469P1469SCcTTcC436976AY.1020.000106
ORF1ab/nsp31469P1469SCctTct3589035890AY.390.886895
ORF1ab/nsp31469P1469SCctTct2708527086AY.1190.956324
ORF1ab/nsp31469P1469SCcTTcC127086AY.1190.000035
ORF1ab/nsp31469P1469SCctTct2647626476AY.1200.984348
ORF1ab/nsp31469P1469SCctTct2477324773AY.39.10.981342
ORF1ab/nsp31469P1469SCctTct2464224645AY.200.957715
ORF1ab/nsp31469P1469SCcTTcC324645AY.200.000117
ORF1ab/nsp31469P1469SCctTct2390523905AY.60.983178
ORF1ab/nsp31469P1469SCctTct2380723810AY.420.957758
ORF1ab/nsp31469P1469SCcTTcG323810AY.420.000121
ORF1ab/nsp31469P1469SCctTct2018120181AY.1000.92846
ORF1ab/nsp31469P1469SCctTct1990419905AY.98.10.963967
ORF1ab/nsp31469P1469SCcTTcC119905AY.98.10.000048
ORF1ab/nsp31469P1469SCctTct1523715237AY.1180.95458
ORF1ab/nsp31469P1469SCctTct1434514349AY.330.95793
ORF1ab/nsp31469P1469SCcTTcC414349AY.330.000267
ORF1ab/nsp31469P1469SCctTct1362813628AY.230.950548
ORF1ab/nsp31469P1469SCctTct1350513505AY.46.60.975161
ORF1ab/nsp31469P1469SCctTct1219012190AY.980.962951
ORF1ab/nsp31469P1469SCctTct1114311143AY.3.10.950038
ORF1ab/nsp31469P1469SCctTct1113211132AY.1170.940838
ORF1ab/nsp31469P1469SCctTct1032110321AY.99.20.951157
ORF1ab/nsp31469P1469SCctTct1000710007AY.340.970329
ORF1ab/nsp31469P1469SCctTct90739073AY.4.50.975277
ORF1ab/nsp31469P1469SCctTct87288728AY.7.10.983658
ORF1ab/nsp31469P1469SCctTct83988415C.370.974698
ORF1ab/nsp31469P1469SCcTTcG178415C.370.001973
ORF1ab/nsp31469P1469SCctTct83078308AY.460.864592
ORF1ab/nsp31469P1469SCcTTcC18308AY.460.000104
ORF1ab/nsp31469P1469SCctTct69126913AY.450.841081
ORF1ab/nsp31469P1469SCcTTcC16913AY.450.000122
ORF1ab/nsp31469P1469SCctTct68766876AY.1210.930447
ORF1ab/nsp31469P1469SCctTct65816581AY.1130.937064
ORF1ab/nsp31469P1469SCctTct65386539AY.4.2.10.974076
ORF1ab/nsp31469P1469SCcTTcG16539AY.4.2.10.000149
ORF1ab/nsp31469P1469SCctTct63976397AY.360.948125
ORF1ab/nsp31469P1469SCctTct59285929AY.46.40.97516
ORF1ab/nsp31469P1469SCcTTcC15929AY.46.40.000165
ORF1ab/nsp31469P1469SCctTct53255325AY.1110.975275
ORF1ab/nsp31469P1469SCctTct50255025AY.70.984908
ORF1ab/nsp31469P1469SCctTct50015001AY.46.50.992262
ORF1ab/nsp31469P1469SCctTct45294529AY.29.10.998677
ORF1ab/nsp31469P1469SCctTct41284128AY.1140.95401
ORF1ab/nsp31469P1469SCctTct40144015AY.1100.452333
ORF1ab/nsp31469P1469SCcTTcC14015AY.1100.000113
ORF1ab/nsp31469P1469SCctTct36273627AY.930.990442
ORF1ab/nsp31469P1469SCctTct34193419AY.5.40.946043
