CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P1228del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31228P1228delP2046deldelCCA---929216401-6403

Details of the mutation P1228del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31228P1228delCCA---9292All0.000018
ORF1ab/nsp31228P1228delCCA---1616B.1.617.20.00006
ORF1ab/nsp31228P1228delCCA---1313AY.1000.000598
ORF1ab/nsp31228P1228delCCA---1010AY.440.000061
ORF1ab/nsp31228P1228delCCA---88B.1.1.70.000007
ORF1ab/nsp31228P1228delCCA---44AY.40.000006
ORF1ab/nsp31228P1228delCCA---33B.10.000027
ORF1ab/nsp31228P1228delCCA---33B.1.10.000054
ORF1ab/nsp31228P1228delCCA---22AY.1200.000074
ORF1ab/nsp31228P1228delCCA---22AY.1210.000271
ORF1ab/nsp31228P1228delCCA---22AY.250.000012
ORF1ab/nsp31228P1228delCCA---22AY.430.000009
ORF1ab/nsp31228P1228delCCA---22AY.450.000243
ORF1ab/nsp31228P1228delCCA---22AY.540.000191
ORF1ab/nsp31228P1228delCCA---11AY.1010.00049
ORF1ab/nsp31228P1228delCCA---11AY.230.00007
ORF1ab/nsp31228P1228delCCA---11AY.30.00001
ORF1ab/nsp31228P1228delCCA---11AY.330.000067
ORF1ab/nsp31228P1228delCCA---11AY.390.000025
ORF1ab/nsp31228P1228delCCA---11AY.460.000104
ORF1ab/nsp31228P1228delCCA---11AY.46.50.000198
ORF1ab/nsp31228P1228delCCA---11AY.660.00107
ORF1ab/nsp31228P1228delCCA---11AY.740.000116
ORF1ab/nsp31228P1228delCCA---11AY.990.001049
ORF1ab/nsp31228P1228delCCA---11B.1.1.1530.001095
ORF1ab/nsp31228P1228delCCA---11B.1.1.1590.004673
ORF1ab/nsp31228P1228delCCA---11B.1.1.2140.000055
ORF1ab/nsp31228P1228delCCA---11B.1.1.3040.002809
ORF1ab/nsp31228P1228delCCA---11B.1.1.3480.000796
ORF1ab/nsp31228P1228delCCA---11B.1.177.350.000691
ORF1ab/nsp31228P1228delCCA---11B.1.177.620.001192
ORF1ab/nsp31228P1228delCCA---11B.1.177.830.001481
ORF1ab/nsp31228P1228delCCA---11B.1.20.000009
ORF1ab/nsp31228P1228delCCA---11B.1.428.20.033333
ORF1ab/nsp31228P1228delCCA---11B.1.6300.005236
ORF1ab/nsp31228P1228delCCA---11C.20.016129
ORF1ab/nsp31228P1228delCCA---11P.10.000016