CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = N760N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3760N760NN1578NsynaaCaaT103801038014997-4999

Details of the mutation N760N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3760N760NaaCaaT1038010380All0.001985
ORF1ab/nsp3760N760NaaCaaT22762276B.1.1.70.002038
ORF1ab/nsp3760N760NaaCaaT13911391B.1.617.20.005238
ORF1ab/nsp3760N760NaaCaaT12181218AY.30.012115
ORF1ab/nsp3760N760NaaCaaT638638AY.40.000993
ORF1ab/nsp3760N760NaaCaaT479479P.10.007546
ORF1ab/nsp3760N760NaaCaaT391391B.1.1.3160.361702
ORF1ab/nsp3760N760NaaCaaT327327AY.440.00199
ORF1ab/nsp3760N760NaaCaaT232232AY.160.088079
ORF1ab/nsp3760N760NaaCaaT206206B.1.1.5190.00818
ORF1ab/nsp3760N760NaaCaaT205205AY.250.001233
ORF1ab/nsp3760N760NaaCaaT197197B.1.177.180.228538
ORF1ab/nsp3760N760NaaCaaT182182AY.1030.00113
ORF1ab/nsp3760N760NaaCaaT141141B.1.20.001242
ORF1ab/nsp3760N760NaaCaaT135135B.1.177.860.024766
ORF1ab/nsp3760N760NaaCaaT123123B.1.1770.00162
ORF1ab/nsp3760N760NaaCaaT108108B.10.000989
ORF1ab/nsp3760N760NaaCaaT9595B.1.4290.002235
ORF1ab/nsp3760N760NaaCaaT8888B.1.5260.002068
ORF1ab/nsp3760N760NaaCaaT8080B.1.10.001451
ORF1ab/nsp3760N760NaaCaaT6868R.20.985507
ORF1ab/nsp3760N760NaaCaaT6464AY.1020.001697
ORF1ab/nsp3760N760NaaCaaT6464B.1.3510.001902
ORF1ab/nsp3760N760NaaCaaT6363AY.50.001301
ORF1ab/nsp3760N760NaaCaaT6262AY.1210.00839
ORF1ab/nsp3760N760NaaCaaT6060AY.430.000266
ORF1ab/nsp3760N760NaaCaaT5353C.370.006151
ORF1ab/nsp3760N760NaaCaaT5050AY.390.001236
ORF1ab/nsp3760N760NaaCaaT4949B.1.160.280.143275
ORF1ab/nsp3760N760NaaCaaT4949B.1.6210.004337
ORF1ab/nsp3760N760NaaCaaT4646B.1.6370.003361
ORF1ab/nsp3760N760NaaCaaT4343B.1.4270.002171
ORF1ab/nsp3760N760NaaCaaT4343XA0.955556
ORF1ab/nsp3760N760NaaCaaT3636AY.1100.004057
ORF1ab/nsp3760N760NaaCaaT3333AY.940.014608
ORF1ab/nsp3760N760NaaCaaT3030AY.750.001681
ORF1ab/nsp3760N760NaaCaaT2727AY.1200.001004
ORF1ab/nsp3760N760NaaCaaT2626P.20.004853
ORF1ab/nsp3760N760NaaCaaT2525AY.680.006844
ORF1ab/nsp3760N760NaaCaaT2525B.1.4311
ORF1ab/nsp3760N760NaaCaaT2323B.1.360.003356
ORF1ab/nsp3760N760NaaCaaT2222AY.200.000855
ORF1ab/nsp3760N760NaaCaaT2121AY.270.001359
ORF1ab/nsp3760N760NaaCaaT2121AY.290.000331
ORF1ab/nsp3760N760NaaCaaT1818AY.1170.001521
ORF1ab/nsp3760N760NaaCaaT1717AY.1000.000782
ORF1ab/nsp3760N760NaaCaaT1717AY.560.027287
ORF1ab/nsp3760N760NaaCaaT1717AZ.30.025836
ORF1ab/nsp3760N760NaaCaaT1717B.1.1.3050.065637
