CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = N1860N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31860N1860NN2678NsynaaCaaT102541025418297-8299

Details of the mutation N1860N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31860N1860NaaCaaT1025410254All0.001961
ORF1ab/nsp31860N1860NaaCaaT34433443AY.40.005359
ORF1ab/nsp31860N1860NaaCaaT992992B.1.1.70.000888
ORF1ab/nsp31860N1860NaaCaaT885885AY.4.30.744949
ORF1ab/nsp31860N1860NaaCaaT838838AY.4.20.018175
ORF1ab/nsp31860N1860NaaCaaT414414B.1.617.20.001559
ORF1ab/nsp31860N1860NaaCaaT327327AY.430.001449
ORF1ab/nsp31860N1860NaaCaaT212212AY.1030.001316
ORF1ab/nsp31860N1860NaaCaaT201201B.1.360.029326
ORF1ab/nsp31860N1860NaaCaaT184184B.1.3510.00547
ORF1ab/nsp31860N1860NaaCaaT139139AY.440.000846
ORF1ab/nsp31860N1860NaaCaaT138138B.1.1.5250.754098
ORF1ab/nsp31860N1860NaaCaaT127127B.1.20.001118
ORF1ab/nsp31860N1860NaaCaaT124124B.1.1770.001633
ORF1ab/nsp31860N1860NaaCaaT114114B.1.3750.093443
ORF1ab/nsp31860N1860NaaCaaT103103B.1.177.120.015625
ORF1ab/nsp31860N1860NaaCaaT101101B.10.000925
ORF1ab/nsp31860N1860NaaCaaT9090B.1.1.280.028011
ORF1ab/nsp31860N1860NaaCaaT7373P.10.00115
ORF1ab/nsp31860N1860NaaCaaT6868AY.250.000409
ORF1ab/nsp31860N1860NaaCaaT6363B.1.10.001143
ORF1ab/nsp31860N1860NaaCaaT6363B.1.1600.001965
ORF1ab/nsp31860N1860NaaCaaT5555B.1.177.160.036545
ORF1ab/nsp31860N1860NaaCaaT5252B.1.2340.006861
ORF1ab/nsp31860N1860NaaCaaT5151B.1.258.170.005303
ORF1ab/nsp31860N1860NaaCaaT4848AY.360.007114
ORF1ab/nsp31860N1860NaaCaaT4747AY.30.000467
ORF1ab/nsp31860N1860NaaCaaT3939B.1.2430.002714
ORF1ab/nsp31860N1860NaaCaaT3939B.1.4290.000918
ORF1ab/nsp31860N1860NaaCaaT3636AY.1020.000955
ORF1ab/nsp31860N1860NaaCaaT3636AY.200.001399
ORF1ab/nsp31860N1860NaaCaaT3535B.1.1.5190.00139
ORF1ab/nsp31860N1860NaaCaaT3333AY.260.000934
ORF1ab/nsp31860N1860NaaCaaT3333AY.920.00948
ORF1ab/nsp31860N1860NaaCaaT3232AY.1000.001472
ORF1ab/nsp31860N1860NaaCaaT3030AY.390.000741
ORF1ab/nsp31860N1860NaaCaaT3030B.1.6370.002192
ORF1ab/nsp31860N1860NaaCaaT2727B.1.2210.001918
ORF1ab/nsp31860N1860NaaCaaT2727B.1.3110.007414
ORF1ab/nsp31860N1860NaaCaaT2525B.1.1.4830.961538
ORF1ab/nsp31860N1860NaaCaaT2525Q.10.003158
ORF1ab/nsp31860N1860NaaCaaT2323AY.46.10.023614
ORF1ab/nsp31860N1860NaaCaaT2121B.1.214.20.01259
ORF1ab/nsp31860N1860NaaCaaT2121B.1.4270.00106
