CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = P1103L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31103P1103LP1921LnonsyncCacTa823182100.9974496026-6028
ORF1ab/nsp31103P1103LP1921LnonsynCCaTTa8231140.001700896026-6028
ORF1ab/nsp31103P1103LP1921LnonsyncCAcTG823130.0003644766026-6028
ORF1ab/nsp31103P1103LP1921LnonsynCCATTG823120.0002429846026-6028
ORF1ab/nsp31103P1103LP1921LnonsyncCAcTC823110.0001214926026-6028
ORF1ab/nsp31103P1103LP1921LnonsyncCAcTT823110.0001214926026-6028

Details of the mutation P1103L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31103P1103LcCacTa82108231All0.00157
ORF1ab/nsp31103P1103LCCaTTa148231All0.000003
ORF1ab/nsp31103P1103LcCAcTG38231All0.000001
ORF1ab/nsp31103P1103LCCATTG28231All0
ORF1ab/nsp31103P1103LcCAcTT18231All0
ORF1ab/nsp31103P1103LcCAcTC18231All0
ORF1ab/nsp31103P1103LcCacTa11961198B.1.1.70.001071
ORF1ab/nsp31103P1103LCCaTTa21198B.1.1.70.000002
ORF1ab/nsp31103P1103LcCacTa992992B.1.2430.069028
ORF1ab/nsp31103P1103LcCacTa802803AY.430.003553
ORF1ab/nsp31103P1103LCCaTTa1803AY.430.000004
ORF1ab/nsp31103P1103LcCacTa609609AY.40.000948
ORF1ab/nsp31103P1103LcCacTa272272AY.420.010943
ORF1ab/nsp31103P1103LcCacTa265265AY.60.010899
ORF1ab/nsp31103P1103LcCacTa258260B.1.617.20.000971
ORF1ab/nsp31103P1103LcCAcTG1260B.1.617.20.000004
ORF1ab/nsp31103P1103LcCAcTC1260B.1.617.20.000004
ORF1ab/nsp31103P1103LcCacTa252252B.1.177.770.183007
ORF1ab/nsp31103P1103LcCacTa223224B.10.002043
ORF1ab/nsp31103P1103LcCAcTT1224B.10.000009
ORF1ab/nsp31103P1103LcCacTa191191B.1.20.001682
ORF1ab/nsp31103P1103LcCacTa180180B.1.1770.00237
ORF1ab/nsp31103P1103LcCacTa169169AY.260.004784
ORF1ab/nsp31103P1103LcCacTa148148B.1.2210.010513
ORF1ab/nsp31103P1103LcCacTa129129B.1.5250.014598
ORF1ab/nsp31103P1103LcCacTa114114AY.30.001134
ORF1ab/nsp31103P1103LcCacTa102102AY.340.00989
ORF1ab/nsp31103P1103LcCacTa9494B.1.2370.467662
ORF1ab/nsp31103P1103LcCacTa8888P.1.140.004207
ORF1ab/nsp31103P1103LcCacTa8585AY.1030.000528
ORF1ab/nsp31103P1103LcCacTa8585AY.440.000517
ORF1ab/nsp31103P1103LcCacTa8484AY.250.000505
ORF1ab/nsp31103P1103LcCacTa8181AY.1010.039725
ORF1ab/nsp31103P1103LcCacTa7979B.1.4270.003989
ORF1ab/nsp31103P1103LcCacTa6161P.10.000961
ORF1ab/nsp31103P1103LcCacTa5959B0.007541