ORF1ab/nsp3760N760NaaCaaT1616AY.4.20.000347
ORF1ab/nsp3760N760NaaCaaT1515B.1.2580.000998
ORF1ab/nsp3760N760NaaCaaT1515P.1.140.000717
ORF1ab/nsp3760N760NaaCaaT1414B.1.1.280.004357
ORF1ab/nsp3760N760NaaCaaT1414D.20.001051
ORF1ab/nsp3760N760NaaCaaT1313AY.450.001582
ORF1ab/nsp3760N760NaaCaaT1313B.1.1.2840.001396
ORF1ab/nsp3760N760NaaCaaT1313B.1.466.20.005086
ORF1ab/nsp3760N760NaaCaaT1313P.1.120.006292
ORF1ab/nsp3760N760NaaCaaT1212AY.260.00034
ORF1ab/nsp3760N760NaaCaaT1212AY.470.000373
ORF1ab/nsp3760N760NaaCaaT1212B.1.2210.000852
ORF1ab/nsp3760N760NaaCaaT1111AY.1190.000388
ORF1ab/nsp3760N760NaaCaaT1111B.1.3780.075342
ORF1ab/nsp3760N760NaaCaaT1010B.1.1.10.003267
ORF1ab/nsp3760N760NaaCaaT1010B.1.1.1580.121951
ORF1ab/nsp3760N760NaaCaaT1010B.1.1.2970.022371
ORF1ab/nsp3760N760NaaCaaT1010B.1.6230.005365
ORF1ab/nsp3760N760NaaCaaT1010R.10.0009
ORF1ab/nsp3760N760NaaCaaT99AY.1110.001648
ORF1ab/nsp3760N760NaaCaaT99AY.130.001449
ORF1ab/nsp3760N760NaaCaaT99AY.140.000792
ORF1ab/nsp3760N760NaaCaaT99AY.39.10.000357
ORF1ab/nsp3760N760NaaCaaT99AY.460.000937
ORF1ab/nsp3760N760NaaCaaT99AY.60.00037
ORF1ab/nsp3760N760NaaCaaT99AY.9.20.000331
ORF1ab/nsp3760N760NaaCaaT99B.1.1.3360.15
ORF1ab/nsp3760N760NaaCaaT99B.1.1.370.001736
ORF1ab/nsp3760N760NaaCaaT88AY.1180.000501
ORF1ab/nsp3760N760NaaCaaT88AY.16.10.003759
ORF1ab/nsp3760N760NaaCaaT88AY.330.000534
ORF1ab/nsp3760N760NaaCaaT88AY.420.000322
ORF1ab/nsp3760N760NaaCaaT88AY.90.000541
ORF1ab/nsp3760N760NaaCaaT88AY.980.000632
ORF1ab/nsp3760N760NaaCaaT88B.1.5430.08
ORF1ab/nsp3760N760NaaCaaT88Q.10.001011
ORF1ab/nsp3760N760NaaCaaT88Q.80.001319
ORF1ab/nsp3760N760NaaCaaT77A.10.001973
ORF1ab/nsp3760N760NaaCaaT77AY.350.001631
ORF1ab/nsp3760N760NaaCaaT77AY.740.00081
ORF1ab/nsp3760N760NaaCaaT77B.1.1600.000218
ORF1ab/nsp3760N760NaaCaaT66AY.360.000889
ORF1ab/nsp3760N760NaaCaaT66AY.480.002791
ORF1ab/nsp3760N760NaaCaaT66AY.9.10.000502
ORF1ab/nsp3760N760NaaCaaT66B.1.1.2140.000333
ORF1ab/nsp3760N760NaaCaaT66B.1.5960.000523
ORF1ab/nsp3760N760NaaCaaT66B.1.617.10.000774
ORF1ab/nsp3760N760NaaCaaT55AY.1060.001674
ORF1ab/nsp3760N760NaaCaaT55AY.1160.001434
ORF1ab/nsp3760N760NaaCaaT55AY.230.000349
ORF1ab/nsp3760N760NaaCaaT55AY.610.000524
ORF1ab/nsp3760N760NaaCaaT55AY.650.002665
ORF1ab/nsp3760N760NaaCaaT55AY.99.20.000461
ORF1ab/nsp3760N760NaaCaaT55B.1.1.2220.00102
ORF1ab/nsp3760N760NaaCaaT55B.1.6200.00473
ORF1ab/nsp3760N760NaaCaaT55B.1.9.30.192308