ORF1ab/nsp31860N1860NaaCaaT1919AY.1100.002141
ORF1ab/nsp31860N1860NaaCaaT1919AY.330.001269
ORF1ab/nsp31860N1860NaaCaaT1919AY.9.20.000698
ORF1ab/nsp31860N1860NaaCaaT1717AY.1210.0023
ORF1ab/nsp31860N1860NaaCaaT1616AY.46.60.001155
ORF1ab/nsp31860N1860NaaCaaT1616AY.98.10.000775
ORF1ab/nsp31860N1860NaaCaaT1616B.1.1.2840.001718
ORF1ab/nsp31860N1860NaaCaaT1414AY.1130.001993
ORF1ab/nsp31860N1860NaaCaaT1414AY.50.000289
ORF1ab/nsp31860N1860NaaCaaT1313AY.140.001144
ORF1ab/nsp31860N1860NaaCaaT1313AY.4.2.10.001937
ORF1ab/nsp31860N1860NaaCaaT1313AY.60.000535
ORF1ab/nsp31860N1860NaaCaaT1313AY.90.000879
ORF1ab/nsp31860N1860NaaCaaT1313B.1.438.31
ORF1ab/nsp31860N1860NaaCaaT1313B.1.5260.000306
ORF1ab/nsp31860N1860NaaCaaT1212AY.470.000373
ORF1ab/nsp31860N1860NaaCaaT1111AY.1190.000388
ORF1ab/nsp31860N1860NaaCaaT1111AY.290.000174
ORF1ab/nsp31860N1860NaaCaaT1111AY.39.10.000436
ORF1ab/nsp31860N1860NaaCaaT1111B.1.1.2140.00061
ORF1ab/nsp31860N1860NaaCaaT1111B.1.36.80.011
ORF1ab/nsp31860N1860NaaCaaT1111B.1.5750.003337
ORF1ab/nsp31860N1860NaaCaaT1010AY.460.001041
ORF1ab/nsp31860N1860NaaCaaT1010B.1.1.40.029762
ORF1ab/nsp31860N1860NaaCaaT1010B.1.4250.02994
ORF1ab/nsp31860N1860NaaCaaT1010C.370.001161
ORF1ab/nsp31860N1860NaaCaaT99B.1.5250.001018
ORF1ab/nsp31860N1860NaaCaaT88AY.1200.000297
ORF1ab/nsp31860N1860NaaCaaT88AY.230.000558
ORF1ab/nsp31860N1860NaaCaaT88AY.420.000322
ORF1ab/nsp31860N1860NaaCaaT88B.1.3980.02381
ORF1ab/nsp31860N1860NaaCaaT77AU.10.008861
ORF1ab/nsp31860N1860NaaCaaT77AY.750.000392
ORF1ab/nsp31860N1860NaaCaaT77AY.9.10.000586
ORF1ab/nsp31860N1860NaaCaaT77B.1.1.3170.002882
ORF1ab/nsp31860N1860NaaCaaT77B.1.177.380.072917
ORF1ab/nsp31860N1860NaaCaaT77B.1.2580.000466
ORF1ab/nsp31860N1860NaaCaaT77B.1.36.290.003621
ORF1ab/nsp31860N1860NaaCaaT77B.1.4560.022876
ORF1ab/nsp31860N1860NaaCaaT66AY.1170.000507
ORF1ab/nsp31860N1860NaaCaaT66AY.240.002586
ORF1ab/nsp31860N1860NaaCaaT66AY.3.10.000512
ORF1ab/nsp31860N1860NaaCaaT66AY.340.000582
ORF1ab/nsp31860N1860NaaCaaT66AY.660.006417
ORF1ab/nsp31860N1860NaaCaaT66B.1.36.220.007246
ORF1ab/nsp31860N1860NaaCaaT66P.1.140.000287
ORF1ab/nsp31860N1860NaaCaaT55AY.1050.003215
ORF1ab/nsp31860N1860NaaCaaT55AY.540.000477
ORF1ab/nsp31860N1860NaaCaaT55AY.610.000524
ORF1ab/nsp31860N1860NaaCaaT55AY.7.10.000564
ORF1ab/nsp31860N1860NaaCaaT55AY.99.20.000461
