CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P1442L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31442P1442LP2260LnonsyncCtcTt127912750.9968737043-7045
ORF1ab/nsp31442P1442LP2260LnonsyncCTcTC127940.003127447043-7045

Details of the mutation P1442L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31442P1442LcCtcTt12751279All0.000244
ORF1ab/nsp31442P1442LcCTcTC41279All0.000001
ORF1ab/nsp31442P1442LcCtcTt737738B.1.177.580.981358
ORF1ab/nsp31442P1442LcCTcTC1738B.1.177.580.001332
ORF1ab/nsp31442P1442LcCtcTt104104B.1.1.70.000093
ORF1ab/nsp31442P1442LcCtcTt9191B.1.20.000801
ORF1ab/nsp31442P1442LcCtcTt5959AY.1030.000366
ORF1ab/nsp31442P1442LcCtcTt3737C.36.30.020987
ORF1ab/nsp31442P1442LcCtcTt3333B.1.4290.000776
ORF1ab/nsp31442P1442LcCtcTt2323AY.40.000036
ORF1ab/nsp31442P1442LcCtcTt1818B.1.617.20.000068
ORF1ab/nsp31442P1442LcCtcTt1616AY.330.001068
ORF1ab/nsp31442P1442LcCtcTt1516B.10.000137
ORF1ab/nsp31442P1442LcCTcTC116B.10.000009
ORF1ab/nsp31442P1442LcCtcTt1313B.1.1770.000171
ORF1ab/nsp31442P1442LcCtcTt1010AY.46.40.001645
ORF1ab/nsp31442P1442LcCtcTt99AY.1020.000239
ORF1ab/nsp31442P1442LcCtcTt99AY.30.00009
ORF1ab/nsp31442P1442LcCtcTt66AY.250.000036
ORF1ab/nsp31442P1442LcCtcTt66AY.290.000095
ORF1ab/nsp31442P1442LcCtcTt55AY.340.000485
ORF1ab/nsp31442P1442LcCtcTt55AY.39.10.000198
ORF1ab/nsp31442P1442LcCtcTt55AY.430.000022
ORF1ab/nsp31442P1442LcCtcTt55B.1.177.810.000947
ORF1ab/nsp31442P1442LcCtcTt55B.1.5960.000436
ORF1ab/nsp31442P1442LcCtcTt44B.1.10.000073
ORF1ab/nsp31442P1442LcCtcTt44B.1.1.2070.004728
ORF1ab/nsp31442P1442LcCtcTt44P.10.000063
ORF1ab/nsp31442P1442LcCtcTt230.111111
ORF1ab/nsp31442P1442LcCTcTC130.055556
ORF1ab/nsp31442P1442LcCtcTt33AY.440.000018
ORF1ab/nsp31442P1442LcCtcTt33B.1.1.540.009063
ORF1ab/nsp31442P1442LcCtcTt33B.1.36.10.003421
ORF1ab/nsp31442P1442LcCtcTt33B.1.4270.000151
ORF1ab/nsp31442P1442LcCtcTt22AY.420.00008
ORF1ab/nsp31442P1442LcCtcTt22AY.520.001629
ORF1ab/nsp31442P1442LcCtcTt22B.1.1.2140.000111
ORF1ab/nsp31442P1442LcCtcTt22B.1.1.3010.002358
ORF1ab/nsp31442P1442LcCtcTt22B.1.1.3350.025974
ORF1ab/nsp31442P1442LcCtcTt22B.1.3610.002577
ORF1ab/nsp31442P1442LcCtcTt11AY.1080.001103
ORF1ab/nsp31442P1442LcCtcTt11AY.1180.000063
ORF1ab/nsp31442P1442LcCtcTt11AY.200.000039
ORF1ab/nsp31442P1442LcCtcTt11AY.260.000028
ORF1ab/nsp31442P1442LcCtcTt11AY.34.10.00051
ORF1ab/nsp31442P1442LcCtcTt11AY.450.000122
ORF1ab/nsp31442P1442LcCtcTt11AY.470.000031
ORF1ab/nsp31442P1442LcCtcTt11AY.60.000041
ORF1ab/nsp31442P1442LcCtcTt11AY.740.000116
ORF1ab/nsp31442P1442LcCtcTt11AY.790.001211
ORF1ab/nsp31442P1442LcCtcTt11AY.9.20.000037
ORF1ab/nsp31442P1442LcCtcTt11B.1.1.2220.000204
ORF1ab/nsp31442P1442LcCtcTt11B.1.1.3680.003086
ORF1ab/nsp31442P1442LcCtcTt11B.1.1.5070.008696
ORF1ab/nsp31442P1442LcCtcTt11B.1.1.5190.00004
ORF1ab/nsp31442P1442LcCtcTt11B.1.1600.000031
ORF1ab/nsp31442P1442LcCtcTt11B.1.177.540.000606
ORF1ab/nsp31442P1442LcCtcTt11B.1.2210.000071
ORF1ab/nsp31442P1442LcCtcTt11B.1.2390.001221
ORF1ab/nsp31442P1442LcCtcTt11B.1.258.170.000104
ORF1ab/nsp31442P1442LcCtcTt11B.1.3560.001727
ORF1ab/nsp31442P1442LcCtcTt11B.1.3750.00082
ORF1ab/nsp31442P1442LcCTcTC11B.1.3770.004566
ORF1ab/nsp31442P1442LcCtcTt11B.1.438.10.000107
ORF1ab/nsp31442P1442LcCtcTt11B.1.6120.002653
ORF1ab/nsp31442P1442LcCtcTt11B.1.6370.000073
ORF1ab/nsp31442P1442LcCtcTt11Q.10.000126