ORF1ab/nsp3760N760NaaCaaT44AY.1010.001962
ORF1ab/nsp3760N760NaaCaaT44AY.370.001264
ORF1ab/nsp3760N760NaaCaaT44AY.4.40.001637
ORF1ab/nsp3760N760NaaCaaT44B.1.1.3060.001754
ORF1ab/nsp3760N760NaaCaaT44B.1.1.3480.003185
ORF1ab/nsp3760N760NaaCaaT44B.1.1260.005102
ORF1ab/nsp3760N760NaaCaaT44B.1.177.530.009569
ORF1ab/nsp3760N760NaaCaaT44B.1.2410.003247
ORF1ab/nsp3760N760NaaCaaT44B.1.2430.000278
ORF1ab/nsp3760N760NaaCaaT44B.1.258.140.003922
ORF1ab/nsp3760N760NaaCaaT44B.1.258.40.013793
ORF1ab/nsp3760N760NaaCaaT44B.1.5610.001588
ORF1ab/nsp3760N760NaaCaaT44B.1.5640.001704
ORF1ab/nsp3760N760NaaCaaT44B.1.5750.001214
ORF1ab/nsp3760N760NaaCaaT44C.350.003096
ORF1ab/nsp3760N760NaaCaaT44W.10.034783
ORF1ab/nsp3760N760NaaCaaT33AY.29.10.000662
ORF1ab/nsp3760N760NaaCaaT33AY.410.000882
ORF1ab/nsp3760N760NaaCaaT33AY.46.60.000217
ORF1ab/nsp3760N760NaaCaaT33AY.600.002814
ORF1ab/nsp3760N760NaaCaaT33B0.000383
ORF1ab/nsp3760N760NaaCaaT33B.1.1.2200.005576
ORF1ab/nsp3760N760NaaCaaT33B.1.1.2550.009091
ORF1ab/nsp3760N760NaaCaaT33B.1.1.3170.001235
ORF1ab/nsp3760N760NaaCaaT33B.1.1.4860.004732
ORF1ab/nsp3760N760NaaCaaT33B.1.1390.002199
ORF1ab/nsp3760N760NaaCaaT33B.1.177.540.001819
ORF1ab/nsp3760N760NaaCaaT33B.1.2060.002447
ORF1ab/nsp3760N760NaaCaaT33B.1.36.170.001482
ORF1ab/nsp3760N760NaaCaaT33B.1.5250.000339
ORF1ab/nsp3760N760NaaCaaT33B.1.6090.001438
ORF1ab/nsp3760N760NaaCaaT33B.1.6280.001057
ORF1ab/nsp3760N760NaaCaaT33P.1.10.000953
ORF1ab/nsp3760N760NaaCaaT22AE.80.000978
ORF1ab/nsp3760N760NaaCaaT22AY.100.00106
ORF1ab/nsp3760N760NaaCaaT22AY.1050.001286
ORF1ab/nsp3760N760NaaCaaT22AY.1070.000932
ORF1ab/nsp3760N760NaaCaaT22AY.190.002281
ORF1ab/nsp3760N760NaaCaaT22AY.3.10.000171
ORF1ab/nsp3760N760NaaCaaT22AY.400.001929
ORF1ab/nsp3760N760NaaCaaT22AY.46.40.000329
ORF1ab/nsp3760N760NaaCaaT22AY.510.001818
ORF1ab/nsp3760N760NaaCaaT22AY.810.003984
ORF1ab/nsp3760N760NaaCaaT22AY.98.10.000097
ORF1ab/nsp3760N760NaaCaaT22AY.990.002099
ORF1ab/nsp3760N760NaaCaaT22B.1.1.2770.001517
ORF1ab/nsp3760N760NaaCaaT22B.1.1.3770.002762
ORF1ab/nsp3760N760NaaCaaT22B.1.1.4330.002849
ORF1ab/nsp3760N760NaaCaaT22B.1.1.4370.020833
ORF1ab/nsp3760N760NaaCaaT22B.1.1.500.001358
ORF1ab/nsp3760N760NaaCaaT22B.1.160.80.002577
ORF1ab/nsp3760N760NaaCaaT22B.1.177.580.002663
ORF1ab/nsp3760N760NaaCaaT22B.1.177.750.002081
ORF1ab/nsp3760N760NaaCaaT22B.1.2320.001075
ORF1ab/nsp3760N760NaaCaaT22B.1.351.20.000605
ORF1ab/nsp3760N760NaaCaaT22B.1.36.190.018519