ORF1ab/nsp31103P1103LcCacTa5555B.1.1.5190.002184
ORF1ab/nsp31103P1103LcCacTa5454B.1.2340.007125
ORF1ab/nsp31103P1103LcCacTa5353B.1.360.007733
ORF1ab/nsp31103P1103LcCacTa5050AY.160.018983
ORF1ab/nsp31103P1103LcCacTa4949AY.1170.004141
ORF1ab/nsp31103P1103LcCacTa4949AY.390.001211
ORF1ab/nsp31103P1103LcCacTa4647B.1.10.000834
ORF1ab/nsp31103P1103LCCaTTa147B.1.10.000018
ORF1ab/nsp31103P1103LcCacTa3939B.1.1.3260.068662
ORF1ab/nsp31103P1103LcCacTa3838AY.1080.041896
ORF1ab/nsp31103P1103LcCacTa3636AY.1130.005126
ORF1ab/nsp31103P1103LcCacTa3535B.1.1600.001092
ORF1ab/nsp31103P1103LcCacTa3434AY.750.001905
ORF1ab/nsp31103P1103LcCacTa3131B.1.1.3770.042818
ORF1ab/nsp31103P1103LcCacTa2727AY.290.000426
ORF1ab/nsp31103P1103LcCacTa2626B.1.4290.000612
ORF1ab/nsp31103P1103LcCacTa2323B.1.1990.095041
ORF1ab/nsp31103P1103LcCacTa2323B.1.5760.020852
ORF1ab/nsp31103P1103LcCacTa2222B.1.177.320.02969
ORF1ab/nsp31103P1103LcCacTa2222B.1.177.600.004806
ORF1ab/nsp31103P1103LcCacTa2121AY.200.000816
ORF1ab/nsp31103P1103LcCacTa2020C.370.002321
ORF1ab/nsp31103P1103LcCacTa1919AY.1070.008854
ORF1ab/nsp31103P1103LcCacTa1919AY.1180.00119
ORF1ab/nsp31103P1103LcCacTa1919AY.50.000392
ORF1ab/nsp31103P1103LcCacTa1919B.1.3510.000565
ORF1ab/nsp31103P1103LcCacTa1919B.1.5650.015397
ORF1ab/nsp31103P1103LcCacTa1818B.1.1.2770.013657
ORF1ab/nsp31103P1103LcCacTa1717B.1.2580.001131
ORF1ab/nsp31103P1103LcCacTa1717B.1.5800.069106
ORF1ab/nsp31103P1103LcCacTa1616AY.20.005698
ORF1ab/nsp31103P1103LcCacTa1616AY.270.001036
ORF1ab/nsp31103P1103LcCacTa1616AY.450.001947
ORF1ab/nsp31103P1103LcCacTa1414B.1.5170.005978
ORF1ab/nsp31103P1103LcCacTa1313AY.1020.000345
ORF1ab/nsp31103P1103LcCacTa1313B.1.1.2840.001396
ORF1ab/nsp31103P1103LcCacTa1313B.1.6370.00095
ORF1ab/nsp31103P1103LcCacTa1212AY.1190.000424
ORF1ab/nsp31103P1103LcCacTa1212B.1.1.3060.005261
ORF1ab/nsp31103P1103LcCacTa1212B.1.5960.001046
ORF1ab/nsp31103P1103LcCacTa1111B.1.1.2890.022917
ORF1ab/nsp31103P1103LcCacTa1010AY.540.000953
ORF1ab/nsp31103P1103LcCacTa1010AY.650.00533
ORF1ab/nsp31103P1103LcCacTa1010AY.880.008842
ORF1ab/nsp31103P1103LcCacTa1010B.1.1.3180.003018
ORF1ab/nsp31103P1103LcCacTa1010B.1.1260.012755
ORF1ab/nsp31103P1103LCCaTTa1010B.1.4970.003148
ORF1ab/nsp31103P1103LcCacTa99AY.1200.000335