ORF1ab/nsp31469P1469SCctTct33083309AY.410.972369
ORF1ab/nsp31469P1469SCcTTcC13309AY.410.000294
ORF1ab/nsp31469P1469SCctTct32923293AY.1160.944078
ORF1ab/nsp31469P1469SCcTTcC13293AY.1160.000287
ORF1ab/nsp31469P1469SCctTct30913091AY.920.887963
ORF1ab/nsp31469P1469SCctTct30393039AY.116.10.946434
ORF1ab/nsp31469P1469SCctTct29812981AY.120.10.956982
ORF1ab/nsp31469P1469SCctTct28232823AY.1060.945412
ORF1ab/nsp31469P1469SCctTct27312731AY.9.20.100309
ORF1ab/nsp31469P1469SCctTct26432643AY.5.30.8917
ORF1ab/nsp31469P1469SCctTct23962396AY.10.94816
ORF1ab/nsp31469P1469SCctTct23952395AY.23.10.999583
ORF1ab/nsp31469P1469SCctTct23832383AY.4.40.975041
ORF1ab/nsp31469P1469SCctTct23312331AY.120.736726
ORF1ab/nsp31469P1469SCctTct22422242AY.850.95771
ORF1ab/nsp31469P1469SCctTct22062206AY.940.976538
ORF1ab/nsp31469P1469SCctTct21342134AY.840.933508
ORF1ab/nsp31469P1469SCctTct19631963AY.120.2.10.978077
ORF1ab/nsp31469P1469SCctTct19421942AY.1010.952428
ORF1ab/nsp31469P1469SCctTct18881888AY.34.10.962774
ORF1ab/nsp31469P1469SCctTct18211821AY.1070.848555
ORF1ab/nsp31469P1469SCctTct17551755AY.320.934505
ORF1ab/nsp31469P1469SCctTct17371737AY.7.20.971477
ORF1ab/nsp31469P1469SCctTct16851685C.36.30.955757
ORF1ab/nsp31469P1469SCctTct14691469AY.46.20.933291
ORF1ab/nsp31469P1469SCctTct14261426AY.900.976044
ORF1ab/nsp31469P1469SCctTct14121412AY.1050.908039
ORF1ab/nsp31469P1469SCctTct13741374AY.39.1.10.995652
ORF1ab/nsp31469P1469SCctTct13381338AY.4.10.986726
ORF1ab/nsp31469P1469SCctTct12901290AY.1090.954142
ORF1ab/nsp31469P1469SCctTct12811281AY.910.93572
ORF1ab/nsp31469P1469SCctTct11891189AY.950.904871
ORF1ab/nsp31469P1469SCctTct11681168AY.4.30.983165
ORF1ab/nsp31469P1469SCctTct11571157AY.870.963364
ORF1ab/nsp31469P1469SCctTct11451145AY.860.950207
ORF1ab/nsp31469P1469SCctTct10771077AY.880.952255
ORF1ab/nsp31469P1469SCctTct10251025AY.46.30.957049
ORF1ab/nsp31469P1469SCctTct933933AY.46.10.957906
ORF1ab/nsp31469P1469SCctTct873873AY.990.916055
ORF1ab/nsp31469P1469SCctTct855855AY.800.965011
ORF1ab/nsp31469P1469SCctTct805807AY.790.974576
ORF1ab/nsp31469P1469SCcTTcC2807AY.790.002421
ORF1ab/nsp31469P1469SCctTct806806AY.770.908681
ORF1ab/nsp31469P1469SCctTct783783AY.470.024355
ORF1ab/nsp31469P1469SCctTct778778AY.750.043585
ORF1ab/nsp31469P1469SCctTct747747AY.1080.823594
ORF1ab/nsp31469P1469SCctTct684684AY.120.20.879177
ORF1ab/nsp31469P1469SCctTct666666AY.820.903664
ORF1ab/nsp31469P1469SCctTct647647AY.39.20.996918
