CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = N1552K

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31552N1552KN2370KnonsynaaTaaG97890.9175267373-7375
ORF1ab/nsp31552N1552KN2370KnonsynaaTaaA9780.08247427373-7375

Details of the mutation N1552K within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31552N1552KaaTaaG8997All0.000017
ORF1ab/nsp31552N1552KaaTaaA897All0.000002
ORF1ab/nsp31552N1552KaaTaaG4445B.1.20.000387
ORF1ab/nsp31552N1552KaaTaaA145B.1.20.000009
ORF1ab/nsp31552N1552KaaTaaG1313AY.470.000404
ORF1ab/nsp31552N1552KaaTaaG88AY.98.10.000387
ORF1ab/nsp31552N1552KaaTaaG55A.300.714286
ORF1ab/nsp31552N1552KaaTaaG33AY.250.000018
ORF1ab/nsp31552N1552KaaTaaG33AY.40.000005
ORF1ab/nsp31552N1552KaaTaaA33B.10.000027
ORF1ab/nsp31552N1552KaaTaaG22B.1.1.70.000002
ORF1ab/nsp31552N1552KaaTaaG22B.1.3690.00057
ORF1ab/nsp31552N1552KaaTaaA12B.1.617.20.000004
ORF1ab/nsp31552N1552KaaTaaG12B.1.617.20.000004
ORF1ab/nsp31552N1552KaaTaaA11A.2.40.003367
ORF1ab/nsp31552N1552KaaTaaG11AY.200.000039
ORF1ab/nsp31552N1552KaaTaaG11AY.30.00001
ORF1ab/nsp31552N1552KaaTaaG11AY.39.10.00004
ORF1ab/nsp31552N1552KaaTaaG11AY.440.000006
ORF1ab/nsp31552N1552KaaTaaG11AY.50.000021
ORF1ab/nsp31552N1552KaaTaaA11B.1.1.250.000569
ORF1ab/nsp31552N1552KaaTaaG11B.1.2220.001692
ORF1ab/nsp31552N1552KaaTaaG11B.1.3510.00003
ORF1ab/nsp31552N1552KaaTaaG11B.1.6210.000089
ORF1ab/nsp31552N1552KaaTaaA11P.10.000016