ORF1ab/nsp31103P1103LcCacTa99AY.46.60.00065
ORF1ab/nsp31103P1103LcCacTa99B.1.1.280.002801
ORF1ab/nsp31103P1103LcCacTa99B.1.36.290.004656
ORF1ab/nsp31103P1103LcCacTa99B.1.5870.017078
ORF1ab/nsp31103P1103LcCacTa99P.20.00168
ORF1ab/nsp31103P1103LcCacTa99Q.70.01
ORF1ab/nsp31103P1103LcCacTa88AY.230.000558
ORF1ab/nsp31103P1103LcCacTa88B.1.1.2200.01487
ORF1ab/nsp31103P1103LcCacTa77AY.330.000467
ORF1ab/nsp31103P1103LcCacTa77AY.360.001037
ORF1ab/nsp31103P1103LcCacTa77B.1.2400.001509
ORF1ab/nsp31103P1103LcCacTa77B.1.2420.132075
ORF1ab/nsp31103P1103LcCacTa77B.1.36.170.003458
ORF1ab/nsp31103P1103LcCacTa77B.1.6210.00062
ORF1ab/nsp31103P1103LcCacTa77B.1.9.40.042945
ORF1ab/nsp31103P1103LcCacTa77P.1.150.001626
ORF1ab/nsp31103P1103LcCacTa77Q.10.000884
ORF1ab/nsp31103P1103LcCacTa66AY.1210.000812
ORF1ab/nsp31103P1103LcCacTa66AY.140.000528
ORF1ab/nsp31103P1103LcCacTa66AY.470.000187
ORF1ab/nsp31103P1103LcCacTa66B.1.1.2140.000333
ORF1ab/nsp31103P1103LcCacTa66B.1.4160.007614
ORF1ab/nsp31103P1103LcCacTa66B.1.4530.019417
ORF1ab/nsp31103P1103LcCacTa66Q.80.000989
ORF1ab/nsp31103P1103LcCacTa55A.270.008278
ORF1ab/nsp31103P1103LcCacTa55A.280.013228
ORF1ab/nsp31103P1103LcCacTa55AY.39.10.000198
ORF1ab/nsp31103P1103LcCacTa55AY.610.000524
ORF1ab/nsp31103P1103LcCacTa55AY.620.002179
ORF1ab/nsp31103P1103LcCacTa55B.1.1.2220.00102
ORF1ab/nsp31103P1103LcCacTa55B.1.3490.003574
ORF1ab/nsp31103P1103LcCacTa55B.1.3980.014881
ORF1ab/nsp31103P1103LcCacTa55B.1.5260.000118
ORF1ab/nsp31103P1103LcCacTa55B.1.617.10.000645
ORF1ab/nsp31103P1103LcCacTa55P.1.40.004883
ORF1ab/nsp31103P1103LcCAcTG240.111111
ORF1ab/nsp31103P1103LCCATTG240.111111
ORF1ab/nsp31103P1103LcCacTa44AY.410.001176
ORF1ab/nsp31103P1103LcCacTa44AY.460.000416
ORF1ab/nsp31103P1103LcCacTa44AY.740.000463
ORF1ab/nsp31103P1103LcCacTa44AY.980.000316
ORF1ab/nsp31103P1103LcCacTa44B.1.1.330.001684
ORF1ab/nsp31103P1103LcCacTa44B.1.177.440.002076
ORF1ab/nsp31103P1103LcCacTa44B.1.177.70.000659
ORF1ab/nsp31103P1103LcCacTa44B.1.3110.001098
ORF1ab/nsp31103P1103LcCacTa33AY.1050.001929
ORF1ab/nsp31103P1103LcCacTa33AY.1060.001005
ORF1ab/nsp31103P1103LcCacTa33AY.3.10.000256
ORF1ab/nsp31103P1103LcCacTa33AY.4.20.000065
ORF1ab/nsp31103P1103LcCacTa33AY.46.40.000494
ORF1ab/nsp31103P1103LcCacTa33AY.75.10.000541
