CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : Mut = N1080S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31080N1080SN1898SnonsynaAtaGt4974930.9919525957-5959
ORF1ab/nsp31080N1080SN1898SnonsynAAtTCt49730.006036225957-5959
ORF1ab/nsp31080N1080SN1898SnonsynAATTCC49710.002012075957-5959

Details of the mutation N1080S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31080N1080SaAtaGt493497All0.000094
ORF1ab/nsp31080N1080SAAtTCt3497All0.000001
ORF1ab/nsp31080N1080SAATTCC1497All0
ORF1ab/nsp31080N1080SaAtaGt269269B.1.1.440.648193
ORF1ab/nsp31080N1080SaAtaGt104104B.1.1.70.000093
ORF1ab/nsp31080N1080SaAtaGt3333AY.40.000051
ORF1ab/nsp31080N1080SaAtaGt3232AY.140.002816
ORF1ab/nsp31080N1080SaAtaGt66B.1.36.170.002964
ORF1ab/nsp31080N1080SaAtaGt56B.1.617.20.000019
ORF1ab/nsp31080N1080SAAtTCt16B.1.617.20.000004
ORF1ab/nsp31080N1080SaAtaGt55AY.200.000194
ORF1ab/nsp31080N1080SaAtaGt33AY.440.000018
ORF1ab/nsp31080N1080SaAtaGt33B.10.000027
ORF1ab/nsp31080N1080SaAtaGt33B.1.4290.000071
ORF1ab/nsp31080N1080SAATTCC12AY.1020.000027
ORF1ab/nsp31080N1080SAAtTCt12AY.1020.000027
ORF1ab/nsp31080N1080SaAtaGt22B.1.1.280.000622
ORF1ab/nsp31080N1080SaAtaGt22B.1.1770.000026
ORF1ab/nsp31080N1080SaAtaGt22P.20.000373
ORF1ab/nsp31080N1080SaAtaGt11AY.1030.000006
ORF1ab/nsp31080N1080SaAtaGt11AY.1090.00074
ORF1ab/nsp31080N1080SaAtaGt11AY.1130.000142
ORF1ab/nsp31080N1080SaAtaGt11AY.1140.000231
ORF1ab/nsp31080N1080SaAtaGt11AY.120.10.000321
ORF1ab/nsp31080N1080SaAtaGt11AY.250.000006
ORF1ab/nsp31080N1080SaAtaGt11AY.270.000065
ORF1ab/nsp31080N1080SaAtaGt11AY.30.00001
ORF1ab/nsp31080N1080SaAtaGt11AY.360.000148
ORF1ab/nsp31080N1080SaAtaGt11AY.390.000025
ORF1ab/nsp31080N1080SaAtaGt11AY.750.000056
ORF1ab/nsp31080N1080SaAtaGt11AY.850.000427
ORF1ab/nsp31080N1080SAAtTCt11AY.9.20.000037
ORF1ab/nsp31080N1080SaAtaGt11AY.980.000079
ORF1ab/nsp31080N1080SaAtaGt11B.1.1.1410.002012
ORF1ab/nsp31080N1080SaAtaGt11B.1.1.2000.007463
ORF1ab/nsp31080N1080SaAtaGt11B.1.1.4340.000349
ORF1ab/nsp31080N1080SaAtaGt11B.1.1.740.00431
ORF1ab/nsp31080N1080SaAtaGt11B.1.1570.002985
ORF1ab/nsp31080N1080SaAtaGt11B.1.3510.00003
ORF1ab/nsp31080N1080SaAtaGt11B.1.351.20.000303
ORF1ab/nsp31080N1080SaAtaGt11B.1.360.000146
ORF1ab/nsp31080N1080SaAtaGt11B.1.4970.000315
ORF1ab/nsp31080N1080SaAtaGt11C.140.004329
ORF1ab/nsp31080N1080SaAtaGt11P.10.000016