CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P1442del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31442P1442delP2260deldelCCT---20420417043-7045

Details of the mutation P1442del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31442P1442delCCT---204204All0.000039
ORF1ab/nsp31442P1442delCCT---7979B.1.1.70.000071
ORF1ab/nsp31442P1442delCCT---1313B.1.1770.000171
ORF1ab/nsp31442P1442delCCT---1212AY.40.000019
ORF1ab/nsp31442P1442delCCT---88B.10.000073
ORF1ab/nsp31442P1442delCCT---66AY.4.50.000645
ORF1ab/nsp31442P1442delCCT---66AY.430.000027
ORF1ab/nsp31442P1442delCCT---55B.1.10.000091
ORF1ab/nsp31442P1442delCCT---33AY.250.000018
ORF1ab/nsp31442P1442delCCT---33B.1.2210.000213
ORF1ab/nsp31442P1442delCCT---33B.1.617.20.000011
ORF1ab/nsp31442P1442delCCT---220.111111
ORF1ab/nsp31442P1442delCCT---22AY.50.000041
ORF1ab/nsp31442P1442delCCT---22B.1.177.40.000422
ORF1ab/nsp31442P1442delCCT---22B.1.177.570.000562
ORF1ab/nsp31442P1442delCCT---22B.1.177.70.00033
ORF1ab/nsp31442P1442delCCT---22B.1.177.870.001456
ORF1ab/nsp31442P1442delCCT---22B.1.5250.000226
ORF1ab/nsp31442P1442delCCT---22P.10.000032
ORF1ab/nsp31442P1442delCCT---22U.30.007722
ORF1ab/nsp31442P1442delCCT---11A0.000387
ORF1ab/nsp31442P1442delCCT---11A.280.002646
ORF1ab/nsp31442P1442delCCT---11AY.1030.000006
ORF1ab/nsp31442P1442delCCT---11AY.1190.000035
ORF1ab/nsp31442P1442delCCT---11AY.1200.000037
ORF1ab/nsp31442P1442delCCT---11AY.190.00114
ORF1ab/nsp31442P1442delCCT---11AY.360.000148
ORF1ab/nsp31442P1442delCCT---11AY.420.00004
ORF1ab/nsp31442P1442delCCT---11AY.5.30.000337
ORF1ab/nsp31442P1442delCCT---11AY.60.000041
ORF1ab/nsp31442P1442delCCT---11AY.600.000938
ORF1ab/nsp31442P1442delCCT---11AY.70.000196
ORF1ab/nsp31442P1442delCCT---11AY.7.20.000559
ORF1ab/nsp31442P1442delCCT---11AY.720.001361
ORF1ab/nsp31442P1442delCCT---11AY.9.20.000037
ORF1ab/nsp31442P1442delCCT---11AY.98.10.000048
ORF1ab/nsp31442P1442delCCT---11AY.99.10.001553
ORF1ab/nsp31442P1442delCCT---11B0.000128
ORF1ab/nsp31442P1442delCCT---11B.1.1.2210.010101
ORF1ab/nsp31442P1442delCCT---11B.1.1.2360.006897
ORF1ab/nsp31442P1442delCCT---11B.1.1.510.001718
ORF1ab/nsp31442P1442delCCT---11B.1.1.700.000341
ORF1ab/nsp31442P1442delCCT---11B.1.1600.000031
ORF1ab/nsp31442P1442delCCT---11B.1.160.70.002079
ORF1ab/nsp31442P1442delCCT---11B.1.177.150.000631
ORF1ab/nsp31442P1442delCCT---11B.1.177.160.000664
ORF1ab/nsp31442P1442delCCT---11B.1.177.190.001431
ORF1ab/nsp31442P1442delCCT---11B.1.177.210.000076
ORF1ab/nsp31442P1442delCCT---11B.1.177.60.000977
ORF1ab/nsp31442P1442delCCT---11B.1.177.620.001192
ORF1ab/nsp31442P1442delCCT---11B.1.177.680.015152
ORF1ab/nsp31442P1442delCCT---11B.1.177.760.002494
ORF1ab/nsp31442P1442delCCT---11B.1.177.830.001481
ORF1ab/nsp31442P1442delCCT---11B.1.177.90.001332
ORF1ab/nsp31442P1442delCCT---11B.1.258.100.011364
ORF1ab/nsp31442P1442delCCT---11B.1.36.170.000494
ORF1ab/nsp31442P1442delCCT---11B.1.36.380.001642
ORF1ab/nsp31442P1442delCCT---11B.1.4150.014286
ORF1ab/nsp31442P1442delCCT---11B.1.416.10.001563
ORF1ab/nsp31442P1442delCCT---11B.1.5960.000087
ORF1ab/nsp31442P1442delCCT---11B.1.6210.000089
ORF1ab/nsp31442P1442delCCT---11B.1.6300.005236
ORF1ab/nsp31442P1442delCCT---11B.340.013699
ORF1ab/nsp31442P1442delCCT---11C.360.000911
ORF1ab/nsp31442P1442delCCT---11P.1.10.000318
ORF1ab/nsp31442P1442delCCT---11P.1.150.000232
ORF1ab/nsp31442P1442delCCT---11Q.20.000613
ORF1ab/nsp31442P1442delCCT---11R.20.014493