CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P1403S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31403P1403SP2221SnonsynCctTct343034290.9997086926-6928
ORF1ab/nsp31403P1403SP2221SnonsynCcTTcC343010.0002915456926-6928

Details of the mutation P1403S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31403P1403SCctTct34293430All0.000656
ORF1ab/nsp31403P1403SCcTTcC13430All0
ORF1ab/nsp31403P1403SCctTct694694AY.50.014331
ORF1ab/nsp31403P1403SCctTct524524L.10.998095
ORF1ab/nsp31403P1403SCctTct400400B.1.1.70.000358
ORF1ab/nsp31403P1403SCctTct339339B.1.20.002985
ORF1ab/nsp31403P1403SCctTct252252AY.40.000392
ORF1ab/nsp31403P1403SCctTct214214B.1.617.20.000806
ORF1ab/nsp31403P1403SCctTct7171B.10.00065
ORF1ab/nsp31403P1403SCctTct6262AY.1030.000385
ORF1ab/nsp31403P1403SCctTct5858AY.440.000353
ORF1ab/nsp31403P1403SCctTct4546AY.430.000199
ORF1ab/nsp31403P1403SCcTTcC146AY.430.000004
ORF1ab/nsp31403P1403SCctTct4545B.1.6210.003983
ORF1ab/nsp31403P1403SCctTct4343B.1.10.00078
ORF1ab/nsp31403P1403SCctTct3838P.10.000599
ORF1ab/nsp31403P1403SCctTct3535B.1.258.220.093333
ORF1ab/nsp31403P1403SCctTct3333B.1.2340.004354
ORF1ab/nsp31403P1403SCctTct3030B.1.1.5190.001191
ORF1ab/nsp31403P1403SCctTct2828B.1.1.100.031215
ORF1ab/nsp31403P1403SCctTct2020B.1.1770.000263
ORF1ab/nsp31403P1403SCctTct2020C.36.30.011344
ORF1ab/nsp31403P1403SCctTct2020R.10.0018
ORF1ab/nsp31403P1403SCctTct1616AY.1020.000424
ORF1ab/nsp31403P1403SCctTct1616AY.160.006074
ORF1ab/nsp31403P1403SCctTct1616B.1.1.2160.014248
ORF1ab/nsp31403P1403SCctTct1616B.1.177.810.003029
ORF1ab/nsp31403P1403SCctTct1414AY.30.000139
ORF1ab/nsp31403P1403SCctTct1414B.1.1600.000437
ORF1ab/nsp31403P1403SCctTct1212AY.290.000189
ORF1ab/nsp31403P1403SCctTct1212AY.4.20.00026
ORF1ab/nsp31403P1403SCctTct1111B.1.3510.000327
ORF1ab/nsp31403P1403SCctTct1111C.360.010018
ORF1ab/nsp31403P1403SCctTct1010AY.230.000697
ORF1ab/nsp31403P1403SCctTct1010AY.250.00006
ORF1ab/nsp31403P1403SCctTct1010B.1.1.3180.003018
ORF1ab/nsp31403P1403SCctTct1010B.1.2430.000696
ORF1ab/nsp31403P1403SCctTct99B.1.360.001313
ORF1ab/nsp31403P1403SCctTct88AY.270.000518
ORF1ab/nsp31403P1403SCctTct88AY.330.000534
ORF1ab/nsp31403P1403SCctTct88AY.390.000198
ORF1ab/nsp31403P1403SCctTct88B.1.4290.000188
ORF1ab/nsp31403P1403SCctTct77B.1.258.170.000728
ORF1ab/nsp31403P1403SCctTct77Q.80.001154
ORF1ab/nsp31403P1403SCctTct66AY.1000.000276
ORF1ab/nsp31403P1403SCctTct66AY.3.10.000512
ORF1ab/nsp31403P1403SCctTct66AY.360.000889
ORF1ab/nsp31403P1403SCctTct66B.1.1.250.003411
