CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = N1104N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31104N1104NN1922NsynaaCaaT8620862016029-6031

Details of the mutation N1104N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31104N1104NaaCaaT86208620All0.001649
ORF1ab/nsp31104N1104NaaCaaT20402040AE.80.997555
ORF1ab/nsp31104N1104NaaCaaT16351635B.1.1.70.001464
ORF1ab/nsp31104N1104NaaCaaT838838B.1.6370.061235
ORF1ab/nsp31104N1104NaaCaaT530530AY.1030.003291
ORF1ab/nsp31104N1104NaaCaaT421421AY.40.000655
ORF1ab/nsp31104N1104NaaCaaT298298AY.440.001814
ORF1ab/nsp31104N1104NaaCaaT275275B.1.617.20.001035
ORF1ab/nsp31104N1104NaaCaaT225225AY.200.008745
ORF1ab/nsp31104N1104NaaCaaT184184AY.430.000815
ORF1ab/nsp31104N1104NaaCaaT107107B.1.20.000942
ORF1ab/nsp31104N1104NaaCaaT9191AY.290.001435
ORF1ab/nsp31104N1104NaaCaaT9191P.10.001434
ORF1ab/nsp31104N1104NaaCaaT9090B.10.000824
ORF1ab/nsp31104N1104NaaCaaT7575AY.30.000746
ORF1ab/nsp31104N1104NaaCaaT6767B.1.10.001215
ORF1ab/nsp31104N1104NaaCaaT6565AY.1020.001723
ORF1ab/nsp31104N1104NaaCaaT6565B.1.1770.000856
ORF1ab/nsp31104N1104NaaCaaT5858AY.250.000349
ORF1ab/nsp31104N1104NaaCaaT5151AY.1180.003195
ORF1ab/nsp31104N1104NaaCaaT5151B.1.258.110.020214
ORF1ab/nsp31104N1104NaaCaaT4949AY.470.001524
ORF1ab/nsp31104N1104NaaCaaT4646B.1.2580.003061
ORF1ab/nsp31104N1104NaaCaaT4040AY.260.001132
ORF1ab/nsp31104N1104NaaCaaT4040B.1.1.5190.001588
ORF1ab/nsp31104N1104NaaCaaT3333AY.540.003146
ORF1ab/nsp31104N1104NaaCaaT3333B.1.2320.017732
ORF1ab/nsp31104N1104NaaCaaT3131B.1.5960.002701
ORF1ab/nsp31104N1104NaaCaaT2727B.1.351.30.023663
ORF1ab/nsp31104N1104NaaCaaT2626AY.390.000642
ORF1ab/nsp31104N1104NaaCaaT2424AY.98.10.001162
ORF1ab/nsp31104N1104NaaCaaT2323B.1.1.2220.004692
ORF1ab/nsp31104N1104NaaCaaT2121B.1.4290.000494
ORF1ab/nsp31104N1104NaaCaaT1919B.1.2430.001322
ORF1ab/nsp31104N1104NaaCaaT1919B.1.4270.000959
ORF1ab/nsp31104N1104NaaCaaT1919R.10.00171
ORF1ab/nsp31104N1104NaaCaaT1818AY.1060.006028
ORF1ab/nsp31104N1104NaaCaaT1818B.1.1600.000561
ORF1ab/nsp31104N1104NaaCaaT1818B.1.5260.000423
ORF1ab/nsp31104N1104NaaCaaT1717AY.60.000699
ORF1ab/nsp31104N1104NaaCaaT1717B.1.466.20.006651
ORF1ab/nsp31104N1104NaaCaaT1717B.1.5750.005158
ORF1ab/nsp31104N1104NaaCaaT1717C.370.001973
ORF1ab/nsp31104N1104NaaCaaT1616AY.1000.000736
ORF1ab/nsp31104N1104NaaCaaT1616AY.1200.000595
ORF1ab/nsp31104N1104NaaCaaT1616B.1.1.3060.007014
ORF1ab/nsp31104N1104NaaCaaT1616B.1.1.750.170213
ORF1ab/nsp31104N1104NaaCaaT1515AY.1190.00053
ORF1ab/nsp31104N1104NaaCaaT1515AY.99.20.001382
ORF1ab/nsp31104N1104NaaCaaT1515Q.80.002474
