CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = N1778del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31778N1778del1N2596del1delaaTaa-310.3333338051-8053
ORF1ab/nsp31778N1778del1N2596del1delAat-at310.3333338051-8053
ORF1ab/nsp31778N1778del1N2596del1delAaT-aC310.3333338051-8053

Details of the mutation N1778del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31778N1778del1aaTaa-13All0
ORF1ab/nsp31778N1778del1Aat-at13All0
ORF1ab/nsp31778N1778del1AaT-aC13All0
ORF1ab/nsp31778N1778del1AaT-aC11B.1.1.460.004367
ORF1ab/nsp31778N1778del1aaTaa-11B.1.617.20.000004
ORF1ab/nsp31778N1778del1Aat-at11D.20.000075