CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 891 | N891N | N1709N | syn | aaC | aaT | 15364 | 15364 | 1 | 5390-5392 |
Details of the mutation N891N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 15364 | 15364 | All | 0.002939 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3975 | 3975 | AY.4 | 0.006187 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3262 | 3262 | B.1.617.2 | 0.012283 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2599 | 2599 | AY.43 | 0.011515 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1310 | 1310 | B.1.1.7 | 0.001173 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 464 | 464 | AY.25 | 0.002791 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 278 | 278 | AY.39 | 0.00687 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 255 | 255 | AY.44 | 0.001552 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 236 | 236 | B.1.429 | 0.005553 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 214 | 214 | AY.103 | 0.001329 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 154 | 154 | B.1.2 | 0.001356 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 139 | 139 | AY.102 | 0.003685 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 98 | 98 | AS.1 | 0.933333 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 95 | 95 | AY.3 | 0.000945 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 91 | 91 | AY.109 | 0.067308 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 91 | 91 | B.1.177 | 0.001198 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 90 | 90 | AY.9.1 | 0.007535 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 88 | 88 | B.1 | 0.000806 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 71 | 71 | B.1.243 | 0.004941 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 65 | 65 | P.1 | 0.001024 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 62 | 62 | AY.119 | 0.002189 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 61 | 61 | B.1.177.86 | 0.011191 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 54 | 54 | AY.46 | 0.00562 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 52 | 52 | B.1.1 | 0.000943 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 51 | 51 | B.1.160 | 0.001591 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 48 | 48 | AY.4.2 | 0.001041 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 48 | 48 | AY.5.3 | 0.016194 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 39 | 39 | B.1.177.82 | 0.018616 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 35 | 35 | AY.111 | 0.00641 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 34 | 34 | B.1.443 | 0.158879 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 30 | 30 | AY.9.2.1 | 0.059289 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 29 | 29 | AY.29 | 0.000457 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 26 | 26 | AY.5.4 | 0.007194 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 26 | 26 | AY.57 | 0.01706 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 25 | 25 | AY.5 | 0.000516 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 24 | 24 | AY.20 | 0.000933 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 24 | 24 | AY.9 | 0.001622 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 23 | 23 | A.2.5 | 0.011477 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 22 | 22 | AY.33 | 0.001469 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 22 | 22 | D.2 | 0.001651 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 21 | 21 | AY.26 | 0.000595 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 20 | 20 | B.1.1.519 | 0.000794 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 20 | 20 | P.1.1 | 0.006353 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 19 | 19 | AY.41 | 0.005585 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 19 | 19 | AY.98.1 | 0.00092 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 18 | 18 | AY.121 | 0.002436 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 18 | 18 | B.1.36 | 0.002626 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 17 | 17 | B.1.1.318 | 0.00513 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 16 | 16 | AY.100 | 0.000736 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 16 | 16 | AY.106 | 0.005358 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 15 | 15 | AY.37 | 0.004741 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 15 | 15 | AY.77 | 0.016911 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 15 | 15 | B.1.258.17 | 0.00156 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 14 | 14 | B.1.1.33 | 0.005892 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 14 | 14 | B.1.525 | 0.001584 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 14 | 14 | B.1.561 | 0.005558 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 14 | 14 | B.1.621 | 0.001239 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 13 | 13 | AY.9.2 | 0.000477 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 13 | 13 | C.37 | 0.001509 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 12 | 12 | AE.8 | 0.005868 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 12 | 12 | AY.114 | 0.002773 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 12 | 12 | AY.14 | 0.001056 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 12 | 12 | AY.4.2.1 | 0.001788 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 12 | 12 | AY.42 | 0.000483 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 12 | 12 | Q.7 | 0.013333 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 11 | 11 | AY.117 | 0.00093 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 11 | 11 | AY.23 | 0.000767 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 11 | 11 | AY.46.6 | 0.000794 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 11 | 11 | B.1.1.176 | 0.004833 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 11 | 11 | B.1.258 | 0.000732 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 11 | 11 | B.1.351 | 0.000327 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 11 | 11 | P.1.17 | 0.001779 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 11 | 11 | P.1.7 | 0.003512 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 10 | 10 | AY.88 | 0.008842 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 10 | 10 | B | 0.001278 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 10 | 10 | B.1.221 | 0.00071 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 10 | 10 | B.1.349 | 0.007148 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 10 | 10 | B.1.526 | 0.000235 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 10 | 10 | P.1.14 | 0.000478 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 9 | 9 | AY.46.2 | 0.005718 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 9 | 9 | AY.47 | 0.00028 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 9 | 9 | AY.59 | 0.004767 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 9 | 9 | Q.1 | 0.001137 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 8 | 8 | AY.3.1 | 0.000682 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 8 | 8 | AY.45 | 0.000973 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 8 | 8 | AY.61 | 0.000838 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 8 | 8 | B.1.1.25 | 0.004548 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 7 | 7 | AY.118 | 0.000439 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 7 | 7 | AY.120 | 0.00026 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 7 | 7 | AY.53 | 0.002013 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 7 | 7 | AY.92 | 0.002011 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 7 | 7 | AY.98 | 0.000553 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 7 | 7 | B.1.36.8 | 0.007 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 7 | 7 | Q.8 | 0.001154 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 6 | 6 | A.3 | 0.012579 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 6 | 6 | AY.54 | 0.000572 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 6 | 6 | AZ.2 | 0.004926 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 6 | 6 | B.1.128 | 0.003812 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 6 | 6 | B.1.389 | 0.006012 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 6 | 6 | C.36.3 | 0.003403 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | AY.4.3 | 0.004209 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | AY.40 | 0.004822 