CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = N1552del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31552N1552delN2370deldelAAT---393917373-7375

Details of the mutation N1552del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31552N1552delAAT---3939All0.000007
ORF1ab/nsp31552N1552delAAT---99B.1.1.70.000008
ORF1ab/nsp31552N1552delAAT---44B.10.000037
ORF1ab/nsp31552N1552delAAT---22AY.750.000112
ORF1ab/nsp31552N1552delAAT---22B.1.617.20.000008
ORF1ab/nsp31552N1552delAAT---11AY.1030.000006
ORF1ab/nsp31552N1552delAAT---11AY.1130.000142
ORF1ab/nsp31552N1552delAAT---11AY.120.20.001285
ORF1ab/nsp31552N1552delAAT---11AY.250.000006
ORF1ab/nsp31552N1552delAAT---11AY.420.00004
ORF1ab/nsp31552N1552delAAT---11AY.430.000004
ORF1ab/nsp31552N1552delAAT---11AY.440.000006
ORF1ab/nsp31552N1552delAAT---11AY.46.60.000072
ORF1ab/nsp31552N1552delAAT---11AY.660.00107
ORF1ab/nsp31552N1552delAAT---11AY.90.000068
ORF1ab/nsp31552N1552delAAT---11B.1.1.2210.010101
ORF1ab/nsp31552N1552delAAT---11B.1.1.4480.002033
ORF1ab/nsp31552N1552delAAT---11B.1.1.460.004367
ORF1ab/nsp31552N1552delAAT---11B.1.1610.017241
ORF1ab/nsp31552N1552delAAT---11B.1.20.000009
ORF1ab/nsp31552N1552delAAT---11B.1.2580.000067
ORF1ab/nsp31552N1552delAAT---11B.1.258.160.001637
ORF1ab/nsp31552N1552delAAT---11B.1.3510.00003
ORF1ab/nsp31552N1552delAAT---11B.1.5610.000397
ORF1ab/nsp31552N1552delAAT---11B.1.6210.000089
ORF1ab/nsp31552N1552delAAT---11C.350.000774
ORF1ab/nsp31552N1552delAAT---11Q.80.000165