ORF1ab/nsp31403P1403SCctTct55AY.1180.000313
ORF1ab/nsp31403P1403SCctTct55AY.470.000156
ORF1ab/nsp31403P1403SCctTct55B.1.5410.022124
ORF1ab/nsp31403P1403SCctTct55B.1.5750.001517
ORF1ab/nsp31403P1403SCctTct44AY.60.000165
ORF1ab/nsp31403P1403SCctTct44AY.75.10.000721
ORF1ab/nsp31403P1403SCctTct44AY.9.20.000147
ORF1ab/nsp31403P1403SCctTct44B.1.1.280.001245
ORF1ab/nsp31403P1403SCctTct44B.1.351.20.00121
ORF1ab/nsp31403P1403SCctTct44B.1.5240.005626
ORF1ab/nsp31403P1403SCctTct33A.23.10.002113
ORF1ab/nsp31403P1403SCctTct33AY.130.000483
ORF1ab/nsp31403P1403SCctTct33AY.340.000291
ORF1ab/nsp31403P1403SCctTct33AY.4.2.10.000447
ORF1ab/nsp31403P1403SCctTct33AY.420.000121
ORF1ab/nsp31403P1403SCctTct33AY.980.000237
ORF1ab/nsp31403P1403SCctTct33B.1.1.3060.001315
ORF1ab/nsp31403P1403SCctTct33B.1.1.3110.001074
ORF1ab/nsp31403P1403SCctTct33B.1.177.120.000455
ORF1ab/nsp31403P1403SCctTct33B.1.4270.000151
ORF1ab/nsp31403P1403SCctTct33B.1.5170.001281
ORF1ab/nsp31403P1403SCctTct33B.1.5260.000071
ORF1ab/nsp31403P1403SCctTct33B.1.5960.000261
ORF1ab/nsp31403P1403SCctTct33C.370.000348
ORF1ab/nsp31403P1403SCctTct22AY.1100.000225
ORF1ab/nsp31403P1403SCctTct22AY.1210.000271
ORF1ab/nsp31403P1403SCctTct22AY.260.000057
ORF1ab/nsp31403P1403SCctTct22AY.46.60.000144
ORF1ab/nsp31403P1403SCctTct22AY.750.000112
ORF1ab/nsp31403P1403SCctTct22AY.850.000854
ORF1ab/nsp31403P1403SCctTct22AY.880.001768
ORF1ab/nsp31403P1403SCctTct22AY.920.000575
ORF1ab/nsp31403P1403SCctTct22AY.950.001522
ORF1ab/nsp31403P1403SCctTct22AY.98.10.000097
ORF1ab/nsp31403P1403SCctTct22B.1.1.1490.032787
ORF1ab/nsp31403P1403SCctTct22B.1.1.1610.007067
ORF1ab/nsp31403P1403SCctTct22B.1.1.2770.001517
ORF1ab/nsp31403P1403SCctTct22B.1.1.3560.017094
ORF1ab/nsp31403P1403SCctTct22B.1.177.320.002699
ORF1ab/nsp31403P1403SCctTct22B.1.177.540.001213
ORF1ab/nsp31403P1403SCctTct22B.1.177.860.000367
ORF1ab/nsp31403P1403SCctTct22B.1.2210.000142
ORF1ab/nsp31403P1403SCctTct22B.1.2580.000133
ORF1ab/nsp31403P1403SCctTct22B.1.36.290.001035
ORF1ab/nsp31403P1403SCctTct22B.1.3620.003082
ORF1ab/nsp31403P1403SCctTct22B.1.3670.001585
ORF1ab/nsp31403P1403SCctTct22B.1.5640.000852
ORF1ab/nsp31403P1403SCctTct22B.1.617.10.000258
ORF1ab/nsp31403P1403SCctTct22C.140.008658
ORF1ab/nsp31403P1403SCctTct22C.160.002121
ORF1ab/nsp31403P1403SCctTct22P.1.40.001953
ORF1ab/nsp31403P1403SCctTct11A0.000387
ORF1ab/nsp31403P1403SCctTct11AE.80.000489
ORF1ab/nsp31403P1403SCctTct11AY.1040.001984
ORF1ab/nsp31403P1403SCctTct11AY.1150.005208
ORF1ab/nsp31403P1403SCctTct11AY.1170.000085