ORF1ab/nsp31103P1103LcCacTa33AY.90.000203
ORF1ab/nsp31103P1103LcCacTa33AY.9.10.000251
ORF1ab/nsp31103P1103LcCacTa33B.1.1.2410.006211
ORF1ab/nsp31103P1103LcCacTa33B.1.1.3720.002066
ORF1ab/nsp31103P1103LcCacTa33B.1.1.4340.001046
ORF1ab/nsp31103P1103LcCacTa33B.1.177.570.000843
ORF1ab/nsp31103P1103LcCacTa33B.1.177.810.000568
ORF1ab/nsp31103P1103LcCacTa33B.1.177.860.00055
ORF1ab/nsp31103P1103LcCacTa33B.1.5090.002597
ORF1ab/nsp31103P1103LcCacTa33B.1.5950.000783
ORF1ab/nsp31103P1103LcCacTa33B.1.6000.017544
ORF1ab/nsp31103P1103LcCacTa33C.160.003181
ORF1ab/nsp31103P1103LcCacTa33R.10.00027
ORF1ab/nsp31103P1103LcCacTa22AY.1000.000092
ORF1ab/nsp31103P1103LcCacTa22AY.1100.000225
ORF1ab/nsp31103P1103LcCacTa22AY.1110.000366
ORF1ab/nsp31103P1103LcCacTa22AY.16.10.00094
ORF1ab/nsp31103P1103LcCacTa22AY.380.000999
ORF1ab/nsp31103P1103LcCacTa22AY.550.001835
ORF1ab/nsp31103P1103LcCacTa22AY.9.20.000073
ORF1ab/nsp31103P1103LcCacTa22B.1.1.1760.000879
ORF1ab/nsp31103P1103LcCacTa22B.1.1.2430.008163
ORF1ab/nsp31103P1103LcCacTa22B.1.1.3480.001592
ORF1ab/nsp31103P1103LcCacTa22B.1.1.4320.002532
ORF1ab/nsp31103P1103LcCacTa22B.1.1.460.008734
ORF1ab/nsp31103P1103LcCacTa22B.1.1.700.000682
ORF1ab/nsp31103P1103LcCacTa22B.1.110.30.001437
ORF1ab/nsp31103P1103LcCacTa22B.1.1610.034483
ORF1ab/nsp31103P1103LcCacTa22B.1.177.110.003396
ORF1ab/nsp31103P1103LcCacTa22B.1.177.150.001262
ORF1ab/nsp31103P1103LcCacTa22B.1.177.330.003289
ORF1ab/nsp31103P1103LcCacTa22B.1.2800.014286
ORF1ab/nsp31103P1103LcCacTa22B.1.36.180.00084
ORF1ab/nsp31103P1103LcCacTa22B.1.3670.001585
ORF1ab/nsp31103P1103LcCacTa22B.1.4250.005988
ORF1ab/nsp31103P1103LcCacTa22B.1.4280.002041
ORF1ab/nsp31103P1103LcCacTa22B.1.5470.04878
ORF1ab/nsp31103P1103LcCacTa22B.1.5820.000981
ORF1ab/nsp31103P1103LcCacTa22B.1.6120.005305
ORF1ab/nsp31103P1103LcCacTa22C.360.001821
ORF1ab/nsp31103P1103LcCacTa22P.1.170.000324
ORF1ab/nsp31103P1103LcCacTa22P.1.70.000639
ORF1ab/nsp31103P1103LcCacTa22Q.30.00029
ORF1ab/nsp31103P1103LcCacTa11A0.000387
ORF1ab/nsp31103P1103LcCacTa11A.2.50.000499
ORF1ab/nsp31103P1103LcCacTa11A.290.005319
ORF1ab/nsp31103P1103LcCacTa11AY.10.000396
ORF1ab/nsp31103P1103LcCacTa11AY.1090.00074
ORF1ab/nsp31103P1103LcCacTa11AY.1140.000231
ORF1ab/nsp31103P1103LcCacTa11AY.1160.000287
