CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = N1552del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31552N1552del1N2370del1delaaTaa-520.47373-7375
ORF1ab/nsp31552N1552del1N2370del1delAat-at520.47373-7375
ORF1ab/nsp31552N1552del1N2370del1delAaT-aC510.27373-7375

Details of the mutation N1552del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31552N1552del1aaTaa-25All0
ORF1ab/nsp31552N1552del1Aat-at25All0
ORF1ab/nsp31552N1552del1AaT-aC15All0
ORF1ab/nsp31552N1552del1Aat-at22B.1.20.000018
ORF1ab/nsp31552N1552del1aaTaa-22B.1.617.20.000008
ORF1ab/nsp31552N1552del1AaT-aC11B.1.1.70.000001