CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P1403del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31403P1403delP2221deldelCCT---21321316926-6928

Details of the mutation P1403del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31403P1403delCCT---213213All0.000041
ORF1ab/nsp31403P1403delCCT---6464B.1.1.70.000057
ORF1ab/nsp31403P1403delCCT---1717AY.40.000026
ORF1ab/nsp31403P1403delCCT---1414B.1.1770.000184
ORF1ab/nsp31403P1403delCCT---1313B.10.000119
ORF1ab/nsp31403P1403delCCT---1010B.1.20.000088
ORF1ab/nsp31403P1403delCCT---99B.1.10.000163
ORF1ab/nsp31403P1403delCCT---660.333333
ORF1ab/nsp31403P1403delCCT---55AY.430.000022
ORF1ab/nsp31403P1403delCCT---44B.1.2210.000284
ORF1ab/nsp31403P1403delCCT---44B.1.617.20.000015
ORF1ab/nsp31403P1403delCCT---33AY.4.50.000322
ORF1ab/nsp31403P1403delCCT---33B.1.5960.000261
ORF1ab/nsp31403P1403delCCT---22B.1.177.40.000422
ORF1ab/nsp31403P1403delCCT---22B.1.2580.000133
ORF1ab/nsp31403P1403delCCT---22B.1.3110.000549
ORF1ab/nsp31403P1403delCCT---22B.1.3510.000059
ORF1ab/nsp31403P1403delCCT---22B.1.5170.000854
ORF1ab/nsp31403P1403delCCT---22B.1.5250.000226
ORF1ab/nsp31403P1403delCCT---22P.10.000032
ORF1ab/nsp31403P1403delCCT---11A.2.40.003367
ORF1ab/nsp31403P1403delCCT---11A.280.002646
ORF1ab/nsp31403P1403delCCT---11AY.1200.000037
ORF1ab/nsp31403P1403delCCT---11AY.240.000431
ORF1ab/nsp31403P1403delCCT---11AY.360.000148
ORF1ab/nsp31403P1403delCCT---11AY.470.000031
ORF1ab/nsp31403P1403delCCT---11AY.50.000021
ORF1ab/nsp31403P1403delCCT---11AY.540.000095
ORF1ab/nsp31403P1403delCCT---11AY.610.000105
ORF1ab/nsp31403P1403delCCT---11AY.730.000665
ORF1ab/nsp31403P1403delCCT---11AY.9.20.000037
ORF1ab/nsp31403P1403delCCT---11B.1.1.1920.002309
ORF1ab/nsp31403P1403delCCT---11B.1.1.2180.007692
ORF1ab/nsp31403P1403delCCT---11B.1.1.2360.006897
ORF1ab/nsp31403P1403delCCT---11B.1.1.3110.000358
ORF1ab/nsp31403P1403delCCT---11B.1.1.3120.001912
ORF1ab/nsp31403P1403delCCT---11B.1.1.3150.008475
ORF1ab/nsp31403P1403delCCT---11B.1.1.4090.002833
ORF1ab/nsp31403P1403delCCT---11B.1.1.700.000341
ORF1ab/nsp31403P1403delCCT---11B.1.160.70.002079
ORF1ab/nsp31403P1403delCCT---11B.1.177.150.000631
ORF1ab/nsp31403P1403delCCT---11B.1.177.160.000664
ORF1ab/nsp31403P1403delCCT---11B.1.177.180.00116
ORF1ab/nsp31403P1403delCCT---11B.1.177.190.001431
ORF1ab/nsp31403P1403delCCT---11B.1.177.210.000076
ORF1ab/nsp31403P1403delCCT---11B.1.177.540.000606
ORF1ab/nsp31403P1403delCCT---11B.1.177.560.000668
ORF1ab/nsp31403P1403delCCT---11B.1.177.570.000281
ORF1ab/nsp31403P1403delCCT---11B.1.177.60.000977
ORF1ab/nsp31403P1403delCCT---11B.1.177.620.001192
ORF1ab/nsp31403P1403delCCT---11B.1.177.680.015152
ORF1ab/nsp31403P1403delCCT---11B.1.177.70.000165
ORF1ab/nsp31403P1403delCCT---11B.1.177.870.000728
ORF1ab/nsp31403P1403delCCT---11B.1.177.90.001332
ORF1ab/nsp31403P1403delCCT---11B.1.258.100.011364
ORF1ab/nsp31403P1403delCCT---11B.1.36.220.001208
ORF1ab/nsp31403P1403delCCT---11B.1.3890.001002
ORF1ab/nsp31403P1403delCCT---11B.1.4090.000781
ORF1ab/nsp31403P1403delCCT---11B.1.416.10.001563
ORF1ab/nsp31403P1403delCCT---11B.1.5750.000303
ORF1ab/nsp31403P1403delCCT---11B.1.6210.000089
ORF1ab/nsp31403P1403delCCT---11B.1.621.10.000506
ORF1ab/nsp31403P1403delCCT---11B.1.6300.005236
ORF1ab/nsp31403P1403delCCT---11B.1.6370.000073
ORF1ab/nsp31403P1403delCCT---11B.400.000364
ORF1ab/nsp31403P1403delCCT---11P.1.150.000232
ORF1ab/nsp31403P1403delCCT---11U.30.003861