ORF1ab/nsp31469P1469SCctTct630630AY.99.10.978261
ORF1ab/nsp31469P1469SCctTct608609AY.730.404524
ORF1ab/nsp31469P1469SCcTTcG1609AY.730.000665
ORF1ab/nsp31469P1469SCctTct607607AY.780.935285
ORF1ab/nsp31469P1469SCctTct563563AY.970.957483
ORF1ab/nsp31469P1469SCctTct548548AY.830.944828
ORF1ab/nsp31469P1469SCctTct515515C.360.469035
ORF1ab/nsp31469P1469SCctTct485485AY.1040.962302
ORF1ab/nsp31469P1469SCctTct465465AY.210.882353
ORF1ab/nsp31469P1469SCctTct461461AY.220.964435
ORF1ab/nsp31469P1469SCctTct461461AY.810.918327
ORF1ab/nsp31469P1469SCctTct449449AY.680.122913
ORF1ab/nsp31469P1469SCctTct445445AY.550.408257
ORF1ab/nsp31469P1469SCctTct422422AY.960.875519
ORF1ab/nsp31469P1469SCctTct397397AY.5.20.977833
ORF1ab/nsp31469P1469SCctTct370370AY.740.042789
ORF1ab/nsp31469P1469SCctTct360360B.10.003297
ORF1ab/nsp31469P1469SCctTct358358C.37.10.937173
ORF1ab/nsp31469P1469SCctTct331331AY.540.03156
ORF1ab/nsp31469P1469SCctTct323323C.36.3.10.877717
ORF1ab/nsp31469P1469SCctTct295295AY.260.008351
ORF1ab/nsp31469P1469SCctTct270270AY.190.307868
ORF1ab/nsp31469P1469SCctTct265265AY.5.10.996241
ORF1ab/nsp31469P1469SCctTct253253AY.580.229583
ORF1ab/nsp31469P1469SCctTct248248AY.590.131356
ORF1ab/nsp31469P1469SCctTct242242AY.75.10.043635
ORF1ab/nsp31469P1469SCctTct239239AY.91.10.971545
ORF1ab/nsp31469P1469SCctTct231231B.1.1.70.000207
ORF1ab/nsp31469P1469SCctTct222222AY.530.06383
ORF1ab/nsp31469P1469SCctTct209209P.70.912664
ORF1ab/nsp31469P1469SCctTct203203AY.760.980676
ORF1ab/nsp31469P1469SCctTct202202AY.890.990196
ORF1ab/nsp31469P1469SCctTct187187B.1.10.003392
ORF1ab/nsp31469P1469SCctTct182182AY.690.033974
ORF1ab/nsp31469P1469SCctTct159159AY.1150.828125
ORF1ab/nsp31469P1469SCctTct158158AY.640.094048
ORF1ab/nsp31469P1469SCctTct154154AY.100.081611
ORF1ab/nsp31469P1469SCctTct153153AY.620.066667
ORF1ab/nsp31469P1469SCctTct149149AY.370.047092
ORF1ab/nsp31469P1469SCctTct149149AY.670.069174
ORF1ab/nsp31469P1469SCctTct141141AY.520.114821
ORF1ab/nsp31469P1469SCctTct141141AY.560.226324
ORF1ab/nsp31469P1469SCctTct131131AY.160.049734
ORF1ab/nsp31469P1469SCctTct127127AY.630.04913
ORF1ab/nsp31469P1469SCctTct101101AY.570.066273
ORF1ab/nsp31469P1469SCctTct9999AY.140.008713
ORF1ab/nsp31469P1469SCctTct9595AY.130.015293
ORF1ab/nsp31469P1469SCctTct9494AY.400.090646
ORF1ab/nsp31469P1469SCctTct8585AY.380.042436
ORF1ab/nsp31469P1469SCctTct8282AY.480.03814
ORF1ab/nsp31469P1469SCctTct7777AY.350.017945