ORF1ab/nsp3760N760NaaCaaT22B.1.36.290.001035
ORF1ab/nsp3760N760NaaCaaT22B.1.36.70.008
ORF1ab/nsp3760N760NaaCaaT22B.1.438.10.000215
ORF1ab/nsp3760N760NaaCaaT22B.1.4590.008163
ORF1ab/nsp3760N760NaaCaaT22B.1.4990.002101
ORF1ab/nsp3760N760NaaCaaT22B.1.5510.002581
ORF1ab/nsp3760N760NaaCaaT22B.1.5950.000522
ORF1ab/nsp3760N760NaaCaaT22C.230.011628
ORF1ab/nsp3760N760NaaCaaT22P.1.170.000324
ORF1ab/nsp3760N760NaaCaaT22P.1.20.002312
ORF1ab/nsp3760N760NaaCaaT22Q.20.001227
ORF1ab/nsp3760N760NaaCaaT11A.2.30.004739
ORF1ab/nsp3760N760NaaCaaT11A.2.40.003367
ORF1ab/nsp3760N760NaaCaaT11A.23.10.000704
ORF1ab/nsp3760N760NaaCaaT11AW.10.003049
ORF1ab/nsp3760N760NaaCaaT11AY.10.000396
ORF1ab/nsp3760N760NaaCaaT11AY.1040.001984
ORF1ab/nsp3760N760NaaCaaT11AY.1080.001103
ORF1ab/nsp3760N760NaaCaaT11AY.1090.00074
ORF1ab/nsp3760N760NaaCaaT11AY.1130.000142
ORF1ab/nsp3760N760NaaCaaT11AY.180.010101
ORF1ab/nsp3760N760NaaCaaT11AY.210.001898
ORF1ab/nsp3760N760NaaCaaT11AY.240.000431
ORF1ab/nsp3760N760NaaCaaT11AY.300.000396
ORF1ab/nsp3760N760NaaCaaT11AY.320.000532
ORF1ab/nsp3760N760NaaCaaT11AY.340.000097
ORF1ab/nsp3760N760NaaCaaT11AY.46.10.001027
ORF1ab/nsp3760N760NaaCaaT11AY.46.20.000635
ORF1ab/nsp3760N760NaaCaaT11AY.46.50.000198
ORF1ab/nsp3760N760NaaCaaT11AY.5.30.000337
ORF1ab/nsp3760N760NaaCaaT11AY.500.000799
ORF1ab/nsp3760N760NaaCaaT11AY.540.000095
ORF1ab/nsp3760N760NaaCaaT11AY.570.000656
ORF1ab/nsp3760N760NaaCaaT11AY.580.000907
ORF1ab/nsp3760N760NaaCaaT11AY.660.00107
ORF1ab/nsp3760N760NaaCaaT11AY.7.10.000113
ORF1ab/nsp3760N760NaaCaaT11AY.720.001361
ORF1ab/nsp3760N760NaaCaaT11AY.780.001541
ORF1ab/nsp3760N760NaaCaaT11AY.840.000437
ORF1ab/nsp3760N760NaaCaaT11AY.900.000684
ORF1ab/nsp3760N760NaaCaaT11AY.920.000287
ORF1ab/nsp3760N760NaaCaaT11AZ.10.000867
ORF1ab/nsp3760N760NaaCaaT11AZ.50.003509
ORF1ab/nsp3760N760NaaCaaT11B.1.1.100.001115
ORF1ab/nsp3760N760NaaCaaT11B.1.1.1290.009174
ORF1ab/nsp3760N760NaaCaaT11B.1.1.2250.007194
ORF1ab/nsp3760N760NaaCaaT11B.1.1.2410.00207
ORF1ab/nsp3760N760NaaCaaT11B.1.1.2570.009709
ORF1ab/nsp3760N760NaaCaaT11B.1.1.3010.001179
ORF1ab/nsp3760N760NaaCaaT11B.1.1.3040.002809
ORF1ab/nsp3760N760NaaCaaT11B.1.1.3180.000302
ORF1ab/nsp3760N760NaaCaaT11B.1.1.330.000421
ORF1ab/nsp3760N760NaaCaaT11B.1.1.3400.045455
ORF1ab/nsp3760N760NaaCaaT11B.1.1.3690.000446
ORF1ab/nsp3760N760NaaCaaT11B.1.1.3730.02381
ORF1ab/nsp3760N760NaaCaaT11B.1.1.3800.009804
ORF1ab/nsp3760N760NaaCaaT11B.1.1.3890.006061
