CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = N1890S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31890N1890SN2708SnonsynaAcaGc59580.9830518387-8389
ORF1ab/nsp31890N1890SN2708SnonsynaACaGT5910.01694928387-8389

Details of the mutation N1890S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31890N1890SaAcaGc5859All0.000011
ORF1ab/nsp31890N1890SaACaGT159All0
ORF1ab/nsp31890N1890SaAcaGc2222B.1.1.70.00002
ORF1ab/nsp31890N1890SaAcaGc33AY.40.000005
ORF1ab/nsp31890N1890SaAcaGc220.111111
ORF1ab/nsp31890N1890SaAcaGc22A.60.010256
ORF1ab/nsp31890N1890SaAcaGc22AY.230.000139
ORF1ab/nsp31890N1890SaAcaGc22B0.000256
ORF1ab/nsp31890N1890SaAcaGc22B.1.1.3480.001592
ORF1ab/nsp31890N1890SaAcaGc22B.1.1770.000026
ORF1ab/nsp31890N1890SaAcaGc22C.370.000232
ORF1ab/nsp31890N1890SaAcaGc11AY.23.10.000417
ORF1ab/nsp31890N1890SaAcaGc11AY.250.000006
ORF1ab/nsp31890N1890SaAcaGc11AY.300.000396
ORF1ab/nsp31890N1890SaAcaGc11AY.430.000004
ORF1ab/nsp31890N1890SaAcaGc11AY.980.000079
ORF1ab/nsp31890N1890SaAcaGc11B.10.000009
ORF1ab/nsp31890N1890SaAcaGc11B.1.10.000018
ORF1ab/nsp31890N1890SaAcaGc11B.1.1.2140.000055
ORF1ab/nsp31890N1890SaAcaGc11B.1.1.3730.02381
ORF1ab/nsp31890N1890SaAcaGc11B.1.1.500.000679
ORF1ab/nsp31890N1890SaAcaGc11B.1.177.770.000726
ORF1ab/nsp31890N1890SaACaGT11B.1.20.000009
ORF1ab/nsp31890N1890SaAcaGc11B.1.258.170.000104
ORF1ab/nsp31890N1890SaAcaGc11B.1.36.270.000763
ORF1ab/nsp31890N1890SaAcaGc11B.1.4040.001302
ORF1ab/nsp31890N1890SaAcaGc11B.1.6050.005952
ORF1ab/nsp31890N1890SaAcaGc11B.1.617.10.000129
ORF1ab/nsp31890N1890SaAcaGc11B.1.617.20.000004
ORF1ab/nsp31890N1890SaAcaGc11P.10.000016
ORF1ab/nsp31890N1890SaAcaGc11P.1.150.000232