ORF1ab/nsp31469P1469SCctTct7373AY.710.034679
ORF1ab/nsp31469P1469SCctTct6161AY.600.057223
ORF1ab/nsp31469P1469SCctTct5454B.1.20.000475
ORF1ab/nsp31469P1469SCctTct5353AY.110.07095
ORF1ab/nsp31469P1469SCctTct5050AY.650.026652
ORF1ab/nsp31469P1469SCctTct5050AY.700.010425
ORF1ab/nsp31469P1469SCctTct3737B0.004729
ORF1ab/nsp31469P1469SCctTct3335P.10.00052
ORF1ab/nsp31469P1469SCcTTcC135P.10.000016
ORF1ab/nsp31469P1469SCcTTcA135P.10.000016
ORF1ab/nsp31469P1469SCctTct3334AY.500.026379
ORF1ab/nsp31469P1469SCcTTcC134AY.500.000799
ORF1ab/nsp31469P1469SCctTct3333AY.240.014224
ORF1ab/nsp31469P1469SCctTct3232AY.490.102236
ORF1ab/nsp31469P1469SCctTct3131B.1.3510.000922
ORF1ab/nsp31469P1469SCctTct3030AY.90.002028
ORF1ab/nsp31469P1469SCctTct2929AY.170.237705
ORF1ab/nsp31469P1469SCctTct2828AY.610.002934
ORF1ab/nsp31469P1469SCctTct2727B.1.177.870.019651
ORF1ab/nsp31469P1469SCctTct2323B.1.5960.002004
ORF1ab/nsp31469P1469SCctTct2222AY.510.02
ORF1ab/nsp31469P1469SCctTct2121AY.280.039698
ORF1ab/nsp31469P1469SCctTct2121AY.300.00831
ORF1ab/nsp31469P1469SCctTct1919B.1.1.700.00648
ORF1ab/nsp31469P1469SCctTct1717P.1.150.00395
ORF1ab/nsp31469P1469SCctTct1616AY.9.10.00134
ORF1ab/nsp31469P1469SCctTct1414AY.16.10.006579
ORF1ab/nsp31469P1469SCctTct1414AY.660.014973
ORF1ab/nsp31469P1469SCctTct1313A0.005031
ORF1ab/nsp31469P1469SCctTct1313AY.80.007879
ORF1ab/nsp31469P1469SCctTct1212B.1.6230.006438
ORF1ab/nsp31469P1469SCctTct1111AY.720.014966
ORF1ab/nsp31469P1469SCctTct1111B.1.3610.014175
ORF1ab/nsp31469P1469SCctTct1111B.1.617.10.001419
ORF1ab/nsp31469P1469SCctTct1111B.1.6210.000974
ORF1ab/nsp31469P1469SCctTct1111C.390.207547
ORF1ab/nsp31469P1469SCctTct1010B.1.1.2940.012658
ORF1ab/nsp31469P1469SCctTct99AY.270.000582
ORF1ab/nsp31469P1469SCctTct99B.1.3620.013867
ORF1ab/nsp31469P1469SCctTct99B.1.6280.003171
ORF1ab/nsp31469P1469SCctTct88B.1.1.1760.003515
ORF1ab/nsp31469P1469SCctTct88B.1.1.3720.00551
ORF1ab/nsp31469P1469SCctTct88B.1.1770.000105
ORF1ab/nsp31469P1469SCctTct88B.1.2400.001725
ORF1ab/nsp31469P1469SCctTct88R.10.00072
ORF1ab/nsp31469P1469SCctTct77B.1.1.10.002287
ORF1ab/nsp31469P1469SCctTct77B.1.1600.000218
ORF1ab/nsp31469P1469SCctTct66B.1.1.3760.035714
ORF1ab/nsp31469P1469SCctTct66P.1.170.000971
ORF1ab/nsp31469P1469SCctTct55B.1.1.2910.003712
ORF1ab/nsp31469P1469SCctTct55B.1.1640.074627
ORF1ab/nsp31469P1469SCctTct55B.1.2140.018315
ORF1ab/nsp31469P1469SCctTct55B.1.230.030303