ORF1ab/nsp31403P1403SCctTct11AY.23.10.000417
ORF1ab/nsp31403P1403SCctTct11AY.240.000431
ORF1ab/nsp31403P1403SCctTct11AY.29.10.000221
ORF1ab/nsp31403P1403SCctTct11AY.34.10.00051
ORF1ab/nsp31403P1403SCctTct11AY.39.10.00004
ORF1ab/nsp31403P1403SCctTct11AY.450.000122
ORF1ab/nsp31403P1403SCctTct11AY.46.20.000635
ORF1ab/nsp31403P1403SCctTct11AY.46.40.000165
ORF1ab/nsp31403P1403SCctTct11AY.5.30.000337
ORF1ab/nsp31403P1403SCctTct11AY.5.40.000277
ORF1ab/nsp31403P1403SCctTct11AY.510.000909
ORF1ab/nsp31403P1403SCctTct11AY.550.000917
ORF1ab/nsp31403P1403SCctTct11AY.580.000907
ORF1ab/nsp31403P1403SCctTct11AY.590.00053
ORF1ab/nsp31403P1403SCctTct11AY.610.000105
ORF1ab/nsp31403P1403SCctTct11AY.620.000436
ORF1ab/nsp31403P1403SCctTct11AY.670.000464
ORF1ab/nsp31403P1403SCctTct11AY.840.000437
ORF1ab/nsp31403P1403SCctTct11AY.960.002075
ORF1ab/nsp31403P1403SCctTct11AY.99.20.000092
ORF1ab/nsp31403P1403SCctTct11B.1.1.1630.007634
ORF1ab/nsp31403P1403SCctTct11B.1.1.1760.000439
ORF1ab/nsp31403P1403SCctTct11B.1.1.2220.000204
ORF1ab/nsp31403P1403SCctTct11B.1.1.2360.006897
ORF1ab/nsp31403P1403SCctTct11B.1.1.2530.002506
ORF1ab/nsp31403P1403SCctTct11B.1.1.3120.001912
ORF1ab/nsp31403P1403SCctTct11B.1.1.4090.002833
ORF1ab/nsp31403P1403SCctTct11B.1.1.4320.001266
ORF1ab/nsp31403P1403SCctTct11B.1.1.4480.002033
ORF1ab/nsp31403P1403SCctTct11B.1.1.570.011494
ORF1ab/nsp31403P1403SCctTct11B.1.1.700.000341
ORF1ab/nsp31403P1403SCctTct11B.1.110.30.000718
ORF1ab/nsp31403P1403SCctTct11B.1.160.160.000929
ORF1ab/nsp31403P1403SCctTct11B.1.160.220.006757
ORF1ab/nsp31403P1403SCctTct11B.1.177.440.000519
ORF1ab/nsp31403P1403SCctTct11B.1.177.600.000218
ORF1ab/nsp31403P1403SCctTct11B.1.177.70.000165
ORF1ab/nsp31403P1403SCctTct11B.1.177.770.000726
ORF1ab/nsp31403P1403SCctTct11B.1.177.820.000477
ORF1ab/nsp31403P1403SCctTct11B.1.2220.001692
ORF1ab/nsp31403P1403SCctTct11B.1.2410.000812
ORF1ab/nsp31403P1403SCctTct11B.1.351.50.0006
ORF1ab/nsp31403P1403SCctTct11B.1.36.180.00042
ORF1ab/nsp31403P1403SCctTct11B.1.4410.009615
ORF1ab/nsp31403P1403SCctTct11B.1.466.20.000391
ORF1ab/nsp31403P1403SCctTct11B.1.5250.000113
ORF1ab/nsp31403P1403SCctTct11B.1.5380.008065
ORF1ab/nsp31403P1403SCctTct11B.1.5770.000687
ORF1ab/nsp31403P1403SCctTct11B.1.6090.000479
ORF1ab/nsp31403P1403SCctTct11D.20.000075
ORF1ab/nsp31403P1403SCctTct11P.1.10.000318
ORF1ab/nsp31403P1403SCctTct11P.1.140.000048
ORF1ab/nsp31403P1403SCctTct11P.1.150.000232
ORF1ab/nsp31403P1403SCctTct11P.20.000187
ORF1ab/nsp31403P1403SCctTct11P.60.003145
ORF1ab/nsp31403P1403SCctTct11Q.10.000126