ORF1ab/nsp31104N1104NaaCaaT1414AY.230.000976
ORF1ab/nsp31104N1104NaaCaaT1414AY.50.000289
ORF1ab/nsp31104N1104NaaCaaT1414B.1.3510.000416
ORF1ab/nsp31104N1104NaaCaaT1414B.1.5380.112903
ORF1ab/nsp31104N1104NaaCaaT1414B.1.6090.006711
ORF1ab/nsp31104N1104NaaCaaT1313AY.1130.001851
ORF1ab/nsp31104N1104NaaCaaT1313B.1.1.2970.029083
ORF1ab/nsp31104N1104NaaCaaT1212B.1.360.001751
ORF1ab/nsp31104N1104NaaCaaT1111AY.120.10.003531
ORF1ab/nsp31104N1104NaaCaaT1111P.1.140.000526
ORF1ab/nsp31104N1104NaaCaaT1010AY.3.10.000853
ORF1ab/nsp31104N1104NaaCaaT1010AY.700.002085
ORF1ab/nsp31104N1104NaaCaaT1010AY.9.20.000367
ORF1ab/nsp31104N1104NaaCaaT1010B.1.177.860.001835
ORF1ab/nsp31104N1104NaaCaaT1010B.1.36.180.004202
ORF1ab/nsp31104N1104NaaCaaT1010P.1.150.002323
ORF1ab/nsp31104N1104NaaCaaT88AY.70.001568
ORF1ab/nsp31104N1104NaaCaaT88B.1.258.170.000832
ORF1ab/nsp31104N1104NaaCaaT88B.1.36.310.014011
ORF1ab/nsp31104N1104NaaCaaT88B.1.617.10.001032
ORF1ab/nsp31104N1104NaaCaaT77AY.370.002212
ORF1ab/nsp31104N1104NaaCaaT77AY.4.2.10.001043
ORF1ab/nsp31104N1104NaaCaaT77AY.460.000729
ORF1ab/nsp31104N1104NaaCaaT77AY.850.00299
ORF1ab/nsp31104N1104NaaCaaT77AY.9.10.000586
ORF1ab/nsp31104N1104NaaCaaT77AY.920.002011
ORF1ab/nsp31104N1104NaaCaaT77B.1.177.120.001062
ORF1ab/nsp31104N1104NaaCaaT77B.1.177.210.000535
ORF1ab/nsp31104N1104NaaCaaT77B.1.177.650.004657
ORF1ab/nsp31104N1104NaaCaaT77D.20.000525
ORF1ab/nsp31104N1104NaaCaaT66AY.1210.000812
ORF1ab/nsp31104N1104NaaCaaT66AY.270.000388
ORF1ab/nsp31104N1104NaaCaaT66AY.4.20.00013
ORF1ab/nsp31104N1104NaaCaaT66AY.420.000241
ORF1ab/nsp31104N1104NaaCaaT66AY.980.000474
ORF1ab/nsp31104N1104NaaCaaT66B0.000767
ORF1ab/nsp31104N1104NaaCaaT66B.1.1.3760.035714
ORF1ab/nsp31104N1104NaaCaaT66B.1.351.20.001815
ORF1ab/nsp31104N1104NaaCaaT66B.1.6210.000531
ORF1ab/nsp31104N1104NaaCaaT55AY.140.00044
ORF1ab/nsp31104N1104NaaCaaT55AY.39.10.000198
ORF1ab/nsp31104N1104NaaCaaT55AY.580.004537
ORF1ab/nsp31104N1104NaaCaaT55AY.750.00028
ORF1ab/nsp31104N1104NaaCaaT55AY.75.10.000902
ORF1ab/nsp31104N1104NaaCaaT55AY.770.005637
ORF1ab/nsp31104N1104NaaCaaT55B.1.1.280.001556
ORF1ab/nsp31104N1104NaaCaaT55B.1.1.630.001929
ORF1ab/nsp31104N1104NaaCaaT55N.50.008834
ORF1ab/nsp31104N1104NaaCaaT44AY.39.1.10.002899
ORF1ab/nsp31104N1104NaaCaaT44AY.4.40.001637
ORF1ab/nsp31104N1104NaaCaaT44AY.610.000419
ORF1ab/nsp31104N1104NaaCaaT44AY.990.004197
ORF1ab/nsp31104N1104NaaCaaT44B.1.1.2140.000222
ORF1ab/nsp31104N1104NaaCaaT44B.1.1.250.002274
ORF1ab/nsp31104N1104NaaCaaT44B.1.1.2840.00043
ORF1ab/nsp31104N1104NaaCaaT44B.1.1.390.002039
ORF1ab/nsp31104N1104NaaCaaT44B.1.177.320.005398