ORF1ab/nsp31469P1469SCctTct55B.1.3820.044643
ORF1ab/nsp31469P1469SCctTct55B.1.4290.000118
ORF1ab/nsp31469P1469SCctTct55P.1.10.001588
ORF1ab/nsp31469P1469SCctTct440.222222
ORF1ab/nsp31469P1469SCctTct44AY.20.001425
ORF1ab/nsp31469P1469SCctTct44B.1.1.330.001684
ORF1ab/nsp31469P1469SCctTct44B.1.1.5260.014184
ORF1ab/nsp31469P1469SCctTct44B.1.177.730.002265
ORF1ab/nsp31469P1469SCctTct44B.1.36.190.037037
ORF1ab/nsp31469P1469SCctTct44B.1.3750.003279
ORF1ab/nsp31469P1469SCctTct44B.1.466.20.001565
ORF1ab/nsp31469P1469SCctTct44B.1.5260.000094
ORF1ab/nsp31469P1469SCctTct44P.1.120.001936
ORF1ab/nsp31469P1469SCctTct33B.1.1.2140.000166
ORF1ab/nsp31469P1469SCctTct33B.1.1.2220.000612
ORF1ab/nsp31469P1469SCctTct33B.1.1.280.000934
ORF1ab/nsp31469P1469SCctTct33B.1.1.5190.000119
ORF1ab/nsp31469P1469SCctTct33B.1.177.120.000455
ORF1ab/nsp31469P1469SCctTct33B.1.177.70.000495
ORF1ab/nsp31469P1469SCctTct33B.1.177.750.003122
ORF1ab/nsp31469P1469SCctTct33B.1.2580.0002
ORF1ab/nsp31469P1469SCctTct33B.1.3690.000856
ORF1ab/nsp31469P1469SCctTct33C.170.166667
ORF1ab/nsp31469P1469SCctTct33Q.30.000435
ORF1ab/nsp31469P1469SCctTct22AU.30.004219
ORF1ab/nsp31469P1469SCctTct22AY.150.004444
ORF1ab/nsp31469P1469SCctTct22B.1.1.1610.007067
ORF1ab/nsp31469P1469SCctTct22B.1.1.3060.000877
ORF1ab/nsp31469P1469SCctTct22B.1.1.5280.009615
ORF1ab/nsp31469P1469SCctTct22B.1.1.720.060606
ORF1ab/nsp31469P1469SCctTct22B.1.1430.042553
ORF1ab/nsp31469P1469SCctTct22B.1.160.260.004843
ORF1ab/nsp31469P1469SCctTct22B.1.177.860.000367
ORF1ab/nsp31469P1469SCctTct22B.1.3350.020619
ORF1ab/nsp31469P1469SCctTct22B.1.416.10.003125
ORF1ab/nsp31469P1469SCctTct22B.1.4740.003802
ORF1ab/nsp31469P1469SCctTct22B.1.5240.002813
ORF1ab/nsp31469P1469SCctTct22B.1.5540.008811
ORF1ab/nsp31469P1469SCctTct22B.1.5950.000522
ORF1ab/nsp31469P1469SCctTct22B.1.6300.010471
ORF1ab/nsp31469P1469SCctTct22B.1.6350.035088
ORF1ab/nsp31469P1469SCctTct22B.1.810.042553
ORF1ab/nsp31469P1469SCctTct22C.350.001548
ORF1ab/nsp31469P1469SCctTct22D.20.00015
ORF1ab/nsp31469P1469SCctTct22P.1.130.001797
ORF1ab/nsp31469P1469SCctTct22P.1.70.000639
ORF1ab/nsp31469P1469SCctTct22P.20.000373
ORF1ab/nsp31469P1469SCctTct11A.2.20.001689
ORF1ab/nsp31469P1469SCctTct11A.2.50.000499
ORF1ab/nsp31469P1469SCctTct11AY.180.010101
ORF1ab/nsp31469P1469SCctTct11AY.310.018519
ORF1ab/nsp31469P1469SCctTct11AZ.10.000867
ORF1ab/nsp31469P1469SCctTct11B.1.1.100.001115
