CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 1261 | P1261S | P2079S | nonsyn | Cca | Tca | 4170 | 4168 | 0.99952 | 6500-6502 |
ORF1ab/nsp3 | 1261 | P1261S | P2079S | nonsyn | CcA | TcG | 4170 | 1 | 0.000239808 | 6500-6502 |
ORF1ab/nsp3 | 1261 | P1261S | P2079S | nonsyn | CcA | TcT | 4170 | 1 | 0.000239808 | 6500-6502 |
Details of the mutation P1261S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 4168 | 4170 | All | 0.000797 |
ORF1ab/nsp3 | 1261 | P1261S | CcA | TcG | 1 | 4170 | All | 0 |
ORF1ab/nsp3 | 1261 | P1261S | CcA | TcT | 1 | 4170 | All | 0 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 412 | 412 | AY.25 | 0.002478 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 402 | 402 | B.1.617.2 | 0.001514 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 341 | 341 | B.1.1.7 | 0.000305 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 324 | 325 | AY.43 | 0.001435 |
ORF1ab/nsp3 | 1261 | P1261S | CcA | TcG | 1 | 325 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 283 | 283 | AY.4 | 0.00044 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 240 | 240 | B.1.438.1 | 0.025743 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 201 | 201 | B.1.448 | 0.527559 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 169 | 169 | B.1.2 | 0.001488 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 167 | 167 | AY.74 | 0.019313 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 162 | 163 | B.1 | 0.001484 |
ORF1ab/nsp3 | 1261 | P1261S | CcA | TcT | 1 | 163 | B.1 | 0.000009 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 98 | 98 | B.1.243 | 0.006819 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 84 | 84 | B.1.526 | 0.001974 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 71 | 71 | AY.102 | 0.001882 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 51 | 51 | P.1 | 0.000803 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 50 | 50 | B.1.427 | 0.002525 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 49 | 49 | B.1.1.519 | 0.001946 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 47 | 47 | AY.10 | 0.024907 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 46 | 46 | B.1.177 | 0.000606 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 44 | 44 | AY.103 | 0.000273 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 44 | 44 | AY.44 | 0.000268 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 40 | 40 | AY.34 | 0.003879 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 39 | 39 | B.1.1.394 | 0.95122 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 38 | 38 | B.1.401 | 0.311475 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 31 | 31 | AY.29 | 0.000489 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 30 | 30 | AY.49 | 0.095847 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 29 | 29 | AY.3 | 0.000288 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 24 | 24 | AY.23 | 0.001674 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 24 | 24 | B.1.596 | 0.002091 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 22 | 22 | B.1.609 | 0.010547 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 20 | 20 | B.1.1 | 0.000363 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 18 | 18 | AY.39 | 0.000445 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 18 | 18 | AY.47 | 0.00056 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 18 | 18 | R.1 | 0.00162 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 17 | 17 | B.1.1.176 | 0.007469 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 16 | 16 | B.1.422 | 0.012998 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 15 | 15 | B.1.311 | 0.004119 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 15 | 15 | B.1.637 | 0.001096 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 14 | 14 | AY.5 | 0.000289 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 13 | 13 | AY.14 | 0.001144 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 13 | 13 | AY.20 | 0.000505 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 12 | 12 | AY.100 | 0.000552 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 12 | 12 | AY.61 | 0.001257 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 12 | 12 | B.1.240 | 0.002587 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 11 | 11 | AY.118 | 0.000689 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 11 | 11 | B.1.351 | 0.000327 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 11 | 11 | B.1.36 | 0.001605 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 10 | 10 | AY.4.2 | 0.000217 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 10 | 10 | P.1.15 | 0.002323 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 9 | 9 | AY.46 | 0.000937 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 9 | 9 | B.1.582 | 0.004416 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 8 | 8 | B.1.369 | 0.002282 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 7 | 7 | AY.117 | 0.000592 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 7 | 7 | AY.120 | 0.00026 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 7 | 7 | AY.26 | 0.000198 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 7 | 7 | AY.75 | 0.000392 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 7 | 7 | B.1.1.372 | 0.004821 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 7 | 7 | B.1.177.9 | 0.009321 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 7 | 7 | B.1.429 | 0.000165 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 6 | 6 | AY.113 | 0.000854 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 6 | 6 | B.1.621 | 0.000531 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 6 | 6 | P.1.7 | 0.001916 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 5 | 5 | A.19 | 0.04717 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 5 | 5 | B.1.1.63 | 0.001929 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 5 | 5 | P.1.14 | 0.000239 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 4 | 4 | AY.36 | 0.000593 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 4 | 4 | AY.39.1 | 0.000158 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 4 | 4 | AY.4.5 | 0.00043 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 4 | 4 | AY.45 | 0.000487 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 4 | 4 | AY.53 | 0.00115 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 4 | 4 | AY.99.2 | 0.000369 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 4 | 4 | B.1.1.153 | 0.004381 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 4 | 4 | B.1.214.3 | 0.028571 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 4 | 4 | B.1.36.29 | 0.002069 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 4 | 4 | B.1.525 | 0.000453 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 4 | 4 | B.1.595 | 0.001044 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 4 | 4 | P.2 | 0.000747 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 4 | 4 | Q.1 | 0.000505 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | A.2.5 | 0.001497 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | AE.8 | 0.001467 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | AY.119 | 0.000106 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | AY.27 | 0.000194 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | AY.3.1 | 0.000256 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | AY.4.2.1 | 0.000447 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | AY.42 | 0.000121 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | AY.46.4 | 0.000494 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | AY.5.3 | 0.001012 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | AY.87 | 0.002498 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | AY.9 | 0.000203 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | AY.98.1 | 0.000145 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | B.1.1.141 | 0.006036 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | B.1.1.37 | 0.000579 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | B.1.160 | 0.000094 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | B.1.258 | 0.0002 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | B.1.404 | 0.003906 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | B.1.468 | 0.017143 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | B.1.517 | 0.001281 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | B.40 | 0.001093 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | A.21 | 0.00554 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | AY.106 | 0.00067 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | AY.62 | 0.000871 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | B.1.1.1 | 0.000653 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | B.1.1.214 | 0.000111 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | B.1.1.284 | 0.000215 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | B.1.1.286 | 0.005797 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | B.1.1.409 | 0.005666 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | B.1.177.21 | 0.000153 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | B.1.319 | 0.006098 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | B.1.356 | 0.003454 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | B.1.36.18 | 0.00084 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | B.1.561 | 0.000794 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | B.1.619.1 | 0.001283 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | B.1.628 | 0.000705 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 2 | 2 | P.1.10 | 0.000539 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.50 | 0.000799 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.1.142 | 0.017544 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.1.243 | 0.004082 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.1.265 | 0.003155 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.1.397 | 0.002252 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.1.420 | 0.001006 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.1.44 | 0.00241 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.126 | 0.001276 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.160.32 | 0.004292 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.177.55 | 0.002331 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.177.77 | 0.000726 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.210 | 0.002132 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.233 | 0.014085 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.268 | 0.010417 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.280 | 0.007143 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.320 | 0.001245 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.325 | 0.006897 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.36.26 | 0.002857 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.36.38 | 0.001642 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.36.39 | 0.002217 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.400.1 | 0.015152 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.411 | 0.003704 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.424 | 0.008065 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.441 | 0.009615 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.548 | 0.035714 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.610 | 0.003546 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | C.4 | 0.01 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp3 | 1261 | P1261S | Cca | Tca | 1 | 1 | P.1.17 | 0.000162 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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