ORF1ab/nsp31860N1860NaaCaaT55B.1.1.2220.00102
ORF1ab/nsp31860N1860NaaCaaT55B.1.1.3680.015432
ORF1ab/nsp31860N1860NaaCaaT55B.1.177.210.000382
ORF1ab/nsp31860N1860NaaCaaT55B.1.177.870.003639
ORF1ab/nsp31860N1860NaaCaaT55B.1.466.20.001956
ORF1ab/nsp31860N1860NaaCaaT55D.20.000375
ORF1ab/nsp31860N1860NaaCaaT55R.10.00045
ORF1ab/nsp31860N1860NaaCaaT44B.1.1.1590.018692
ORF1ab/nsp31860N1860NaaCaaT44B.1.1.2940.005063
ORF1ab/nsp31860N1860NaaCaaT44B.1.1.330.001684
ORF1ab/nsp31860N1860NaaCaaT44B.1.1.890.024242
ORF1ab/nsp31860N1860NaaCaaT44B.1.177.100.003512
ORF1ab/nsp31860N1860NaaCaaT44B.1.177.600.000874
ORF1ab/nsp31860N1860NaaCaaT44B.1.177.860.000734
ORF1ab/nsp31860N1860NaaCaaT44B.1.617.10.000516
ORF1ab/nsp31860N1860NaaCaaT44B.1.6210.000354
ORF1ab/nsp31860N1860NaaCaaT33AY.1110.000549
ORF1ab/nsp31860N1860NaaCaaT33AY.116.10.000934
ORF1ab/nsp31860N1860NaaCaaT33AY.1180.000188
ORF1ab/nsp31860N1860NaaCaaT33AY.810.005976
ORF1ab/nsp31860N1860NaaCaaT33AY.850.001282
ORF1ab/nsp31860N1860NaaCaaT33AY.980.000237
ORF1ab/nsp31860N1860NaaCaaT33B0.000383
ORF1ab/nsp31860N1860NaaCaaT33B.1.1.2010.073171
ORF1ab/nsp31860N1860NaaCaaT33B.1.1.3120.005736
ORF1ab/nsp31860N1860NaaCaaT33B.1.1390.002199
ORF1ab/nsp31860N1860NaaCaaT33B.1.2390.003663
ORF1ab/nsp31860N1860NaaCaaT33B.1.5820.001472
ORF1ab/nsp31860N1860NaaCaaT33B.1.5960.000261
ORF1ab/nsp31860N1860NaaCaaT33B.1.6090.001438
ORF1ab/nsp31860N1860NaaCaaT33P.1.10.000953
ORF1ab/nsp31860N1860NaaCaaT33P.1.100.000808
ORF1ab/nsp31860N1860NaaCaaT33Q.80.000495
ORF1ab/nsp31860N1860NaaCaaT22AD.20.000438
ORF1ab/nsp31860N1860NaaCaaT22AY.1060.00067
ORF1ab/nsp31860N1860NaaCaaT22AY.1140.000462
ORF1ab/nsp31860N1860NaaCaaT22AY.120.000632
ORF1ab/nsp31860N1860NaaCaaT22AY.23.10.000835
ORF1ab/nsp31860N1860NaaCaaT22AY.270.000129
ORF1ab/nsp31860N1860NaaCaaT22AY.300.000791
ORF1ab/nsp31860N1860NaaCaaT22AY.4.50.000215
ORF1ab/nsp31860N1860NaaCaaT22AY.450.000243
ORF1ab/nsp31860N1860NaaCaaT22AY.46.30.001867
ORF1ab/nsp31860N1860NaaCaaT22AY.5.30.000675
ORF1ab/nsp31860N1860NaaCaaT22AY.510.001818
ORF1ab/nsp31860N1860NaaCaaT22AY.550.001835
ORF1ab/nsp31860N1860NaaCaaT22AY.670.000929
ORF1ab/nsp31860N1860NaaCaaT22AY.840.000875
ORF1ab/nsp31860N1860NaaCaaT22AY.930.000546
ORF1ab/nsp31860N1860NaaCaaT22B.1.1.1890.003026
ORF1ab/nsp31860N1860NaaCaaT22B.1.1.2200.003717
ORF1ab/nsp31860N1860NaaCaaT22B.1.1.370.000386