ORF1ab/nsp31103P1103LcCacTa11AY.120.000316
ORF1ab/nsp31103P1103LcCacTa11AY.130.000161
ORF1ab/nsp31103P1103LcCacTa11AY.29.10.000221
ORF1ab/nsp31103P1103LcCacTa11AY.320.000532
ORF1ab/nsp31103P1103LcCacTa11AY.4.50.000107
ORF1ab/nsp31103P1103LcCacTa11AY.46.10.001027
ORF1ab/nsp31103P1103LcCacTa11AY.46.20.000635
ORF1ab/nsp31103P1103LcCacTa11AY.46.50.000198
ORF1ab/nsp31103P1103LcCacTa11AY.490.003195
ORF1ab/nsp31103P1103LcCacTa11AY.5.30.000337
ORF1ab/nsp31103P1103LcCacTa11AY.510.000909
ORF1ab/nsp31103P1103LcCacTa11AY.580.000907
ORF1ab/nsp31103P1103LcCacTa11AY.670.000464
ORF1ab/nsp31103P1103LcCacTa11AY.700.000209
ORF1ab/nsp31103P1103LcCacTa11AY.770.001127
ORF1ab/nsp31103P1103LcCacTa11AY.790.001211
ORF1ab/nsp31103P1103LcCacTa11AY.930.000273
ORF1ab/nsp31103P1103LcCacTa11AY.99.20.000092
ORF1ab/nsp31103P1103LcCacTa11AZ.20.000821
ORF1ab/nsp31103P1103LcCacTa11B.1.1.1010.01
ORF1ab/nsp31103P1103LcCacTa11B.1.1.1340.011364
ORF1ab/nsp31103P1103LcCacTa11B.1.1.1700.001247
ORF1ab/nsp31103P1103LcCacTa11B.1.1.1890.001513
ORF1ab/nsp31103P1103LcCacTa11B.1.1.1920.002309
ORF1ab/nsp31103P1103LcCacTa11B.1.1.2440.015385
ORF1ab/nsp31103P1103LcCacTa11B.1.1.250.000569
ORF1ab/nsp31103P1103LcCacTa11B.1.1.2630.001558
ORF1ab/nsp31103P1103LcCacTa11B.1.1.2690.001353
ORF1ab/nsp31103P1103LcCacTa11B.1.1.2740.005051
ORF1ab/nsp31103P1103LcCacTa11B.1.1.2910.000742
ORF1ab/nsp31103P1103LcCacTa11B.1.1.2980.000862
ORF1ab/nsp31103P1103LcCacTa11B.1.1.3740.002375
ORF1ab/nsp31103P1103LcCacTa11B.1.1.390.00051
ORF1ab/nsp31103P1103LcCacTa11B.1.1.3980.003226
ORF1ab/nsp31103P1103LcCacTa11B.1.1.4160.000905
ORF1ab/nsp31103P1103LcCacTa11B.1.1.4480.002033
ORF1ab/nsp31103P1103LcCacTa11B.1.1.630.000386
ORF1ab/nsp31103P1103LcCacTa11B.1.1620.005025
ORF1ab/nsp31103P1103LcCacTa11B.1.177.100.000878
ORF1ab/nsp31103P1103LcCacTa11B.1.177.120.000152
ORF1ab/nsp31103P1103LcCacTa11B.1.177.460.000918
ORF1ab/nsp31103P1103LcCacTa11B.1.177.580.001332
ORF1ab/nsp31103P1103LcCacTa11B.1.177.650.000665
ORF1ab/nsp31103P1103LcCacTa11B.1.177.730.000566
ORF1ab/nsp31103P1103LcCacTa11B.1.177.750.001041
ORF1ab/nsp31103P1103LcCacTa11B.1.177.790.002342
ORF1ab/nsp31103P1103LcCacTa11B.1.1890.004292
ORF1ab/nsp31103P1103LcCacTa11B.1.2060.000816
ORF1ab/nsp31103P1103LcCacTa11B.1.2100.002132
