CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = N1890H

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31890N1890HN2708HnonsynAacCac430.758387-8389
ORF1ab/nsp31890N1890HN2708HnonsynAaCCaT410.258387-8389

Details of the mutation N1890H within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31890N1890HAacCac34All0.000001
ORF1ab/nsp31890N1890HAaCCaT14All0
ORF1ab/nsp31890N1890HAacCac11AY.1020.000027
ORF1ab/nsp31890N1890HAacCac11AY.260.000028
ORF1ab/nsp31890N1890HAaCCaT11AY.7.20.000559
ORF1ab/nsp31890N1890HAacCac11B.10.000009