ORF1ab/nsp31860N1860NaaCaaT22B.1.177.440.001038
ORF1ab/nsp31860N1860NaaCaaT22B.1.177.70.00033
ORF1ab/nsp31860N1860NaaCaaT22B.1.177.830.002963
ORF1ab/nsp31860N1860NaaCaaT22B.1.230.012121
ORF1ab/nsp31860N1860NaaCaaT22B.1.2360.004107
ORF1ab/nsp31860N1860NaaCaaT22B.1.2400.000431
ORF1ab/nsp31860N1860NaaCaaT22B.1.36.170.000988
ORF1ab/nsp31860N1860NaaCaaT22B.1.36.360.001204
ORF1ab/nsp31860N1860NaaCaaT22B.1.438.10.000215
ORF1ab/nsp31860N1860NaaCaaT22B.1.4990.002101
ORF1ab/nsp31860N1860NaaCaaT22B.1.5950.000522
ORF1ab/nsp31860N1860NaaCaaT22B.1.6280.000705
ORF1ab/nsp31860N1860NaaCaaT22C.140.008658
ORF1ab/nsp31860N1860NaaCaaT22P.1.150.000465
ORF1ab/nsp31860N1860NaaCaaT22P.1.70.000639
ORF1ab/nsp31860N1860NaaCaaT22P.70.008734
ORF1ab/nsp31860N1860NaaCaaT22Q.30.00029
ORF1ab/nsp31860N1860NaaCaaT11A.2.50.000499
ORF1ab/nsp31860N1860NaaCaaT11A.40.012821
ORF1ab/nsp31860N1860NaaCaaT11AD.2.10.045455
ORF1ab/nsp31860N1860NaaCaaT11AE.10.011364
ORF1ab/nsp31860N1860NaaCaaT11AU.30.00211
ORF1ab/nsp31860N1860NaaCaaT11AY.1160.000287
ORF1ab/nsp31860N1860NaaCaaT11AY.120.2.10.000498
ORF1ab/nsp31860N1860NaaCaaT11AY.130.000161
ORF1ab/nsp31860N1860NaaCaaT11AY.16.10.00047
ORF1ab/nsp31860N1860NaaCaaT11AY.170.008197
ORF1ab/nsp31860N1860NaaCaaT11AY.180.010101
ORF1ab/nsp31860N1860NaaCaaT11AY.190.00114
ORF1ab/nsp31860N1860NaaCaaT11AY.29.10.000221
ORF1ab/nsp31860N1860NaaCaaT11AY.34.10.00051
ORF1ab/nsp31860N1860NaaCaaT11AY.350.000233
ORF1ab/nsp31860N1860NaaCaaT11AY.370.000316
ORF1ab/nsp31860N1860NaaCaaT11AY.380.000499
ORF1ab/nsp31860N1860NaaCaaT11AY.46.20.000635
ORF1ab/nsp31860N1860NaaCaaT11AY.46.40.000165
ORF1ab/nsp31860N1860NaaCaaT11AY.46.50.000198
ORF1ab/nsp31860N1860NaaCaaT11AY.600.000938
ORF1ab/nsp31860N1860NaaCaaT11AY.640.000595
ORF1ab/nsp31860N1860NaaCaaT11AY.690.000187
ORF1ab/nsp31860N1860NaaCaaT11AY.70.000196
ORF1ab/nsp31860N1860NaaCaaT11AY.730.000665
ORF1ab/nsp31860N1860NaaCaaT11AY.770.001127
ORF1ab/nsp31860N1860NaaCaaT11AY.790.001211
ORF1ab/nsp31860N1860NaaCaaT11AY.820.001357
ORF1ab/nsp31860N1860NaaCaaT11AY.880.000884
ORF1ab/nsp31860N1860NaaCaaT11B.1.1.1280.007092
ORF1ab/nsp31860N1860NaaCaaT11B.1.1.1530.001095
ORF1ab/nsp31860N1860NaaCaaT11B.1.1.2160.00089
ORF1ab/nsp31860N1860NaaCaaT11B.1.1.2770.000759
ORF1ab/nsp31860N1860NaaCaaT11B.1.1.3060.000438
ORF1ab/nsp31860N1860NaaCaaT11B.1.1.3070.002532