ORF1ab/nsp3760N760NaaCaaT11B.1.1.390.00051
ORF1ab/nsp3760N760NaaCaaT11B.1.1.4090.002833
ORF1ab/nsp3760N760NaaCaaT11B.1.1.4260.035714
ORF1ab/nsp3760N760NaaCaaT11B.1.1.4620.008621
ORF1ab/nsp3760N760NaaCaaT11B.1.1.5230.001563
ORF1ab/nsp3760N760NaaCaaT11B.1.1.740.00431
ORF1ab/nsp3760N760NaaCaaT11B.1.1150.021739
ORF1ab/nsp3760N760NaaCaaT11B.1.1240.007812
ORF1ab/nsp3760N760NaaCaaT11B.1.177.120.000152
ORF1ab/nsp3760N760NaaCaaT11B.1.177.160.000664
ORF1ab/nsp3760N760NaaCaaT11B.1.177.170.000821
ORF1ab/nsp3760N760NaaCaaT11B.1.177.320.00135
ORF1ab/nsp3760N760NaaCaaT11B.1.177.40.000211
ORF1ab/nsp3760N760NaaCaaT11B.1.177.500.004695
ORF1ab/nsp3760N760NaaCaaT11B.1.177.560.000668
ORF1ab/nsp3760N760NaaCaaT11B.1.177.620.001192
ORF1ab/nsp3760N760NaaCaaT11B.1.177.70.000165
ORF1ab/nsp3760N760NaaCaaT11B.1.177.800.001912
ORF1ab/nsp3760N760NaaCaaT11B.1.2140.003663
ORF1ab/nsp3760N760NaaCaaT11B.1.258.170.000104
ORF1ab/nsp3760N760NaaCaaT11B.1.258.230.02381
ORF1ab/nsp3760N760NaaCaaT11B.1.3110.000275
ORF1ab/nsp3760N760NaaCaaT11B.1.36.180.00042
ORF1ab/nsp3760N760NaaCaaT11B.1.36.270.000763
ORF1ab/nsp3760N760NaaCaaT11B.1.36.380.001642
ORF1ab/nsp3760N760NaaCaaT11B.1.3660.004878
ORF1ab/nsp3760N760NaaCaaT11B.1.3670.000792
ORF1ab/nsp3760N760NaaCaaT11B.1.3690.000285
ORF1ab/nsp3760N760NaaCaaT11B.1.3750.00082
ORF1ab/nsp3760N760NaaCaaT11B.1.3960.000706
ORF1ab/nsp3760N760NaaCaaT11B.1.4090.000781
ORF1ab/nsp3760N760NaaCaaT11B.1.4110.003704
ORF1ab/nsp3760N760NaaCaaT11B.1.4220.000812
ORF1ab/nsp3760N760NaaCaaT11B.1.4280.00102
ORF1ab/nsp3760N760NaaCaaT11B.1.4530.003236
ORF1ab/nsp3760N760NaaCaaT11B.1.4700.001404
ORF1ab/nsp3760N760NaaCaaT11B.1.4970.000315
ORF1ab/nsp3760N760NaaCaaT11B.1.5050.004386
ORF1ab/nsp3760N760NaaCaaT11B.1.5060.02381
ORF1ab/nsp3760N760NaaCaaT11B.1.5170.000427
ORF1ab/nsp3760N760NaaCaaT11B.1.5230.002451
ORF1ab/nsp3760N760NaaCaaT11B.1.5820.000491
ORF1ab/nsp3760N760NaaCaaT11B.1.6000.005848
ORF1ab/nsp3760N760NaaCaaT11B.40.002208
ORF1ab/nsp3760N760NaaCaaT11B.4.10.018868
ORF1ab/nsp3760N760NaaCaaT11C.300.001727
ORF1ab/nsp3760N760NaaCaaT11C.360.000911
ORF1ab/nsp3760N760NaaCaaT11L.20.011364
ORF1ab/nsp3760N760NaaCaaT11P.1.100.000269
ORF1ab/nsp3760N760NaaCaaT11P.1.130.000898
ORF1ab/nsp3760N760NaaCaaT11P.1.150.000232
ORF1ab/nsp3760N760NaaCaaT11P.1.40.000977
ORF1ab/nsp3760N760NaaCaaT11P.70.004367
ORF1ab/nsp3760N760NaaCaaT11Q.30.000145

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.