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | AY.52 | 0.004072 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | AY.6 | 0.000206 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | AY.68 | 0.001369 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | AY.7.1 | 0.000564 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | B.1.1.434 | 0.001743 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | B.1.192 | 0.046296 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | B.1.234 | 0.00066 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | B.1.311 | 0.001373 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | B.1.427 | 0.000252 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | B.1.596 | 0.000436 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | B.1.609 | 0.002397 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | B.1.617.1 | 0.000645 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | B.1.619.1 | 0.003207 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 5 | 5 | B.1.637 | 0.000365 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | AY.108 | 0.00441 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | AY.110 | 0.000451 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | AY.113 | 0.00057 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | AY.21 | 0.00759 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | AY.36 | 0.000593 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | AY.46.4 | 0.000658 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | AY.58 | 0.00363 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | AY.67 | 0.001857 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | AY.70 | 0.000834 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | AY.75 | 0.000224 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | AY.75.1 | 0.000721 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | AY.99 | 0.004197 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | B.1.1.28 | 0.001245 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | B.1.1.322 | 0.035088 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | B.1.177.12 | 0.000607 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | B.1.221.4 | 0.016667 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | B.1.438.1 | 0.000429 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | B.1.466.2 | 0.001565 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | B.1.575 | 0.001214 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | B.1.575.1 | 0.009756 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 4 | 4 | Q.4 | 0.001819 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | A.2.5.2 | 0.004717 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | AY.116 | 0.00086 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | AY.13 | 0.000483 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | AY.29.1 | 0.000662 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | AY.32 | 0.001597 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | AY.34.1 | 0.00153 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | AY.39.1 | 0.000119 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | AY.46.1 | 0.00308 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | AY.69 | 0.00056 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | AY.7 | 0.000588 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | AY.84 | 0.001312 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | B.1.1.153 | 0.003286 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | B.1.1.317 | 0.001235 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | B.1.177.57 | 0.000843 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | B.1.36.19 | 0.027778 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | C.16 | 0.003181 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | P.1.12 | 0.001452 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 3 | 3 | R.1 | 0.00027 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | AD.2 | 0.000438 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | AY.10 | 0.00106 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | AY.105 | 0.001286 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | AY.62 | 0.000871 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | AY.72 | 0.002721 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | AY.89 | 0.009804 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | AY.95 | 0.001522 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.1.214 | 0.000111 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.1.243 | 0.008163 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.146 | 0.008475 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.213 | 0.029851 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.221.1 | 0.005814 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.239 | 0.002442 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.240 | 0.000431 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.258.11 | 0.000793 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.36.16 | 0.002849 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.36.29 | 0.001035 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.362 | 0.003082 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.409 | 0.001563 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.428 | 0.002041 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.545 | 0.028986 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | B.1.628 | 0.000705 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | C.36 | 0.001821 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | N.5 | 0.003534 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | P.1.2 | 0.002312 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | P.1.6 | 0.003891 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 2 | 2 | Q.3 | 0.00029 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.104 | 0.001984 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.15 | 0.002222 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.27 | 0.000065 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.28 | 0.00189 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.56 | 0.001605 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.120 | 0.033333 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.172 | 0.018182 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.205 | 0.003717 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.279 | 0.001121 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.297 | 0.002237 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.315 | 0.008475 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.337 | 0.003597 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.359 | 0.027778 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.440 | 0.011765 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.525 | 0.005464 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.1.71 | 0.006061 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.160.30 | 0.002976 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.168 | 0.027027 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.169 | 0.014925 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.177.30 | 0.002513 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.177.46 | 0.000918 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.177.68 | 0.015152 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.179 | 0.003759 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.22 | 0.001318 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.235 | 0.002519 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.252 | 0.006623 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.338 | 0.008621 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.36.38 | 0.001642 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.420 | 0.010417 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.446 | 0.02 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.509 | 0.000866 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.569 | 0.014493 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.1.595.1 | 0.005848 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.23 | 0.002924 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | B.31 | 0.003731 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | K.3 | 0.006173 |
ORF1ab/nsp3 | 891 | N891N | aaC | aaT | 1 | 1 | P.7 | 0.004367 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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