ORF1ab/nsp31104N1104NaaCaaT44B.1.2340.000528
ORF1ab/nsp31104N1104NaaCaaT44B.1.5250.000453
ORF1ab/nsp31104N1104NaaCaaT44B.1.5580.018265
ORF1ab/nsp31104N1104NaaCaaT44B.60.00364
ORF1ab/nsp31104N1104NaaCaaT33AY.1100.000338
ORF1ab/nsp31104N1104NaaCaaT33AY.1170.000254
ORF1ab/nsp31104N1104NaaCaaT33AY.16.10.00141
ORF1ab/nsp31104N1104NaaCaaT33AY.240.001293
ORF1ab/nsp31104N1104NaaCaaT33AY.350.000699
ORF1ab/nsp31104N1104NaaCaaT33AY.360.000445
ORF1ab/nsp31104N1104NaaCaaT33AY.450.000365
ORF1ab/nsp31104N1104NaaCaaT33B.1.1.10.00098
ORF1ab/nsp31104N1104NaaCaaT33B.1.1.1110.044118
ORF1ab/nsp31104N1104NaaCaaT33B.1.1.3010.003538
ORF1ab/nsp31104N1104NaaCaaT33B.1.1.3480.002389
ORF1ab/nsp31104N1104NaaCaaT33B.1.177.160.001993
ORF1ab/nsp31104N1104NaaCaaT33B.1.177.60.00293
ORF1ab/nsp31104N1104NaaCaaT33B.1.177.600.000655
ORF1ab/nsp31104N1104NaaCaaT33B.1.2650.003812
ORF1ab/nsp31104N1104NaaCaaT33B.1.3620.004622
ORF1ab/nsp31104N1104NaaCaaT33B.1.3770.013699
ORF1ab/nsp31104N1104NaaCaaT33B.1.4000.001287
ORF1ab/nsp31104N1104NaaCaaT33B.1.438.10.000322
ORF1ab/nsp31104N1104NaaCaaT33B.1.5680.003333
ORF1ab/nsp31104N1104NaaCaaT33B.1.6120.007958
ORF1ab/nsp31104N1104NaaCaaT33B.1.6310.010101
ORF1ab/nsp31104N1104NaaCaaT33W.20.014493
ORF1ab/nsp31104N1104NaaCaaT22AB.10.016393
ORF1ab/nsp31104N1104NaaCaaT22AM.40.007143
ORF1ab/nsp31104N1104NaaCaaT22AY.1070.000932
ORF1ab/nsp31104N1104NaaCaaT22AY.1140.000462
ORF1ab/nsp31104N1104NaaCaaT22AY.1160.000574
ORF1ab/nsp31104N1104NaaCaaT22AY.116.10.000623
ORF1ab/nsp31104N1104NaaCaaT22AY.320.001065
ORF1ab/nsp31104N1104NaaCaaT22AY.330.000134
ORF1ab/nsp31104N1104NaaCaaT22AY.380.000999
ORF1ab/nsp31104N1104NaaCaaT22AY.46.60.000144
ORF1ab/nsp31104N1104NaaCaaT22AY.710.00095
ORF1ab/nsp31104N1104NaaCaaT22AY.740.000231
ORF1ab/nsp31104N1104NaaCaaT22AY.820.002714
ORF1ab/nsp31104N1104NaaCaaT22AY.950.001522
ORF1ab/nsp31104N1104NaaCaaT22B.1.1.1570.001826
ORF1ab/nsp31104N1104NaaCaaT22B.1.1.2160.001781
ORF1ab/nsp31104N1104NaaCaaT22B.1.1.4340.000697
ORF1ab/nsp31104N1104NaaCaaT22B.1.1.580.010753
ORF1ab/nsp31104N1104NaaCaaT22B.1.1570.00597
ORF1ab/nsp31104N1104NaaCaaT22B.1.160.90.014388
ORF1ab/nsp31104N1104NaaCaaT22B.1.1620.01005
ORF1ab/nsp31104N1104NaaCaaT22B.1.177.540.001213
ORF1ab/nsp31104N1104NaaCaaT22B.1.177.810.000379
ORF1ab/nsp31104N1104NaaCaaT22B.1.2410.001623
ORF1ab/nsp31104N1104NaaCaaT22B.1.258.220.005333
ORF1ab/nsp31104N1104NaaCaaT22B.1.5460.007407
ORF1ab/nsp31104N1104NaaCaaT22C.36.30.001134
ORF1ab/nsp31104N1104NaaCaaT22P.1.120.000968
ORF1ab/nsp31104N1104NaaCaaT22P.1.160.000748
ORF1ab/nsp31104N1104NaaCaaT22P.1.170.000324