ORF1ab/nsp31860N1860NaaCaaT11B.1.1.3110.000358
ORF1ab/nsp31860N1860NaaCaaT11B.1.1.3350.012987
ORF1ab/nsp31860N1860NaaCaaT11B.1.1.3440.010753
ORF1ab/nsp31860N1860NaaCaaT11B.1.1.3540.004386
ORF1ab/nsp31860N1860NaaCaaT11B.1.1.3740.002375
ORF1ab/nsp31860N1860NaaCaaT11B.1.1.3890.006061
ORF1ab/nsp31860N1860NaaCaaT11B.1.1.3980.003226
ORF1ab/nsp31860N1860NaaCaaT11B.1.1.4480.002033
ORF1ab/nsp31860N1860NaaCaaT11B.1.1.700.000341
ORF1ab/nsp31860N1860NaaCaaT11B.1.1570.002985
ORF1ab/nsp31860N1860NaaCaaT11B.1.160.140.002119
ORF1ab/nsp31860N1860NaaCaaT11B.1.160.160.000929
ORF1ab/nsp31860N1860NaaCaaT11B.1.160.260.002421
ORF1ab/nsp31860N1860NaaCaaT11B.1.177.230.003236
ORF1ab/nsp31860N1860NaaCaaT11B.1.177.570.000281
ORF1ab/nsp31860N1860NaaCaaT11B.1.177.730.000566
ORF1ab/nsp31860N1860NaaCaaT11B.1.177.750.001041
ORF1ab/nsp31860N1860NaaCaaT11B.1.2100.002132
ORF1ab/nsp31860N1860NaaCaaT11B.1.2180.005155
ORF1ab/nsp31860N1860NaaCaaT11B.1.2320.000537
ORF1ab/nsp31860N1860NaaCaaT11B.1.258.110.000396
ORF1ab/nsp31860N1860NaaCaaT11B.1.258.70.001912
ORF1ab/nsp31860N1860NaaCaaT11B.1.2930.0125
ORF1ab/nsp31860N1860NaaCaaT11B.1.351.30.000876
ORF1ab/nsp31860N1860NaaCaaT11B.1.36.10.00114
ORF1ab/nsp31860N1860NaaCaaT11B.1.36.100.004785
ORF1ab/nsp31860N1860NaaCaaT11B.1.3610.001289
ORF1ab/nsp31860N1860NaaCaaT11B.1.3800.006623
ORF1ab/nsp31860N1860NaaCaaT11B.1.3960.000706
ORF1ab/nsp31860N1860NaaCaaT11B.1.3990.001934
ORF1ab/nsp31860N1860NaaCaaT11B.1.4280.00102
ORF1ab/nsp31860N1860NaaCaaT11B.1.428.20.033333
ORF1ab/nsp31860N1860NaaCaaT11B.1.4380.006536
ORF1ab/nsp31860N1860NaaCaaT11B.1.4420.035714
ORF1ab/nsp31860N1860NaaCaaT11B.1.4590.004082
ORF1ab/nsp31860N1860NaaCaaT11B.1.4680.005714
ORF1ab/nsp31860N1860NaaCaaT11B.1.4700.001404
ORF1ab/nsp31860N1860NaaCaaT11B.1.5090.000866
ORF1ab/nsp31860N1860NaaCaaT11B.1.5370.02
ORF1ab/nsp31860N1860NaaCaaT11B.1.5760.000907
ORF1ab/nsp31860N1860NaaCaaT11B.1.619.10.000641
ORF1ab/nsp31860N1860NaaCaaT11B.1.621.10.000506
ORF1ab/nsp31860N1860NaaCaaT11B.1.6260.005714
ORF1ab/nsp31860N1860NaaCaaT11C.10.002392
ORF1ab/nsp31860N1860NaaCaaT11C.37.10.002618
ORF1ab/nsp31860N1860NaaCaaT11N.40.004255
ORF1ab/nsp31860N1860NaaCaaT11P.1.120.000484
ORF1ab/nsp31860N1860NaaCaaT11P.1.20.001156
ORF1ab/nsp31860N1860NaaCaaT11P.20.000187
ORF1ab/nsp31860N1860NaaCaaT11Q.40.000455
ORF1ab/nsp31860N1860NaaCaaT11Q.70.001111