CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = N1778S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31778N1778SN2596SnonsynaAtaGt459245900.9995648051-8053
ORF1ab/nsp31778N1778SN2596SnonsynaATaGC459210.000217778051-8053
ORF1ab/nsp31778N1778SN2596SnonsynAAtTCt459210.000217778051-8053

Details of the mutation N1778S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31778N1778SaAtaGt45904592All0.000878
ORF1ab/nsp31778N1778SAAtTCt14592All0
ORF1ab/nsp31778N1778SaATaGC14592All0
ORF1ab/nsp31778N1778SaAtaGt32663266B.1.351.20.9882
ORF1ab/nsp31778N1778SaAtaGt11181118B.1.351.30.979842
ORF1ab/nsp31778N1778SaAtaGt8484B.1.3510.002497
ORF1ab/nsp31778N1778SaAtaGt2424AY.50.000496
ORF1ab/nsp31778N1778SaAtaGt1919B.1.177.810.003597
ORF1ab/nsp31778N1778SaAtaGt1313B.10.000119
ORF1ab/nsp31778N1778SaAtaGt1313B.1.1.70.000012
ORF1ab/nsp31778N1778SaAtaGt77B.1.20.000062
ORF1ab/nsp31778N1778SaAtaGt66AY.40.000009
ORF1ab/nsp31778N1778SaAtaGt45AY.250.000024
ORF1ab/nsp31778N1778SAAtTCt15AY.250.000006
ORF1ab/nsp31778N1778SaAtaGt44AY.1200.000149
ORF1ab/nsp31778N1778SaAtaGt44B.1.1770.000053
ORF1ab/nsp31778N1778SaAtaGt33AY.430.000013
ORF1ab/nsp31778N1778SaAtaGt33B.1.10.000054
ORF1ab/nsp31778N1778SaAtaGt33B.1.1.2140.000166
ORF1ab/nsp31778N1778SaAtaGt33B.1.1.2220.000612
ORF1ab/nsp31778N1778SaAtaGt22AY.4.20.000043
ORF1ab/nsp31778N1778SaAtaGt11AY.1030.000006
ORF1ab/nsp31778N1778SaAtaGt11AY.1160.000287
ORF1ab/nsp31778N1778SaAtaGt11AY.16.10.00047
ORF1ab/nsp31778N1778SaATaGC11AY.440.000006
ORF1ab/nsp31778N1778SaAtaGt11B.1.1920.009259
ORF1ab/nsp31778N1778SaAtaGt11B.1.2100.002132
ORF1ab/nsp31778N1778SaAtaGt11B.1.2340.000132
ORF1ab/nsp31778N1778SaAtaGt11B.1.351.50.0006
ORF1ab/nsp31778N1778SaAtaGt11B.1.36.80.001
ORF1ab/nsp31778N1778SaAtaGt11B.1.5540.004405
ORF1ab/nsp31778N1778SaAtaGt11B.1.617.10.000129
ORF1ab/nsp31778N1778SaAtaGt11B.1.617.20.000004
ORF1ab/nsp31778N1778SaAtaGt11B.1.6200.000946
ORF1ab/nsp31778N1778SaAtaGt11B.1.90.006173
ORF1ab/nsp31778N1778SaAtaGt11C.370.000116