ORF1ab/nsp31104N1104NaaCaaT22P.1.40.001953
ORF1ab/nsp31104N1104NaaCaaT22P.1.70.000639
ORF1ab/nsp31104N1104NaaCaaT22P.20.000373
ORF1ab/nsp31104N1104NaaCaaT22Q.10.000253
ORF1ab/nsp31104N1104NaaCaaT11A.10.000282
ORF1ab/nsp31104N1104NaaCaaT11A.190.009434
ORF1ab/nsp31104N1104NaaCaaT11A.23.10.000704
ORF1ab/nsp31104N1104NaaCaaT11A.250.018182
ORF1ab/nsp31104N1104NaaCaaT11AD.20.000219
ORF1ab/nsp31104N1104NaaCaaT11AE.70.083333
ORF1ab/nsp31104N1104NaaCaaT11AW.10.003049
ORF1ab/nsp31104N1104NaaCaaT11AY.1040.001984
ORF1ab/nsp31104N1104NaaCaaT11AY.1080.001103
ORF1ab/nsp31104N1104NaaCaaT11AY.1090.00074
ORF1ab/nsp31104N1104NaaCaaT11AY.120.000316
ORF1ab/nsp31104N1104NaaCaaT11AY.130.000161
ORF1ab/nsp31104N1104NaaCaaT11AY.160.00038
ORF1ab/nsp31104N1104NaaCaaT11AY.23.10.000417
ORF1ab/nsp31104N1104NaaCaaT11AY.29.10.000221
ORF1ab/nsp31104N1104NaaCaaT11AY.300.000396
ORF1ab/nsp31104N1104NaaCaaT11AY.4.30.000842
ORF1ab/nsp31104N1104NaaCaaT11AY.4.50.000107
ORF1ab/nsp31104N1104NaaCaaT11AY.400.000964
ORF1ab/nsp31104N1104NaaCaaT11AY.46.50.000198
ORF1ab/nsp31104N1104NaaCaaT11AY.480.000465
ORF1ab/nsp31104N1104NaaCaaT11AY.5.30.000337
ORF1ab/nsp31104N1104NaaCaaT11AY.550.000917
ORF1ab/nsp31104N1104NaaCaaT11AY.7.10.000113
ORF1ab/nsp31104N1104NaaCaaT11AY.930.000273
ORF1ab/nsp31104N1104NaaCaaT11AZ.20.000821
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.1210.002427
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.1410.002012
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.1610.003534
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.1700.001247
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.1740.003378
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.2650.003155
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.2690.001353
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.2770.000759
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.2790.001121
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.2880.001916
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.2900.018182
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.3030.002762
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.3280.016949
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.330.000421
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.3510.002793
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.3630.005988
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.3690.000446
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.3960.045455
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.3970.002252