ORF1ab/nsp31103P1103LcCacTa11B.1.214.20.0006
ORF1ab/nsp31103P1103LcCacTa11B.1.2200.01087
ORF1ab/nsp31103P1103LcCacTa11B.1.2390.001221
ORF1ab/nsp31103P1103LcCacTa11B.1.258.110.000396
ORF1ab/nsp31103P1103LcCacTa11B.1.258.140.00098
ORF1ab/nsp31103P1103LcCacTa11B.1.2670.018519
ORF1ab/nsp31103P1103LcCacTa11B.1.2790.000514
ORF1ab/nsp31103P1103LcCacTa11B.1.3100.047619
ORF1ab/nsp31103P1103LcCacTa11B.1.36.100.004785
ORF1ab/nsp31103P1103LcCacTa11B.1.36.190.009259
ORF1ab/nsp31103P1103LcCacTa11B.1.36.220.001208
ORF1ab/nsp31103P1103LcCacTa11B.1.36.350.002604
ORF1ab/nsp31103P1103LcCacTa11B.1.3610.001289
ORF1ab/nsp31103P1103LcCacTa11B.1.3690.000285
ORF1ab/nsp31103P1103LcCacTa11B.1.3710.001122
ORF1ab/nsp31103P1103LcCacTa11B.1.3750.00082
ORF1ab/nsp31103P1103LcCacTa11B.1.3780.006849
ORF1ab/nsp31103P1103LcCacTa11B.1.3970.004854
ORF1ab/nsp31103P1103LcCacTa11B.1.3990.001934
ORF1ab/nsp31103P1103LcCacTa11B.1.4000.000429
ORF1ab/nsp31103P1103LcCacTa11B.1.416.10.001563
ORF1ab/nsp31103P1103LcCacTa11B.1.4260.001009
ORF1ab/nsp31103P1103LcCacTa11B.1.438.10.000107
ORF1ab/nsp31103P1103LcCacTa11B.1.438.20.019231
ORF1ab/nsp31103P1103LcCacTa11B.1.4560.003268
ORF1ab/nsp31103P1103LcCacTa11B.1.466.20.000391
ORF1ab/nsp31103P1103LcCacTa11B.1.4700.001404
ORF1ab/nsp31103P1103LcCacTa11B.1.4730.019231
ORF1ab/nsp31103P1103LcCacTa11B.1.5330.009615
ORF1ab/nsp31103P1103LcCacTa11B.1.5370.02
ORF1ab/nsp31103P1103LcCacTa11B.1.5400.009709
ORF1ab/nsp31103P1103LcCacTa11B.1.5460.003704
ORF1ab/nsp31103P1103LcCacTa11B.1.5610.000397
ORF1ab/nsp31103P1103LcCacTa11B.1.5640.000426
ORF1ab/nsp31103P1103LcCacTa11B.1.5770.000687
ORF1ab/nsp31103P1103LcCacTa11B.1.621.10.000506
ORF1ab/nsp31103P1103LcCacTa11B.1.6230.000536
ORF1ab/nsp31103P1103LcCacTa11B.1.6280.000352
ORF1ab/nsp31103P1103LcCacTa11B.1.780.008547
ORF1ab/nsp31103P1103LcCacTa11B.1.90.006173
ORF1ab/nsp31103P1103LcCacTa11B.60.00091
ORF1ab/nsp31103P1103LcCacTa11B.6.60.000889
ORF1ab/nsp31103P1103LcCacTa11C.300.001727
ORF1ab/nsp31103P1103LcCacTa11C.350.000774
ORF1ab/nsp31103P1103LcCacTa11C.390.018868
ORF1ab/nsp31103P1103LcCacTa11D.20.000075
ORF1ab/nsp31103P1103LcCacTa11N.50.001767
ORF1ab/nsp31103P1103LcCacTa11N.60.007092
ORF1ab/nsp31103P1103LcCacTa11P.1.10.000318
ORF1ab/nsp31103P1103LcCacTa11Q.40.000455