CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P1103del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31103P1103del1P1921del1delCca-ca1360.4615386026-6028
ORF1ab/nsp31103P1103del1P1921del1delccAcc-1360.4615386026-6028
ORF1ab/nsp31103P1103del1P1921del1delcCAcT-1310.07692316026-6028

Details of the mutation P1103del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31103P1103del1Cca-ca613All0.000001
ORF1ab/nsp31103P1103del1ccAcc-613All0.000001
ORF1ab/nsp31103P1103del1cCAcT-113All0
ORF1ab/nsp31103P1103del1Cca-ca12B.1.1.70.000001
ORF1ab/nsp31103P1103del1ccAcc-12B.1.1.70.000001
ORF1ab/nsp31103P1103del1ccAcc-22B.1.20.000018
ORF1ab/nsp31103P1103del1Cca-ca11AY.260.000028
ORF1ab/nsp31103P1103del1cCAcT-11AY.430.000004
ORF1ab/nsp31103P1103del1Cca-ca11AY.440.000006
ORF1ab/nsp31103P1103del1Cca-ca11B0.000128
ORF1ab/nsp31103P1103del1Cca-ca11B.10.000009
ORF1ab/nsp31103P1103del1Cca-ca11B.1.177.180.00116
ORF1ab/nsp31103P1103del1ccAcc-11B.1.5160.001957
ORF1ab/nsp31103P1103del1ccAcc-11B.1.5950.000261
ORF1ab/nsp31103P1103del1ccAcc-11Q.80.000165