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.4020.011111
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.4870.005587
ORF1ab/nsp31104N1104NaaCaaT11B.1.1.540.003021
ORF1ab/nsp31104N1104NaaCaaT11B.1.1280.000635
ORF1ab/nsp31104N1104NaaCaaT11B.1.1390.000733
ORF1ab/nsp31104N1104NaaCaaT11B.1.1470.000756
ORF1ab/nsp31104N1104NaaCaaT11B.1.160.140.002119
ORF1ab/nsp31104N1104NaaCaaT11B.1.1650.011905
ORF1ab/nsp31104N1104NaaCaaT11B.1.1700.00431
ORF1ab/nsp31104N1104NaaCaaT11B.1.177.230.003236
ORF1ab/nsp31104N1104NaaCaaT11B.1.177.240.001295
ORF1ab/nsp31104N1104NaaCaaT11B.1.177.330.001645
ORF1ab/nsp31104N1104NaaCaaT11B.1.177.570.000281
ORF1ab/nsp31104N1104NaaCaaT11B.1.177.70.000165
ORF1ab/nsp31104N1104NaaCaaT11B.1.177.830.001481
ORF1ab/nsp31104N1104NaaCaaT11B.1.177.870.000728
ORF1ab/nsp31104N1104NaaCaaT11B.1.2100.002132
ORF1ab/nsp31104N1104NaaCaaT11B.1.2110.025
ORF1ab/nsp31104N1104NaaCaaT11B.1.214.20.0006
ORF1ab/nsp31104N1104NaaCaaT11B.1.2190.009434
ORF1ab/nsp31104N1104NaaCaaT11B.1.221.10.002907
ORF1ab/nsp31104N1104NaaCaaT11B.1.2390.001221
ORF1ab/nsp31104N1104NaaCaaT11B.1.2790.000514
ORF1ab/nsp31104N1104NaaCaaT11B.1.3110.000275
ORF1ab/nsp31104N1104NaaCaaT11B.1.3200.001245
ORF1ab/nsp31104N1104NaaCaaT11B.1.3250.006897
ORF1ab/nsp31104N1104NaaCaaT11B.1.36.190.009259
ORF1ab/nsp31104N1104NaaCaaT11B.1.36.80.001
ORF1ab/nsp31104N1104NaaCaaT11B.1.3670.000792
ORF1ab/nsp31104N1104NaaCaaT11B.1.4030.003268
ORF1ab/nsp31104N1104NaaCaaT11B.1.4200.010417
ORF1ab/nsp31104N1104NaaCaaT11B.1.4260.001009
ORF1ab/nsp31104N1104NaaCaaT11B.1.4390.005917
ORF1ab/nsp31104N1104NaaCaaT11B.1.440.008333
ORF1ab/nsp31104N1104NaaCaaT11B.1.4740.001901
ORF1ab/nsp31104N1104NaaCaaT11B.1.4800.002488
ORF1ab/nsp31104N1104NaaCaaT11B.1.5160.001957
ORF1ab/nsp31104N1104NaaCaaT11B.1.5510.00129
ORF1ab/nsp31104N1104NaaCaaT11B.1.5760.000907
ORF1ab/nsp31104N1104NaaCaaT11B.1.5800.004065
ORF1ab/nsp31104N1104NaaCaaT11B.1.5820.000491
ORF1ab/nsp31104N1104NaaCaaT11B.1.5880.00091
ORF1ab/nsp31104N1104NaaCaaT11B.1.5890.007576
ORF1ab/nsp31104N1104NaaCaaT11B.1.6250.002353
ORF1ab/nsp31104N1104NaaCaaT11B.1.760.011364
ORF1ab/nsp31104N1104NaaCaaT11B.1.90.006173
ORF1ab/nsp31104N1104NaaCaaT11B.1.910.002075
ORF1ab/nsp31104N1104NaaCaaT11B.1.940.027027
ORF1ab/nsp31104N1104NaaCaaT11B.100.008264
ORF1ab/nsp31104N1104NaaCaaT11B.400.000364
ORF1ab/nsp31104N1104NaaCaaT11C.160.00106
ORF1ab/nsp31104N1104NaaCaaT11C.180.002591
ORF1ab/nsp31104N1104NaaCaaT11C.350.000774
ORF1ab/nsp31104N1104NaaCaaT11P.1.10.000318
ORF1ab/nsp31104N1104NaaCaaT11P.1.130.000898
ORF1ab/nsp31104N1104NaaCaaT11P.1.20.001156
ORF1ab/nsp31104N1104NaaCaaT11Q.40.000455