ORF1ab/nsp31469P1469SCctTct11B.1.1.1810.004545
ORF1ab/nsp31469P1469SCctTct11B.1.1.2200.001859
ORF1ab/nsp31469P1469SCctTct11B.1.1.2540.011236
ORF1ab/nsp31469P1469SCctTct11B.1.1.260.005236
ORF1ab/nsp31469P1469SCctTct11B.1.1.3010.001179
ORF1ab/nsp31469P1469SCctTct11B.1.1.3110.000358
ORF1ab/nsp31469P1469SCctTct11B.1.1.3180.000302
ORF1ab/nsp31469P1469SCctTct11B.1.1.3480.000796
ORF1ab/nsp31469P1469SCctTct11B.1.1.4090.002833
ORF1ab/nsp31469P1469SCctTct11B.1.1.5120.028571
ORF1ab/nsp31469P1469SCctTct11B.1.1.5140.038462
ORF1ab/nsp31469P1469SCctTct11B.1.1.5180.006329
ORF1ab/nsp31469P1469SCctTct11B.1.1.5230.001563
ORF1ab/nsp31469P1469SCctTct11B.1.1.530.013699
ORF1ab/nsp31469P1469SCctTct11B.1.1.540.003021
ORF1ab/nsp31469P1469SCctTct11B.1.1420.002899
ORF1ab/nsp31469P1469SCctTct11B.1.160.160.000929
ORF1ab/nsp31469P1469SCctTct11B.1.1790.003759
ORF1ab/nsp31469P1469SCctTct11B.1.2180.005155
ORF1ab/nsp31469P1469SCctTct11B.1.2210.000071
ORF1ab/nsp31469P1469SCctTct11B.1.2410.000812
ORF1ab/nsp31469P1469SCctTct11B.1.2430.00007
ORF1ab/nsp31469P1469SCctTct11B.1.258.110.000396
ORF1ab/nsp31469P1469SCctTct11B.1.3010.005917
ORF1ab/nsp31469P1469SCctTct11B.1.3110.000275
ORF1ab/nsp31469P1469SCctTct11B.1.3400.004292
ORF1ab/nsp31469P1469SCctTct11B.1.3670.000792
ORF1ab/nsp31469P1469SCctTct11B.1.3800.006623
ORF1ab/nsp31469P1469SCctTct11B.1.3960.000706
ORF1ab/nsp31469P1469SCctTct11B.1.428.30.012821
ORF1ab/nsp31469P1469SCctTct11B.1.4320.011236
ORF1ab/nsp31469P1469SCctTct11B.1.4330.003195
ORF1ab/nsp31469P1469SCctTct11B.1.4360.001029
ORF1ab/nsp31469P1469SCctTct11B.1.4850.014925
ORF1ab/nsp31469P1469SCctTct11B.1.5210.004975
ORF1ab/nsp31469P1469SCctTct11B.1.5390.017544
ORF1ab/nsp31469P1469SCctTct11B.1.5640.000426
ORF1ab/nsp31469P1469SCctTct11B.1.5800.004065
ORF1ab/nsp31469P1469SCctTct11B.1.5820.000491
ORF1ab/nsp31469P1469SCctTct11B.1.6040.017241
ORF1ab/nsp31469P1469SCctTct11B.1.6090.000479
ORF1ab/nsp31469P1469SCctTct11B.1.6200.000946
ORF1ab/nsp31469P1469SCctTct11B.1.621.10.000506
ORF1ab/nsp31469P1469SCctTct11B.1.6310.003367
ORF1ab/nsp31469P1469SCctTct11B.1.6320.006711
ORF1ab/nsp31469P1469SCctTct11B.1.6370.000073
ORF1ab/nsp31469P1469SCctTct11B.550.00295
ORF1ab/nsp31469P1469SCctTct11C.140.004329
ORF1ab/nsp31469P1469SCctTct11C.320.023256
ORF1ab/nsp31469P1469SCctTct11P.1.140.000048
ORF1ab/nsp31469P1469SCctTct11Q.10.000126
ORF1ab/nsp31469P1469SCctTct11Q.70.001111

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.